BP921395 |
Clone id |
YMU001_000149_D02 |
Library |
YMU01 |
Length |
520 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000149_D02. |
Accession |
BP921395 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATAATAGCTCCATTAGCCAGCATGCGGTCGTTTGGGATCTAAAATACTTCTTGATAGCCA GCCTTTAACTGTTATACTCCATTCTTGACCGACCTCTGACAGTCCAAGGATGTGCGATTT CAAGACTTCCTCTGAAAATGGCTCTTGAAACAATAAGGCTGCTGAAGCTTCGGTGATATC CAGATAAACTTCATCAATTGAGGCCCTTTCACAAGTTCCCTTACGAGAAAGAACTGTGAC AACCTCAGAGCCCGCATCACGATACTGTGTCAAGTCTGCTTTACCATGTGCTACAGGAAC CTGCATCAACTCAATATCTGGGCAGACCTTCTTAGCTTCATCTCCACGCATGTTGCGTGT CACTCCAAACTTGCGAGCTTCATACCCTACAGCAATAAGACCACCTCCTTTCCAAAGATT ATATTGGACAACTCCAGTAGGCTTGCCTCGTAATTCCGGGCGTTTCCTCTGTTCCACTTG GACGTAGAAGCAGTCGAGGTCGACATGCGCTATCACTCGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9Y253 |
Definition |
sp|Q9Y253|POLH_HUMAN DNA polymerase eta OS=Homo sapiens |
Align length |
146 |
Score (bit) |
157.0 |
E-value |
2.0e-38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921395|Adiantum capillus-veneris mRNA, clone: YMU001_000149_D02. (520 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9Y253|POLH_HUMAN DNA polymerase eta OS=Homo sapiens GN=POLH ... 157 2e-38 sp|Q9JJN0|POLH_MOUSE DNA polymerase eta OS=Mus musculus GN=Polh ... 157 4e-38 sp|Q6R3M4|POLI_MOUSE DNA polymerase iota OS=Mus musculus GN=Poli... 86 1e-16 sp|Q9UNA4|POLI_HUMAN DNA polymerase iota OS=Homo sapiens GN=POLI... 84 3e-16 sp|B0TQD1|DPO4_SHEHH DNA polymerase IV OS=Shewanella halifaxensi... 80 6e-15 sp|Q92XH8|DPO42_RHIME DNA polymerase IV 2 OS=Rhizobium meliloti ... 80 8e-15 sp|Q8PCW8|DPO4_XANCP DNA polymerase IV OS=Xanthomonas campestris... 79 1e-14 sp|Q4UQI2|DPO4_XANC8 DNA polymerase IV OS=Xanthomonas campestris... 79 1e-14 sp|Q818U9|DPO4_BACCR DNA polymerase IV OS=Bacillus cereus (strai... 79 1e-14 sp|Q8EQ56|DPO4_OCEIH DNA polymerase IV OS=Oceanobacillus iheyens... 79 2e-14 sp|Q8PGJ4|DPO4_XANAC DNA polymerase IV OS=Xanthomonas axonopodis... 78 2e-14 sp|Q98NW7|DPO43_RHILO DNA polymerase IV 3 OS=Rhizobium loti GN=d... 78 3e-14 sp|A0AK80|DPO4_LISW6 DNA polymerase IV OS=Listeria welshimeri se... 77 4e-14 sp|Q2P7M9|DPO4_XANOM DNA polymerase IV OS=Xanthomonas oryzae pv.... 77 6e-14 sp|A8H771|DPO4_SHEPA DNA polymerase IV OS=Shewanella pealeana (s... 77 6e-14 sp|Q3BP42|DPO4_XANC5 DNA polymerase IV OS=Xanthomonas campestris... 76 8e-14 sp|Q12Q05|DPO4_SHEDO DNA polymerase IV OS=Shewanella denitrifica... 76 8e-14 sp|A8FYV3|DPO4_SHESH DNA polymerase IV OS=Shewanella sediminis (... 76 1e-13 sp|Q8Y5T0|DPO4_LISMO DNA polymerase IV OS=Listeria monocytogenes... 76 1e-13 sp|Q71Y46|DPO4_LISMF DNA polymerase IV OS=Listeria monocytogenes... 76 1e-13 sp|Q92A40|DPO4_LISIN DNA polymerase IV OS=Listeria innocua GN=di... 76 1e-13 sp|Q8EHU9|DPO4_SHEON DNA polymerase IV OS=Shewanella oneidensis ... 75 1e-13 sp|Q3KH18|DPO4_PSEPF DNA polymerase IV OS=Pseudomonas fluorescen... 75 1e-13 sp|Q635E0|DPO4_BACCZ DNA polymerase IV OS=Bacillus cereus (strai... 75 1e-13 sp|Q81M86|DPO4_BACAN DNA polymerase IV OS=Bacillus anthracis GN=... 75 1e-13 sp|A3QGY9|DPO4_SHELP DNA polymerase IV OS=Shewanella loihica (st... 75 2e-13 sp|Q8UJK7|DPO42_AGRT5 DNA polymerase IV 2 OS=Agrobacterium tumef... 75 2e-13 sp|Q4ZWM4|DPO4_PSEU2 DNA polymerase IV OS=Pseudomonas syringae p... 74 4e-13 sp|Q48FB2|DPO4_PSE14 DNA polymerase IV OS=Pseudomonas syringae p... 74 4e-13 sp|Q0HY21|DPO4_SHESR DNA polymerase IV OS=Shewanella sp. (strain... 74 5e-13
>sp|Q9Y253|POLH_HUMAN DNA polymerase eta OS=Homo sapiens GN=POLH PE=1 SV=1 Length = 713
Score = 157 bits (398), Expect = 2e-38 Identities = 82/146 (56%), Positives = 106/146 (72%), Gaps = 4/146 (2%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 RV+A VD+DCF+VQVEQR+ P LR KP VVQY WKGGG+IAV YEAR FGVTR+M D Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWAD 66
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSRKGTCERASIDEVYLDITEASA 160 +AKK+CPD+ L QV + GKA+LT+YR+A EV+ ++SR ERASIDE Y+D+T A Sbjct: 67 DAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFAVIERASIDEAYVDLTSAVQ 126
Query: 159 ALLFQ---EPFSEEVLKS-HILGLSE 94 L + +P S ++L S +I GL + Sbjct: 127 ERLQKLQGQPISADLLPSTYIEGLPQ 152
>sp|Q9JJN0|POLH_MOUSE DNA polymerase eta OS=Mus musculus GN=Polh PE=1 SV=1 Length = 694
Score = 157 bits (396), Expect = 4e-38 Identities = 82/144 (56%), Positives = 104/144 (72%), Gaps = 4/144 (2%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 RV+A VD+DCF+VQVEQR+ P LR KP VVQY WKGGG+IAV YEAR FGVTRNM D Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRNMWAD 66
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSRKGTCERASIDEVYLDITEASA 160 +AKK+CPD+ L QV + GKA+LT+YR+A EV+ ++S ERASIDE Y+D+T A Sbjct: 67 DAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSYFAVIERASIDEAYIDLTSAVQ 126
Query: 159 ALLFQ---EPFSEEVLKS-HILGL 100 L + +P S ++L S +I GL Sbjct: 127 ERLQKLQGQPISADLLPSTYIEGL 150
>sp|Q6R3M4|POLI_MOUSE DNA polymerase iota OS=Mus musculus GN=Poli PE=1 SV=1 Length = 717
Score = 85.9 bits (211), Expect = 1e-16 Identities = 56/140 (40%), Positives = 74/140 (52%), Gaps = 1/140 (0%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 RVI HVDLDCFY QVE PEL+ +P GV Q L ++ YEARK GV + M Sbjct: 28 RVIVHVDLDCFYAQVEMISNPELKDRPLGVQQKYL-----VVTCNYEARKLGVRKLMNVR 82
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSR-KGTCERASIDEVYLDITEAS 163 +AK+ CP + L+ DL++YR+ +V +L ER DE ++D+TE Sbjct: 83 DAKEKCPQLVLV------NGEDLSRYREMSYKVTELLEEFSPAVERLGFDENFVDLTEMV 136
Query: 162 AALLFQEPFSEEVLKSHILG 103 L Q P SEEV + G Sbjct: 137 EKRLQQLP-SEEVPSVTVFG 155
>sp|Q9UNA4|POLI_HUMAN DNA polymerase iota OS=Homo sapiens GN=POLI PE=1 SV=1 Length = 715
Score = 84.3 bits (207), Expect = 3e-16 Identities = 50/118 (42%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 RVI HVDLDCFY QVE PEL+ KP GV Q L ++ YEARK GV + M Sbjct: 28 RVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMNVR 82
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSR-KGTCERASIDEVYLDITE 169 +AK+ CP + L+ DLT+YR+ +V +L ER DE ++D+TE Sbjct: 83 DAKEKCPQLVLV------NGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTE 134
>sp|B0TQD1|DPO4_SHEHH DNA polymerase IV OS=Shewanella halifaxensis (strain HAW-EB4) GN=dinB PE=3 SV=1 Length = 358
Score = 80.1 bits (196), Expect = 6e-15 Identities = 52/136 (38%), Positives = 71/136 (52%), Gaps = 5/136 (3%) Frame = -2
Query: 513 IAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGDEA 334 I HVD+DCFY VE R PELRGKP V + + G + YEAR+FGV M A Sbjct: 4 IIHVDMDCFYAAVEMRDFPELRGKPIAVGGRS-DRRGVISTCNYEARQFGVRSAMASGYA 62
Query: 333 KKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSR-KGTCERASIDEVYLDITEAS-- 163 K+CPD+ L+ + Y++ +++ V R E S+DE YLD+TE+S Sbjct: 63 LKLCPDLILV-------PGRMQVYKEVSNQIRAVFERYTDLIEPLSLDEAYLDVTESSHC 115
Query: 162 --AALLFQEPFSEEVL 121 +A L E E+L Sbjct: 116 KGSATLMAEAIRAEIL 131
>sp|Q92XH8|DPO42_RHIME DNA polymerase IV 2 OS=Rhizobium meliloti GN=dinB2 PE=3 SV=2 Length = 354
Score = 79.7 bits (195), Expect = 8e-15 Identities = 57/166 (34%), Positives = 82/166 (49%), Gaps = 1/166 (0%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 R I H+D+D FY VEQR PELRGKP V G + A YEARKFGV M Sbjct: 2 RKIIHIDMDAFYASVEQRDNPELRGKPVAVGYPE--ARGVVAAASYEARKFGVHSAMPSV 59
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSR-KGTCERASIDEVYLDITEAS 163 AK+ CP EL+ VP + D+ YR ++ + + E S+DE YLD+TE Sbjct: 60 TAKRKCP--ELIFVP---HRFDV--YRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENF 112
Query: 162 AALLFQEPFSEEVLKSHILGLSEVGQEWSITVKGWLSRSILDPKRP 25 L +EE+ + I + + ++ +L++ D ++P Sbjct: 113 RGLKLATEIAEEI-RGRIRAETHLTASAGVSYNKFLAKMASDQRKP 157
>sp|Q8PCW8|DPO4_XANCP DNA polymerase IV OS=Xanthomonas campestris pv. campestris GN=dinB PE=3 SV=1 Length = 359
Score = 79.3 bits (194), Expect = 1e-14 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 3/168 (1%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLI--AVGYEARKFGVTRNMR 346 R I HVD+D FY VEQR P LRGKP V W+G + A YEAR FG+ M Sbjct: 2 RKIVHVDMDAFYASVEQRDDPSLRGKPVVVA----WRGARSVVCAASYEARTFGIRSAMP 57
Query: 345 GDEAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSR-KGTCERASIDEVYLDITE 169 A+++CPD + D +Y+ +V + R E S+DE YLD+TE Sbjct: 58 AVRAERLCPDAVFV-------PPDFARYKAVSRQVREIFHRHTDLVEPLSLDEAYLDVTE 110
Query: 168 ASAALLFQEPFSEEVLKSHILGLSEVGQEWSITVKGWLSRSILDPKRP 25 A + + +++++ I +++ I +L++ D ++P Sbjct: 111 AKTGMQLATEIA-QLIRTQIREETQLTASAGIAPNKFLAKIASDWRKP 157
>sp|Q4UQI2|DPO4_XANC8 DNA polymerase IV OS=Xanthomonas campestris pv. campestris (strain 8004) GN=dinB PE=3 SV=1 Length = 359
Score = 79.3 bits (194), Expect = 1e-14 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 3/168 (1%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLI--AVGYEARKFGVTRNMR 346 R I HVD+D FY VEQR P LRGKP V W+G + A YEAR FG+ M Sbjct: 2 RKIVHVDMDAFYASVEQRDDPSLRGKPVVVA----WRGARSVVCAASYEARTFGIRSAMP 57
Query: 345 GDEAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSR-KGTCERASIDEVYLDITE 169 A+++CPD + D +Y+ +V + R E S+DE YLD+TE Sbjct: 58 AVRAERLCPDAVFV-------PPDFARYKAVSRQVREIFHRHTDLVEPLSLDEAYLDVTE 110
Query: 168 ASAALLFQEPFSEEVLKSHILGLSEVGQEWSITVKGWLSRSILDPKRP 25 A + + +++++ I +++ I +L++ D ++P Sbjct: 111 AKTGMQLATEIA-QLIRTQIREETQLTASAGIAPNKFLAKIASDWRKP 157
>sp|Q818U9|DPO4_BACCR DNA polymerase IV OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dinB PE=3 SV=1 Length = 415
Score = 79.3 bits (194), Expect = 1e-14 Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 1/121 (0%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 RVI HVD++CF+ VE P L+GKP V + G +I YEAR++G+ M Sbjct: 13 RVILHVDMNCFFASVEIAHDPSLQGKPLAVAGNEKERKGIIITCSYEAREYGIRTTMPLW 72
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSR-KGTCERASIDEVYLDITEAS 163 EAK++CP + + + + T YR+A ++ VLSR + SIDE YLDIT+ Sbjct: 73 EAKRLCPQLVVR-------RPNFTLYREASFQMFQVLSRFTEKIQPVSIDEGYLDITDCY 125
Query: 162 A 160 A Sbjct: 126 A 126
>sp|Q8EQ56|DPO4_OCEIH DNA polymerase IV OS=Oceanobacillus iheyensis GN=dinB PE=3 SV=1 Length = 419
Score = 78.6 bits (192), Expect = 2e-14 Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 2/167 (1%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 R+I H+D++CFY VE P L+GKP + + G ++ YEAR GV M Sbjct: 10 RIIFHIDMNCFYASVEMAHNPSLKGKPLAIAGNPEERKGIIVTSSYEARGKGVKTTMPIW 69
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSR-KGTCERASIDEVYLDITEAS 163 +AKK+CPD+ LM + + +YR A E+ +L+ + SIDE Y+DIT+ Sbjct: 70 QAKKLCPDLILM-------RPNFDRYRAASREIFKMLAEITPYVQPVSIDEGYMDITDTI 122
Query: 162 AALLFQEPF-SEEVLKSHILGLSEVGQEWSITVKGWLSRSILDPKRP 25 A ++P + L+ IL ++ I +L++ D K+P Sbjct: 123 YA---KDPLVTANQLQQRILSGLDIPCSIGIAPNKFLAKMASDMKKP 166
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P2M1 |
Definition |
tr|A7P2M1|A7P2M1_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
167 |
Score (bit) |
230.0 |
E-value |
3.0e-59 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921395|Adiantum capillus-veneris mRNA, clone: YMU001_000149_D02. (520 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P2M1|A7P2M1_VITVI Chromosome chr1 scaffold_5, whole genome ... 230 3e-59 tr|A9SSX2|A9SSX2_PHYPA Predicted protein OS=Physcomitrella paten... 219 8e-56 tr|Q8H2D5|Q8H2D5_ARATH Putative DNA polymerase eta OS=Arabidopsi... 215 9e-55 tr|Q8H1C5|Q8H1C5_ARATH Putative translesion synthesis polymerase... 215 9e-55 tr|A4ZYA8|A4ZYA8_ARATH Translesion synthesis DNA polymerase eta ... 215 9e-55 tr|A4ZYA7|A4ZYA7_ARATH Translesion synthesis DNA polymerase eta ... 215 9e-55 tr|Q5JLR9|Q5JLR9_ORYSJ Putative DNA polymerase (Os01g0757800 pro... 214 2e-54 tr|Q5JLR8|Q5JLR8_ORYSJ Putative DNA polymerase OS=Oryza sativa s... 214 2e-54 tr|A2WV83|A2WV83_ORYSI Putative uncharacterized protein OS=Oryza... 207 2e-52 tr|O48586|O48586_ARATH Similar to DNA-damage-inducible protein P... 206 4e-52 tr|A2ZXZ8|A2ZXZ8_ORYSJ Putative uncharacterized protein OS=Oryza... 181 2e-44 tr|A7S226|A7S226_NEMVE Predicted protein (Fragment) OS=Nematoste... 179 1e-43 tr|B6LRM6|B6LRM6_BRAFL Putative uncharacterized protein (Fragmen... 169 1e-40 tr|Q6DCL9|Q6DCL9_XENLA Polh-prov protein OS=Xenopus laevis GN=po... 164 2e-39 tr|Q58M11|Q58M11_XENLA DNA polymerase eta OS=Xenopus laevis PE=2... 164 2e-39 tr|Q3ZBE3|Q3ZBE3_BOVIN Polymerase (DNA directed), eta OS=Bos tau... 161 2e-38 tr|Q0V8A1|Q0V8A1_BOVIN Polymerase (DNA directed), eta OS=Bos tau... 161 2e-38 tr|Q1RLS3|Q1RLS3_DANRE Zgc:136881 OS=Danio rerio GN=zgc:136881 P... 160 3e-38 tr|Q0V979|Q0V979_DANRE Zgc:136881 OS=Danio rerio GN=zgc:136881 P... 160 3e-38 tr|B3KN75|B3KN75_HUMAN cDNA FLJ13831 fis, clone THYRO1000662, hi... 157 2e-37 tr|Q7PXH4|Q7PXH4_ANOGA AGAP001404-PA OS=Anopheles gambiae GN=AGA... 154 3e-36 tr|Q17CG9|Q17CG9_AEDAE DNA polymerase eta OS=Aedes aegypti GN=AA... 153 6e-36 tr|Q7T2X8|Q7T2X8_CHICK Polymerase eta OS=Gallus gallus GN=pol et... 152 7e-36 tr|Q5ZIW9|Q5ZIW9_CHICK Putative uncharacterized protein OS=Gallu... 152 7e-36 tr|B4J0Q9|B4J0Q9_DROGR GH17135 OS=Drosophila grimshawi GN=GH1713... 152 1e-35 tr|Q4SL60|Q4SL60_TETNG Chromosome 17 SCAF14563, whole genome sho... 151 2e-35 tr|B7QI10|B7QI10_IXOSC DNA polymerase eta, putative OS=Ixodes sc... 151 2e-35 tr|B4LHT0|B4LHT0_DROVI GJ11416 OS=Drosophila virilis GN=GJ11416 ... 147 2e-34 tr|B4L005|B4L005_DROMO GI11744 OS=Drosophila mojavensis GN=GI117... 147 2e-34 tr|B3NJ12|B3NJ12_DROER GG13193 OS=Drosophila erecta GN=GG13193 P... 147 2e-34
>tr|A7P2M1|A7P2M1_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030106001 PE=4 SV=1 Length = 573
Score = 230 bits (587), Expect = 3e-59 Identities = 113/167 (67%), Positives = 136/167 (81%), Gaps = 6/167 (3%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 R+IAH+D+DCFYVQVEQRK+P+LRG PT VVQYN WKGGGLIAV YEARKFGV R+MRGD Sbjct: 12 RIIAHIDMDCFYVQVEQRKQPDLRGLPTAVVQYNSWKGGGLIAVSYEARKFGVKRSMRGD 71
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSRKGTCERASIDEVYLDITEASA 160 EAK+VCP I+L+QVPVA GKADL YR+AGSEVV++L+RKG CERASIDEVYLD+T+A+ Sbjct: 72 EAKQVCPQIQLVQVPVARGKADLNVYRNAGSEVVSILARKGRCERASIDEVYLDLTDAAE 131
Query: 159 ALLFQEP------FSEEVLKSHILGLSEVGQEWSITVKGWLSRSILD 37 A+L + P EE LKSH+LGL+E G + +V+ WL RS D Sbjct: 132 AMLAEMPPESLEAIDEEALKSHVLGLNEGGNDIKESVRVWLCRSQAD 178
>tr|A9SSX2|A9SSX2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_134789 PE=4 SV=1 Length = 446
Score = 219 bits (557), Expect = 8e-56 Identities = 114/163 (69%), Positives = 129/163 (79%), Gaps = 5/163 (3%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 RVIAH+DLDCFYVQVEQRKRPELRGKP VVQ+N WKGGGLIAV YEARK GV R MRGD Sbjct: 12 RVIAHLDLDCFYVQVEQRKRPELRGKPVAVVQFNPWKGGGLIAVSYEARKCGVLRCMRGD 71
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSRKGTCERASIDEVYLDITEASA 160 +AKK+CPDIEL+QVP AHG A++ YRDAG+EVV VLSR G CERASIDEVYLDITEA+A Sbjct: 72 DAKKMCPDIELVQVPTAHGHANVNYYRDAGTEVVEVLSRGGICERASIDEVYLDITEAAA 131
Query: 159 ALLFQ-----EPFSEEVLKSHILGLSEVGQEWSITVKGWLSRS 46 A L + SEE K+HILGL E G+ ++T WL +S Sbjct: 132 ARLIKGLPSLGTLSEEARKTHILGLEEDGEN-AMTAGEWLCQS 173
>tr|Q8H2D5|Q8H2D5_ARATH Putative DNA polymerase eta OS=Arabidopsis thaliana GN=At5g44740 PE=1 SV=1 Length = 672
Score = 215 bits (548), Expect = 9e-55 Identities = 108/168 (64%), Positives = 131/168 (77%), Gaps = 7/168 (4%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 RVIAHVD+DCFYVQVEQRK+PELRG P+ VVQYN W+GGGLIAV YEARK GV R+MRGD Sbjct: 12 RVIAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEARKCGVKRSMRGD 71
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSRKGTCERASIDEVYLDITEASA 160 EAK CP I+L+QVPVA GKADL YR AGSEVV++L++ G CERASIDEVYLD+T+A+ Sbjct: 72 EAKAACPQIQLVQVPVARGKADLNLYRSAGSEVVSILAKSGKCERASIDEVYLDLTDAAE 131
Query: 159 ALLFQEP------FSEEVLKSHILGLS-EVGQEWSITVKGWLSRSILD 37 ++L P EEVLKSHILG++ E G ++ +V+ W+ R D Sbjct: 132 SMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDAD 179
>tr|Q8H1C5|Q8H1C5_ARATH Putative translesion synthesis polymerase RAD30 OS=Arabidopsis thaliana PE=2 SV=1 Length = 672
Score = 215 bits (548), Expect = 9e-55 Identities = 108/168 (64%), Positives = 131/168 (77%), Gaps = 7/168 (4%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 RVIAHVD+DCFYVQVEQRK+PELRG P+ VVQYN W+GGGLIAV YEARK GV R+MRGD Sbjct: 12 RVIAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEARKCGVKRSMRGD 71
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSRKGTCERASIDEVYLDITEASA 160 EAK CP I+L+QVPVA GKADL YR AGSEVV++L++ G CERASIDEVYLD+T+A+ Sbjct: 72 EAKAACPQIQLVQVPVARGKADLNLYRSAGSEVVSILAKSGKCERASIDEVYLDLTDAAE 131
Query: 159 ALLFQEP------FSEEVLKSHILGLS-EVGQEWSITVKGWLSRSILD 37 ++L P EEVLKSHILG++ E G ++ +V+ W+ R D Sbjct: 132 SMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDAD 179
>tr|A4ZYA8|A4ZYA8_ARATH Translesion synthesis DNA polymerase eta splice variant OS=Arabidopsis thaliana GN=POLH PE=2 SV=1 Length = 442
Score = 215 bits (548), Expect = 9e-55 Identities = 108/168 (64%), Positives = 131/168 (77%), Gaps = 7/168 (4%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 RVIAHVD+DCFYVQVEQRK+PELRG P+ VVQYN W+GGGLIAV YEARK GV R+MRGD Sbjct: 12 RVIAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEARKCGVKRSMRGD 71
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSRKGTCERASIDEVYLDITEASA 160 EAK CP I+L+QVPVA GKADL YR AGSEVV++L++ G CERASIDEVYLD+T+A+ Sbjct: 72 EAKAACPQIQLVQVPVARGKADLNLYRSAGSEVVSILAKSGKCERASIDEVYLDLTDAAE 131
Query: 159 ALLFQEP------FSEEVLKSHILGLS-EVGQEWSITVKGWLSRSILD 37 ++L P EEVLKSHILG++ E G ++ +V+ W+ R D Sbjct: 132 SMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDAD 179
>tr|A4ZYA7|A4ZYA7_ARATH Translesion synthesis DNA polymerase eta splice variant OS=Arabidopsis thaliana GN=POLH PE=2 SV=1 Length = 350
Score = 215 bits (548), Expect = 9e-55 Identities = 108/168 (64%), Positives = 131/168 (77%), Gaps = 7/168 (4%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 RVIAHVD+DCFYVQVEQRK+PELRG P+ VVQYN W+GGGLIAV YEARK GV R+MRGD Sbjct: 12 RVIAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEARKCGVKRSMRGD 71
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSRKGTCERASIDEVYLDITEASA 160 EAK CP I+L+QVPVA GKADL YR AGSEVV++L++ G CERASIDEVYLD+T+A+ Sbjct: 72 EAKAACPQIQLVQVPVARGKADLNLYRSAGSEVVSILAKSGKCERASIDEVYLDLTDAAE 131
Query: 159 ALLFQEP------FSEEVLKSHILGLS-EVGQEWSITVKGWLSRSILD 37 ++L P EEVLKSHILG++ E G ++ +V+ W+ R D Sbjct: 132 SMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDAD 179
>tr|Q5JLR9|Q5JLR9_ORYSJ Putative DNA polymerase (Os01g0757800 protein) OS=Oryza sativa subsp. japonica GN=B1131G08.4-2 PE=4 SV=1 Length = 642
Score = 214 bits (546), Expect = 2e-54 Identities = 110/167 (65%), Positives = 125/167 (74%), Gaps = 6/167 (3%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 RVIAHVD+DCFYVQVEQR+ PELRG+PT VVQYN WKGGGLIAV YEARKFGV R+MRGD Sbjct: 12 RVIAHVDMDCFYVQVEQRRNPELRGQPTAVVQYNDWKGGGLIAVSYEARKFGVKRSMRGD 71
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSRKGTCERASIDEVYLDITEASA 160 EAK VCP I L+QVPVA KADL YR AGSEVVT+LS KG CERASIDEVYLD+T+A+ Sbjct: 72 EAKMVCPSINLVQVPVARDKADLNVYRSAGSEVVTILSTKGKCERASIDEVYLDLTDAAK 131
Query: 159 ALLFQEP------FSEEVLKSHILGLSEVGQEWSITVKGWLSRSILD 37 +L + P EE KS+ILGL +V+ WL R+ D Sbjct: 132 EMLLESPPELLELIFEEATKSNILGLPSDVSNREDSVRAWLCRADAD 178
>tr|Q5JLR8|Q5JLR8_ORYSJ Putative DNA polymerase OS=Oryza sativa subsp. japonica GN=B1131G08.4-1 PE=4 SV=1 Length = 634
Score = 214 bits (546), Expect = 2e-54 Identities = 110/167 (65%), Positives = 125/167 (74%), Gaps = 6/167 (3%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 RVIAHVD+DCFYVQVEQR+ PELRG+PT VVQYN WKGGGLIAV YEARKFGV R+MRGD Sbjct: 12 RVIAHVDMDCFYVQVEQRRNPELRGQPTAVVQYNDWKGGGLIAVSYEARKFGVKRSMRGD 71
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSRKGTCERASIDEVYLDITEASA 160 EAK VCP I L+QVPVA KADL YR AGSEVVT+LS KG CERASIDEVYLD+T+A+ Sbjct: 72 EAKMVCPSINLVQVPVARDKADLNVYRSAGSEVVTILSTKGKCERASIDEVYLDLTDAAK 131
Query: 159 ALLFQEP------FSEEVLKSHILGLSEVGQEWSITVKGWLSRSILD 37 +L + P EE KS+ILGL +V+ WL R+ D Sbjct: 132 EMLLESPPELLELIFEEATKSNILGLPSDVSNREDSVRAWLCRADAD 178
>tr|A2WV83|A2WV83_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03798 PE=4 SV=1 Length = 498
Score = 207 bits (528), Expect = 2e-52 Identities = 105/149 (70%), Positives = 117/149 (78%), Gaps = 6/149 (4%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 RVIAHVD+DCFYVQVEQR+ PELRG+PT VVQYN WKGGGLIAV YEARKFGV R+MRGD Sbjct: 12 RVIAHVDMDCFYVQVEQRRNPELRGQPTAVVQYNDWKGGGLIAVSYEARKFGVKRSMRGD 71
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSEVVTVLSRKGTCERASIDEVYLDITEASA 160 EAK VCP I L+QVPVA KADL YR AGSEVV +LS KG CERASIDEVYLD+T+A+ Sbjct: 72 EAKMVCPSINLVQVPVARDKADLNVYRSAGSEVVAILSTKGKCERASIDEVYLDLTDAAK 131
Query: 159 ALLFQEP------FSEEVLKSHILGLSEV 91 +L + P EE KS+ILGL V Sbjct: 132 EMLLESPPELLELIFEEATKSNILGLPSV 160
>tr|O48586|O48586_ARATH Similar to DNA-damage-inducible protein P OS=Arabidopsis thaliana GN=T19K24.15 PE=4 SV=1 Length = 689
Score = 206 bits (525), Expect = 4e-52 Identities = 108/180 (60%), Positives = 131/180 (72%), Gaps = 19/180 (10%) Frame = -2
Query: 519 RVIAHVDLDCFYVQVEQRKRPELRGKPTGVVQYNLWKGGGLIAVGYEARKFGVTRNMRGD 340 RVIAHVD+DCFYVQVEQRK+PELRG P+ VVQYN W+GGGLIAV YEARK GV R+MRGD Sbjct: 12 RVIAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEARKCGVKRSMRGD 71
Query: 339 EAKKVCPDIELMQVPVAHGKADLTQYRDAGSE------------VVTVLSRKGTCERASI 196 EAK CP I+L+QVPVA GKADL YR AGSE VV++L++ G CERASI Sbjct: 72 EAKAACPQIQLVQVPVARGKADLNLYRSAGSEVDGSGSYYYTVCVVSILAKSGKCERASI 131
Query: 195 DEVYLDITEASAALLFQEP------FSEEVLKSHILGLS-EVGQEWSITVKGWLSRSILD 37 DEVYLD+T+A+ ++L P EEVLKSHILG++ E G ++ +V+ W+ R D Sbjct: 132 DEVYLDLTDAAESMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDAD 191
|