BP921251 |
Clone id |
YMU001_000147_E02 |
Library |
YMU01 |
Length |
569 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000147_E02. |
Accession |
BP921251 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1419Contig1 |
Sequence |
CAAGGAGGTGCGGGCAGTCACTAATCTAGGTCTTAAGGAAGCCAAGGAGTTTGTTGAAAA AGCTCCTGGCGTTGTTAAGTCTGGATTGACGAAAGAGGAGGCTGCCCAACTTATGGAGAA GCTTAAAGCTGTGGGTGCGACTGTGGTGATGGAGTAGTTGCAGCTTTTCACATGAATCTC ATGCTTCTCTTGTTGTAGCTCTGGCTTTTCAGTATGTCTGTTTTCAGCAAGGACTCAACA GGGGCATGCGACGTGTGATGTGTGTTATGTGGAAAACAGGAAGAGTATACAGTTTGTGTC CGGAGGCCCCATTTGAGGCTTGGGGGCTCTGGGTTTGGATAATTGACTCGGGCCATAGGC TATGGTGCAGCGGGAACAAATGGTTCTGGATTCATGACTCATTGGAAGTCTGATCATTCA TACAGCAGGTGCTCTTTTTCATTTAGCATGCTTTGCATATGAATGCTTGTGTGTAGACGT CGTTTTAACAATGGGCTAAATCTTGAGTGATTCTTTACCTTACTCTGGTTCTTCTCTATA TTTAGTTGAAAGCTTTCTGATCCAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P41189 |
Definition |
sp|P41189|RL7_LIBAF 50S ribosomal protein L7/L12 OS=Liberibacter africanus |
Align length |
50 |
Score (bit) |
66.6 |
E-value |
8.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5X2V5 |
Definition |
tr|A5X2V5|A5X2V5_PTEVI Ribosomal protein (Fragment) OS=Pteris vittata |
Align length |
51 |
Score (bit) |
82.4 |
E-value |
2.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921251|Adiantum capillus-veneris mRNA, clone: YMU001_000147_E02. (569 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5X2V5|A5X2V5_PTEVI Ribosomal protein (Fragment) OS=Pteris vi... 82 2e-14 tr|A9TKW0|A9TKW0_PHYPA Predicted protein (Fragment) OS=Physcomit... 75 3e-12 tr|Q9SZF8|Q9SZF8_ARATH Ribosomal-like protein (AT4g37660/F19F18_... 75 3e-12 tr|A9TYT7|A9TYT7_PHYPA Predicted protein OS=Physcomitrella paten... 74 4e-12 tr|A9S410|A9S410_PHYPA Predicted protein (Fragment) OS=Physcomit... 74 6e-12 tr|Q3HVP5|Q3HVP5_SOLTU Putative uncharacterized protein OS=Solan... 72 2e-11 tr|A7P2P4|A7P2P4_VITVI Chromosome chr1 scaffold_5, whole genome ... 72 2e-11 tr|Q8LI41|Q8LI41_ORYSJ Os07g0626100 protein OS=Oryza sativa subs... 72 3e-11 tr|A2YNW2|A2YNW2_ORYSI Putative uncharacterized protein OS=Oryza... 72 3e-11 tr|Q6I629|Q6I629_ORYSJ Os05g0554100 protein OS=Oryza sativa subs... 71 4e-11 tr|Q6AVT7|Q6AVT7_ORYSJ Os03g0734400 protein OS=Oryza sativa subs... 71 4e-11 tr|B4FHV0|B4FHV0_MAIZE Putative uncharacterized protein OS=Zea m... 71 4e-11 tr|A3AMF2|A3AMF2_ORYSJ Putative uncharacterized protein OS=Oryza... 71 4e-11 tr|A2Y795|A2Y795_ORYSI Putative uncharacterized protein OS=Oryza... 71 4e-11 tr|A2XLR1|A2XLR1_ORYSI Putative uncharacterized protein OS=Oryza... 71 4e-11 tr|B4G1F2|B4G1F2_MAIZE 39S ribosomal protein L12 OS=Zea mays PE=... 70 6e-11 tr|O23238|O23238_ARATH Ribosomal protein (At4g36420/C7A10_940) O... 70 8e-11 tr|B6SHR0|B6SHR0_MAIZE 50S ribosomal protein L12-2 OS=Zea mays P... 70 8e-11 tr|B6TP18|B6TP18_MAIZE 50S ribosomal protein L12-2 OS=Zea mays P... 69 1e-10 tr|B6SHT7|B6SHT7_MAIZE 50S ribosomal protein L12-2 OS=Zea mays P... 69 1e-10 tr|B6TIJ5|B6TIJ5_MAIZE 50S ribosomal protein L12-2 OS=Zea mays P... 69 2e-10 tr|B6T4E0|B6T4E0_MAIZE 50S ribosomal protein L12-2 OS=Zea mays P... 69 2e-10 tr|A7QZB4|A7QZB4_VITVI Chromosome chr7 scaffold_270, whole genom... 69 2e-10 tr|A7PCZ5|A7PCZ5_VITVI Chromosome chr17 scaffold_12, whole genom... 69 2e-10 tr|A5C502|A5C502_VITVI Putative uncharacterized protein OS=Vitis... 69 2e-10 tr|Q9M7T1|Q9M7T1_ARATH Putative uncharacterized protein F24F17.2... 68 4e-10 tr|O04527|O04527_ARATH F20P5.9 protein (Putative uncharacterized... 67 5e-10 tr|Q6H730|Q6H730_ORYSJ Os02g0198900 protein OS=Oryza sativa subs... 65 2e-09 tr|A7QE59|A7QE59_VITVI Chromosome chr4 scaffold_83, whole genome... 65 2e-09 tr|A2X232|A2X232_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09
>tr|A5X2V5|A5X2V5_PTEVI Ribosomal protein (Fragment) OS=Pteris vittata PE=2 SV=1 Length = 216
Score = 82.4 bits (202), Expect = 2e-14 Identities = 41/51 (80%), Positives = 47/51 (92%) Frame = +2
Query: 2 KEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATVVME 154 KEVRA ++LGLKEAKEFVEK P V+KSGLTKEEA+QL++KLKAVGAT VME Sbjct: 166 KEVRAASDLGLKEAKEFVEKVPAVLKSGLTKEEASQLIDKLKAVGATAVME 216
>tr|A9TKW0|A9TKW0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_48350 PE=4 SV=1 Length = 150
Score = 75.1 bits (183), Expect = 3e-12 Identities = 38/51 (74%), Positives = 44/51 (86%) Frame = +2
Query: 2 KEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATVVME 154 KEVR TNLGLKEAKE VEKAP V+KSG+ KEEA Q++EKLK+VGAT +ME Sbjct: 100 KEVRTFTNLGLKEAKELVEKAPIVLKSGVGKEEAEQIVEKLKSVGATALME 150
>tr|Q9SZF8|Q9SZF8_ARATH Ribosomal-like protein (AT4g37660/F19F18_150) OS=Arabidopsis thaliana GN=F19F18.150 PE=2 SV=1 Length = 167
Score = 74.7 bits (182), Expect = 3e-12 Identities = 37/51 (72%), Positives = 44/51 (86%) Frame = +2
Query: 2 KEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATVVME 154 KE+RA T+LGLKEAK VEKAP +VK+GLTKEEA ++MEKLKAVGA V +E Sbjct: 117 KEIRAFTDLGLKEAKALVEKAPVIVKNGLTKEEAEKIMEKLKAVGAIVALE 167
>tr|A9TYT7|A9TYT7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226758 PE=4 SV=1 Length = 195
Score = 74.3 bits (181), Expect = 4e-12 Identities = 38/51 (74%), Positives = 45/51 (88%) Frame = +2
Query: 2 KEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATVVME 154 KEVR T LGLKEAKE VEKAP V+K+G++KEEA Q++EKLK+VGATVVME Sbjct: 145 KEVRTFTALGLKEAKELVEKAPIVLKAGVSKEEADQIIEKLKSVGATVVME 195
>tr|A9S410|A9S410_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_18929 PE=4 SV=1 Length = 139
Score = 73.9 bits (180), Expect = 6e-12 Identities = 38/51 (74%), Positives = 43/51 (84%) Frame = +2
Query: 2 KEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATVVME 154 KEVR T LGLKEAKE VEKAP V+KSG++KEEA Q++EKLK VGATV ME Sbjct: 89 KEVRTFTALGLKEAKELVEKAPIVLKSGVSKEEAEQIIEKLKTVGATVTME 139
>tr|Q3HVP5|Q3HVP5_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 194
Score = 72.4 bits (176), Expect = 2e-11 Identities = 34/51 (66%), Positives = 43/51 (84%) Frame = +2
Query: 2 KEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATVVME 154 KEVR+ T+LGLKEAKE VEKAP ++K G+TKEEA +++EK+KAVG VME Sbjct: 144 KEVRSFTSLGLKEAKELVEKAPAILKQGVTKEEANEIIEKIKAVGGVAVME 194
>tr|A7P2P4|A7P2P4_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence (Chromosome undetermined scaffold_1178, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00008009001 PE=4 SV=1 Length = 206
Score = 72.4 bits (176), Expect = 2e-11 Identities = 35/51 (68%), Positives = 45/51 (88%) Frame = +2
Query: 2 KEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATVVME 154 KEVR+ T+LGLKEAK+ VEKAP V+K+G++KEE QL+EKLKA+GA VV+E Sbjct: 156 KEVRSFTDLGLKEAKDLVEKAPSVLKAGVSKEEGEQLVEKLKALGAKVVLE 206
>tr|Q8LI41|Q8LI41_ORYSJ Os07g0626100 protein OS=Oryza sativa subsp. japonica GN=OJ1339_F05.119 PE=2 SV=1 Length = 167
Score = 71.6 bits (174), Expect = 3e-11 Identities = 38/51 (74%), Positives = 41/51 (80%) Frame = +2
Query: 2 KEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATVVME 154 KEVRAVT+LGLKEAKE VEKAP VV+SGL KEEA L KLKA GA V +E Sbjct: 117 KEVRAVTDLGLKEAKELVEKAPVVVRSGLPKEEAEALAAKLKAAGAAVALE 167
>tr|A2YNW2|A2YNW2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26940 PE=4 SV=1 Length = 167
Score = 71.6 bits (174), Expect = 3e-11 Identities = 38/51 (74%), Positives = 41/51 (80%) Frame = +2
Query: 2 KEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATVVME 154 KEVRAVT+LGLKEAKE VEKAP VV+SGL KEEA L KLKA GA V +E Sbjct: 117 KEVRAVTDLGLKEAKELVEKAPVVVRSGLPKEEAEALAAKLKAAGAAVALE 167
>tr|Q6I629|Q6I629_ORYSJ Os05g0554100 protein OS=Oryza sativa subsp. japonica GN=OJ1263_E10.8 PE=2 SV=1 Length = 198
Score = 71.2 bits (173), Expect = 4e-11 Identities = 33/51 (64%), Positives = 44/51 (86%) Frame = +2
Query: 2 KEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATVVME 154 KE+R+ T+LGLKEAKE VEKAP V+K G++KEEA +++K+KAVGA VVM+ Sbjct: 148 KEIRSFTDLGLKEAKELVEKAPAVIKGGVSKEEARTIIDKMKAVGAKVVMD 198
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