Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921408|Adiantum capillus-veneris mRNA, clone: YMU001_000149_E04. (542 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P15629|POL_SOCMV Enzymatic polyprotein OS=Soybean chlorotic m... 56 1e-07 sp|Q7TD08|POL_CYLCV Enzymatic polyprotein OS=Cestrum yellow leaf... 44 4e-04 sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra... 44 5e-04 sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot... 43 0.001 sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from tra... 43 0.001 sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from tra... 42 0.002 sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot... 42 0.003 sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot... 42 0.003 sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra... 40 0.006 sp|O94316|SN114_SCHPO 114 kDa U5 small nuclear ribonucleoprotein... 31 4.5 sp|P24876|ATP6_ASCSU ATP synthase subunit a OS=Ascaris suum GN=A... 31 4.5 sp|Q89AY1|DAPE_BUCBP Succinyl-diaminopimelate desuccinylase OS=B... 30 9.9
>sp|P15629|POL_SOCMV Enzymatic polyprotein OS=Soybean chlorotic mottle virus GN=ORF V PE=3 SV=2 Length = 692
Score = 56.2 bits (134), Expect = 1e-07 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKV-HSFLSGFSGYNQLTIHP*DQNRVAFATT 88 +N KK+N TIGD+Y LP +LE++ G + S L SGY QL +H + AF+ Sbjct: 261 INYKKMNEATIGDSYKLPRKDFILEKIKGSLWFSSLDAKSGYYQLRLHENTKPLTAFSCP 320
Query: 87 EWGIFTYCVMSYGMTNAPTI 28 + + V+S+G+ AP+I Sbjct: 321 PQKHYEWNVLSFGLKQAPSI 340
>sp|Q7TD08|POL_CYLCV Enzymatic polyprotein OS=Cestrum yellow leaf curling virus GN=ORF V PE=3 SV=1 Length = 643
Score = 44.3 bits (103), Expect = 4e-04 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKV-HSFLSGFSGYNQLTIHP*DQNRVAFATT 88 +N K +N TIG+ + LP +L +V G S L SGY QL +HP + AF+ Sbjct: 260 INYKALNKATIGNAHKLPRIDSILTKVKGSNWFSTLDAKSGYWQLRLHPQSKPLTAFSCP 319
Query: 87 EWGIFTYCVMSYGMTNAPTI 28 + + V+ +G+ AP I Sbjct: 320 PQKHYQWNVLPFGLKQAPGI 339
>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4 SV=1 Length = 1058
Score = 43.9 bits (102), Expect = 5e-04 Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 2/79 (2%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVHSF--LSGFSGYNQLTIHP*DQNRVAFAT 91 ++ +K+N T+GD +P+P +L + +G+ + F + G++Q+ + P ++ AF + Sbjct: 266 IDYRKLNEITVGDRHPIPNMDEILGK-LGRCNYFTTIDLAKGFHQIEMDPESVSKTAF-S 323
Query: 90 TEWGIFTYCVMSYGMTNAP 34 T+ G + Y M +G+ NAP Sbjct: 324 TKHGHYEYLRMPFGLKNAP 342
>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1 Length = 1333
Score = 42.7 bits (99), Expect = 0.001 Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGK-VHSFLSGFSGYNQLTIHP*DQNRVAFATT 88 V+ K +N + YPLP+ + +L ++ G + + L S Y+ + + D++++AF Sbjct: 466 VDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCP 525
Query: 87 EWGIFTYCVMSYGMTNAP 34 G+F Y VM YG++ AP Sbjct: 526 R-GVFEYLVMPYGISTAP 542
>sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster GN=pol PE=4 SV=1 Length = 1035
Score = 42.7 bits (99), Expect = 0.001 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVHSF--LSGFSGYNQLTIHP*DQNRVAFAT 91 ++ +K+N TI D YP+P +L +GK F L SGY+Q+ + D+ + +F + Sbjct: 241 IDFRKLNEKTIPDRYPMPSIPMILAN-LGKAKFFTTLDLKSGYHQIYLAEHDREKTSF-S 298
Query: 90 TEWGIFTYCVMSYGMTNAPTI 28 G + +C + +G+ NA +I Sbjct: 299 VNGGKYEFCRLPFGLRNASSI 319
>sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster GN=pol PE=4 SV=1 Length = 1003
Score = 42.0 bits (97), Expect = 0.002 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERV-VGKVHSFLSGFSGYNQLTIHP*DQNRVAFATT 88 V+ K++NT TI D YP+P L + K + L SG++Q+ + D + AF+T Sbjct: 182 VDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTL 241
Query: 87 EWGIFTYCVMSYGMTNAPTI 28 G + + + +G+ NAP I Sbjct: 242 N-GKYEFLRLPFGLKNAPAI 260
>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1 Length = 1333
Score = 41.6 bits (96), Expect = 0.003 Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGK-VHSFLSGFSGYNQLTIHP*DQNRVAFATT 88 V+ K +N + YPLP+ + +L ++ G + + L S Y+ + + D++++AF Sbjct: 466 VDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCP 525
Query: 87 EWGIFTYCVMSYGMTNAP 34 G+F Y VM YG++ AP Sbjct: 526 R-GVFEYLVMPYGISIAP 542
>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1 Length = 1333
Score = 41.6 bits (96), Expect = 0.003 Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGK-VHSFLSGFSGYNQLTIHP*DQNRVAFATT 88 V+ K +N + YPLP+ + +L ++ G + + L S Y+ + + D++++AF Sbjct: 466 VDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCP 525
Query: 87 EWGIFTYCVMSYGMTNAP 34 G+F Y VM YG++ AP Sbjct: 526 R-GVFEYLVMPYGISIAP 542
>sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=4 SV=1 Length = 1059
Score = 40.4 bits (93), Expect = 0.006 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVHSF--LSGFSGYNQLTIHP*DQNRVAFAT 91 ++ +K+N TI D YP+P +L + +GK F + G++Q+ + ++ AF+T Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGK-LGKCQYFTTIDLAKGFHQIEMDEESISKTAFST 323
Query: 90 TEWGIFTYCVMSYGMTNAP 34 G + Y M +G+ NAP Sbjct: 324 KS-GHYEYLRMPFGLRNAP 341
>sp|O94316|SN114_SCHPO 114 kDa U5 small nuclear ribonucleoprotein component homolog OS=Schizosaccharomyces pombe GN=cwf10 PE=1 SV=1 Length = 983
Score = 30.8 bits (68), Expect = 4.5 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Frame = -2
Query: 436 DLLAYYTHEEDLKPT*QRSYKYNETF---ARRIKEIYKVTKVEFIYEIKYTDWVFYIVD 269 DLL YYTH D KP +RS +Y +T R+ I + ++K + F +D Sbjct: 158 DLLVYYTH-PDTKPPKRRSLRYTDTHYLERERVMSIKSTPLTLAVSDMKGKTFAFQCID 215
|
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921408|Adiantum capillus-veneris mRNA, clone: YMU001_000149_E04. (542 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5BSK0|A5BSK0_VITVI Putative uncharacterized protein OS=Vitis... 57 6e-12 tr|Q5W798|Q5W798_ORYSJ Putative polyprotein OS=Oryza sativa subs... 65 4e-11 tr|Q5W6X6|Q5W6X6_ORYSJ Putative polyprotein OS=Oryza sativa subs... 65 4e-11 tr|Q946T2|Q946T2_PEA Reverse transcriptase (Fragment) OS=Pisum s... 69 5e-11 tr|Q946T3|Q946T3_PEA Reverse transcriptase (Fragment) OS=Pisum s... 68 6e-11 tr|Q946T4|Q946T4_PEA Reverse transcriptase (Fragment) OS=Pisum s... 70 7e-11 tr|Q946U3|Q946U3_AVESA Reverse transcriptase (Fragment) OS=Avena... 63 8e-11 tr|Q9M0T8|Q9M0T8_ARATH Putative athila transposon protein OS=Ara... 63 1e-10 tr|Q2QTI9|Q2QTI9_ORYSJ Retrotransposon protein, putative, Ty3-gy... 64 2e-10 tr|Q946T1|Q946T1_SORBI Reverse transcriptase (Fragment) OS=Sorgh... 65 2e-10 tr|A5AH94|A5AH94_VITVI Putative uncharacterized protein OS=Vitis... 50 2e-10 tr|Q0J6S9|Q0J6S9_ORYSJ Os08g0271300 protein OS=Oryza sativa subs... 56 3e-10 tr|Q946T0|Q946T0_SOYBN Reverse transcriptase (Fragment) OS=Glyci... 65 4e-10 tr|Q946U6|Q946U6_ORYSA Reverse transcriptase (Fragment) OS=Oryza... 62 4e-10 tr|Q946U1|Q946U1_AVESA Reverse transcriptase (Fragment) OS=Avena... 60 5e-10 tr|Q946S9|Q946S9_SOYBN Reverse transcriptase (Fragment) OS=Glyci... 63 6e-10 tr|Q7XQC1|Q7XQC1_ORYSJ OSJNBb0060M15.10 protein (OSJNBb0021I10.3... 62 8e-10 tr|Q7XNX7|Q7XNX7_ORYSJ OSJNBb0026I12.3 protein OS=Oryza sativa s... 67 8e-10 tr|Q2AA50|Q2AA50_ASPOF Retrotransposon gag protein OS=Asparagus ... 66 1e-09 tr|Q2AA42|Q2AA42_ASPOF F7F22.17, putative OS=Asparagus officinal... 66 1e-09 tr|A5C656|A5C656_VITVI Putative uncharacterized protein OS=Vitis... 54 1e-09 tr|Q75H60|Q75H60_ORYSJ Putative reverse transcriptase OS=Oryza s... 65 2e-09 tr|Q10GV1|Q10GV1_ORYSJ Retrotransposon protein, putative, Ty3-gy... 65 2e-09 tr|Q0ZCD0|Q0ZCD0_POPTR Integrase OS=Populus trichocarpa PE=2 SV=1 65 3e-09 tr|Q946U4|Q946U4_HORVU Reverse transcriptase (Fragment) OS=Horde... 59 3e-09 tr|Q946T7|Q946T7_WHEAT Reverse transcriptase (Fragment) OS=Triti... 60 4e-09 tr|Q946T5|Q946T5_GOSHI Reverse transcriptase (Fragment) OS=Gossy... 61 4e-09 tr|Q7X639|Q7X639_ORYSJ OSJNBb0067G11.5 protein OS=Oryza sativa s... 64 5e-09 tr|Q946S8|Q946S8_ARATH Reverse transcriptase (Fragment) OS=Arabi... 62 7e-09 tr|Q946U2|Q946U2_AVESA Reverse transcriptase (Fragment) OS=Avena... 59 7e-09
>tr|A5BSK0|A5BSK0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034374 PE=4 SV=1 Length = 1030
Score = 57.0 bits (136), Expect(3) = 6e-12 Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVG-KVHSFLSGFSGYNQLTIHP*DQNRVAFATT 88 V+ + +N + D++PLP +++ G + SF+ GFSGY+Q+ + P D + +F T Sbjct: 374 VDFRDLNKASPKDDFPLPHIDMLVDSTAGHSMLSFMDGFSGYSQILMAPEDMEKTSF-IT 432
Query: 87 EWGIFTYCVMSYGMTNA 37 EWG + Y VM +G+ NA Sbjct: 433 EWGTYCYRVMPFGLKNA 449
Score = 30.4 bits (67), Expect(3) = 6e-12 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -1
Query: 542 IATDLIQEEEHIHIKILREYRDVFAWS 462 I +DL +E I++LR Y DVFAWS Sbjct: 269 IGSDLSTDERDGLIQLLRSYLDVFAWS 295
Score = 25.8 bits (55), Expect(3) = 6e-12 Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = -2
Query: 400 KPT*QRSYKYNETFARRIKE-IYKVTKVEFIYEIKYTDWVFYIVDV 266 +P Q+ + + ++ ++KE I K V F+ +KY +W+ +V V Sbjct: 318 RPVKQKLRRLHPRWSLQVKEEIQKQLSVGFLSVVKYPEWLANVVPV 363
>tr|Q5W798|Q5W798_ORYSJ Putative polyprotein OS=Oryza sativa subsp. japonica GN=OJ1045_C06.5 PE=4 SV=1 Length = 1005
Score = 65.5 bits (158), Expect(2) = 4e-11 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 3/80 (3%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVHSF---LSGFSGYNQLTIHP*DQNRVAFA 94 ++ +K+N T D++PLP +LER+ HSF L G+SGY+Q+ IHP DQ++ F Sbjct: 747 IDYRKLNKATKKDHFPLPFIDEMLERLAN--HSFFCFLDGYSGYHQIPIHPEDQSKTTF- 803
Query: 93 TTEWGIFTYCVMSYGMTNAP 34 T +G + Y MS+G+ NAP Sbjct: 804 TCPYGTYAYRRMSFGLCNAP 823
Score = 25.4 bits (54), Expect(2) = 4e-11 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2
Query: 346 KEIYKVTKVEFIYEIKYTDWVFYIVDVCQPQKG 248 KE+ K+ IY + Y++WV + V P+KG Sbjct: 692 KEVLKLLHAGIIYPVPYSEWVSPVQVV--PKKG 722
>tr|Q5W6X6|Q5W6X6_ORYSJ Putative polyprotein OS=Oryza sativa subsp. japonica GN=OSJNBa0036C12.21 PE=4 SV=1 Length = 963
Score = 65.5 bits (158), Expect(2) = 4e-11 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 3/80 (3%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVHSF---LSGFSGYNQLTIHP*DQNRVAFA 94 ++ +K+N T D++PLP +LER+ HSF L G+SGY+Q+ IHP DQ++ F Sbjct: 742 IDYRKLNKATKKDHFPLPFIDEMLERLAN--HSFFCFLDGYSGYHQIPIHPEDQSKTTF- 798
Query: 93 TTEWGIFTYCVMSYGMTNAP 34 T +G + Y MS+G+ NAP Sbjct: 799 TCPYGTYAYRRMSFGLCNAP 818
Score = 25.4 bits (54), Expect(2) = 4e-11 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2
Query: 346 KEIYKVTKVEFIYEIKYTDWVFYIVDVCQPQKG 248 KE+ K+ IY + Y++WV + V P+KG Sbjct: 687 KEVLKLLHAGIIYPVPYSEWVSPVQVV--PKKG 717
>tr|Q946T2|Q946T2_PEA Reverse transcriptase (Fragment) OS=Pisum sativum PE=4 SV=1 Length = 254
Score = 68.6 bits (166), Expect(2) = 5e-11 Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 1/78 (1%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGK-VHSFLSGFSGYNQLTIHP*DQNRVAFATT 88 ++ +++NT T D++PLP +LER+ G+ + FL G+SGYNQ+ + P D + AF T Sbjct: 58 IDYRRLNTATRKDHFPLPFMDQMLERLSGQQYYCFLDGYSGYNQIAVDPADHEKTAF-TC 116
Query: 87 EWGIFTYCVMSYGMTNAP 34 +G+F Y M +G+ NAP Sbjct: 117 PFGVFAYRKMPFGLCNAP 134
Score = 22.3 bits (46), Expect(2) = 5e-11 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -2
Query: 346 KEIYKVTKVEFIYEIKYTDWVFYIVDVCQPQKG 248 KE++K+ IY I + WV + V P+KG Sbjct: 3 KEVFKLLDAGMIYPISDSPWVSPVHVV--PKKG 33
>tr|Q946T3|Q946T3_PEA Reverse transcriptase (Fragment) OS=Pisum sativum PE=4 SV=1 Length = 254
Score = 68.2 bits (165), Expect(2) = 6e-11 Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 1/78 (1%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGK-VHSFLSGFSGYNQLTIHP*DQNRVAFATT 88 ++ +++NT T D++PLP +LER+ G+ + FL G+SGYNQ+ + P D + AF T Sbjct: 58 IDYRQLNTATRKDHFPLPFMDQMLERLSGQQYYCFLDGYSGYNQIAVDPVDHEKTAF-TC 116
Query: 87 EWGIFTYCVMSYGMTNAP 34 +G+F Y M +G+ NAP Sbjct: 117 PFGVFAYRKMPFGLCNAP 134
Score = 22.3 bits (46), Expect(2) = 6e-11 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -2
Query: 346 KEIYKVTKVEFIYEIKYTDWVFYIVDVCQPQKG 248 KE++K+ IY I + WV + V P+KG Sbjct: 3 KEVFKLLDAGMIYPISDSPWVSPVHVV--PKKG 33
>tr|Q946T4|Q946T4_PEA Reverse transcriptase (Fragment) OS=Pisum sativum PE=4 SV=1 Length = 254
Score = 70.1 bits (170), Expect = 7e-11 Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVG-KVHSFLSGFSGYNQLTIHP*DQNRVAFATT 88 ++ +++NT T D++PLP +LER+ G + + FL G+SGYNQ+ + P DQ + AF T Sbjct: 58 IDHRRLNTATRKDHFPLPFIDQMLERLAGHEYYCFLDGYSGYNQIVVAPEDQEKTAF-TC 116
Query: 87 EWGIFTYCVMSYGMTNAP 34 +GIF Y M +G+ NAP Sbjct: 117 PYGIFAYRRMPFGLCNAP 134
>tr|Q946U3|Q946U3_AVESA Reverse transcriptase (Fragment) OS=Avena sativa PE=4 SV=1 Length = 254
Score = 62.8 bits (151), Expect(2) = 8e-11 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVH-SFLSGFSGYNQLTIHP*DQNRVAFATT 88 ++ +KVN T D+YPLP +LER K H FL G+SG++Q+ + DQ + F T Sbjct: 58 IDFRKVNKVTKKDHYPLPFIDQMLERFSKKTHFCFLDGYSGFSQIVVKQQDQEKTTF-TC 116
Query: 87 EWGIFTYCVMSYGMTNAPT 31 +G + Y M +G+ NAP+ Sbjct: 117 PYGTYAYRCMPFGLCNAPS 135
Score = 27.3 bits (59), Expect(2) = 8e-11 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -2
Query: 346 KEIYKVTKVEFIYEIKYTDWVFYIVDVCQPQKG 248 KE++K+ IY I ++WV ++ C P+KG Sbjct: 3 KEVFKLMDAGIIYPIADSEWVSHV--HCVPKKG 33
>tr|Q9M0T8|Q9M0T8_ARATH Putative athila transposon protein OS=Arabidopsis thaliana GN=AT4g07660 PE=2 SV=1 Length = 724
Score = 63.2 bits (152), Expect(2) = 1e-10 Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 1/79 (1%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVHS-FLSGFSGYNQLTIHP*DQNRVAFATT 88 ++ +K+N + D++PLP + +LE + +++ FL G+SG+ Q+ IHP DQ + F T Sbjct: 422 IDYRKLNAASRKDHFPLPFTNQMLEGLANHLYNCFLDGYSGFFQIPIHPNDQEKTTF-TC 480
Query: 87 EWGIFTYCVMSYGMTNAPT 31 +G F Y M +G+ NAPT Sbjct: 481 PYGTFAYKRMPFGLCNAPT 499
Score = 26.2 bits (56), Expect(2) = 1e-10 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -2
Query: 346 KEIYKVTKVEFIYEIKYTDWVFYIVDVCQPQKG 248 KEI K+ IY I + WVF + C P+KG Sbjct: 367 KEILKLLDAGVIYPISDSTWVFPV--HCVPKKG 397
>tr|Q2QTI9|Q2QTI9_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os12g19480 PE=4 SV=1 Length = 759
Score = 63.5 bits (153), Expect(2) = 2e-10 Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVH-SFLSGFSGYNQLTIHP*DQNRVAFATT 88 ++ +K+N T D++ LP +LER+ + FL G+SGY+Q+ IHP DQ++ F T Sbjct: 139 IDYRKLNKATKKDHFSLPFIDEMLERLANHSYFCFLDGYSGYHQIPIHPDDQSKTTF-TC 197
Query: 87 EWGIFTYCVMSYGMTNAPTISKDLR 13 +G + Y MS+ + NAP + K L+ Sbjct: 198 PYGTYAYYRMSFRLCNAPNLDKVLQ 222
Score = 25.4 bits (54), Expect(2) = 2e-10 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Frame = -2
Query: 421 YTHEEDL----KPT*QRSYKYNETFARRIK-EIYKVTKVEFIYEIKYTDW 287 YTH + + P+ + + N +K E+ K+ V IY ++Y++W Sbjct: 54 YTHRKPIVPESSPSREPQRQLNNAMREVVKKEVLKLLHVWIIYPVQYSEW 103
>tr|Q946T1|Q946T1_SORBI Reverse transcriptase (Fragment) OS=Sorghum bicolor PE=4 SV=1 Length = 254
Score = 65.5 bits (158), Expect(2) = 2e-10 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 3/80 (3%) Frame = -3
Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVHSF---LSGFSGYNQLTIHP*DQNRVAFA 94 ++ +K+N T D++PLP +LER+ HSF L G+SGY+Q+ IHP DQ++ F Sbjct: 58 IDYRKLNKATRKDHFPLPFIDEMLERLAN--HSFFCFLDGYSGYHQIPIHPDDQSKTTF- 114
Query: 93 TTEWGIFTYCVMSYGMTNAP 34 T +G + Y MS+G+ NAP Sbjct: 115 TCPYGTYAYRRMSFGLCNAP 134
Score = 23.5 bits (49), Expect(2) = 2e-10 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = -2
Query: 346 KEIYKVTKVEFIYEIKYTDWVFYIVDVCQPQKG 248 KE+ K+ IY + +++WV + V P+KG Sbjct: 3 KEVLKLLHAGIIYPVPHSEWVSPVQVV--PKKG 33
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