BP921219
Clone id YMU001_000147_B05
Library
Length 600
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000147_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GCAAAACAAAGAACAAAAATCATCACCATTCTTTTGCCAAAGACTTAATGAAGCTCTAGA
ACCACATTGAATTATACAAGCTTACAACATGATGTATGTTCTTGAACTCCATACACTCCA
TTTGATTAGAACGTTAAACTAAGATGATTTCCTCATGGGCCTTGATTCATCTAAATACAG
TGTGCTGCTATAACATACATACTCGCTCCACTCCACTTTTAGATAGAATCTTTGAGGATT
CTATTTTTGATAAATCAATTTCTCTTGCAAAAGGGAGGCAACACGTCACTGGAGTACTCA
CAACATCTATGACTCCTGTTGCTCCCAGGCATCTCCCCTCACCTACTGCCCTATTGCTAT
GATGATGACGCAGAGTGTTTCCTTTCCATGGTCACCTATAGCACTACACGGTAGATTCTC
TCTTTAGGACCCTCTTCACAATAGTTTCCTACTGCCTTGTTGCAAGTCCTAGCCCTGCCC
TACGTGTTCAACTTCTTCTTTGTGTCCTAGCCGAGGAGTTTTTCCACCCACACTTCTCGA
ATCCTACCATTCGCGGCCGCAAATTCTTCCAGTTGAGTACCTGCAGGTAATATCTCAAGG
■■Homology search results ■■ -
sp_hit_id P38572
Definition sp|P38572|UPK1A_BOVIN Uroplakin-1a OS=Bos taurus
Align length 46
Score (bit) 31.6
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921219|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_B05.
(548 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P38572|UPK1A_BOVIN Uroplakin-1a OS=Bos taurus GN=UPK1A PE=1 SV=1 32 2.6
sp|Q9D132|UPK1A_MOUSE Uroplakin-1a OS=Mus musculus GN=Upk1a PE=1... 31 3.4
sp|Q9H7F4|T185B_HUMAN Transmembrane protein 185B OS=Homo sapiens... 31 4.5
sp|Q08DE2|T185A_BOVIN Transmembrane protein 185B OS=Bos taurus G... 30 5.9
sp|O00322|UPK1A_HUMAN Uroplakin-1a OS=Homo sapiens GN=UPK1A PE=2... 30 7.7
sp|Q8R3R5|T185B_MOUSE Transmembrane protein 185B OS=Mus musculus... 30 7.7

>sp|P38572|UPK1A_BOVIN Uroplakin-1a OS=Bos taurus GN=UPK1A PE=1 SV=1
Length = 258

Score = 31.6 bits (70), Expect = 2.6
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +2

Query: 272 REATRHWSTHNIYDSCCSQASPLTYCPIAMMM---TQSVSFPWSPI 400
RE TR W I CC + P+ + T V FPW P+
Sbjct: 144 RELTRLWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPL 189


>sp|Q9D132|UPK1A_MOUSE Uroplakin-1a OS=Mus musculus GN=Upk1a PE=1
SV=1
Length = 257

Score = 31.2 bits (69), Expect = 3.4
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +2

Query: 272 REATRHWSTHNIYDSCCSQASPL---TYCPIAMMMTQSVSFPWSPI 400
+E TR W I CC + P+ Y T V FPW P+
Sbjct: 143 QELTRLWDRIMIEQECCGTSGPMDWVNYTSAFRAATPEVVFPWPPL 188


>sp|Q9H7F4|T185B_HUMAN Transmembrane protein 185B OS=Homo sapiens
GN=TMEM185B PE=2 SV=2
Length = 350

Score = 30.8 bits (68), Expect = 4.5
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = -3

Query: 240 NPQRFYLKVEWSEYVCYSSTLYLDESRPMRKSS*FNVLIKWSVWSSRTYIML*ACIIQCG 61
NP+ + S+++ Y+ L P+R +I+WS W+ I L ++ G
Sbjct: 2 NPRGLFQDFNPSKFLIYTCLLLFSVLLPLRLDG----IIQWSYWAVFAPIWLWKLLVVAG 57

Query: 60 SRASLSLWQKN 28
+ +W +N
Sbjct: 58 ASVGAGVWARN 68


>sp|Q08DE2|T185A_BOVIN Transmembrane protein 185B OS=Bos taurus
GN=TMEM185B PE=2 SV=1
Length = 350

Score = 30.4 bits (67), Expect = 5.9
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = -3

Query: 240 NPQRFYLKVEWSEYVCYSSTLYLDESRPMRKSS*FNVLIKWSVWSSRTYIML*ACIIQCG 61
NP+ + S+++ Y+ L P+R +I+WS W+ I L ++ G
Sbjct: 2 NPRGLFQDFNPSKFLIYACLLLFSVLLPLRLDG----VIQWSYWAVFAPIWLWKLLVLAG 57

Query: 60 SRASLSLWQKN 28
+ +W +N
Sbjct: 58 ASVGAGVWARN 68


>sp|O00322|UPK1A_HUMAN Uroplakin-1a OS=Homo sapiens GN=UPK1A PE=2
SV=1
Length = 258

Score = 30.0 bits (66), Expect = 7.7
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +2

Query: 272 REATRHWSTHNIYDSCCSQASPLTYCPIAMMM---TQSVSFPWSPI 400
+E TR W I CC + P+ + T V FPW P+
Sbjct: 144 QELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPL 189


>sp|Q8R3R5|T185B_MOUSE Transmembrane protein 185B OS=Mus musculus
GN=Tmem185b PE=2 SV=1
Length = 350

Score = 30.0 bits (66), Expect = 7.7
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = -3

Query: 240 NPQRFYLKVEWSEYVCYSSTLYLDESRPMRKSS*FNVLIKWSVWSSRTYIML*ACIIQCG 61
NP+ + S+++ Y+ L P+R +I+WS W+ I L ++ G
Sbjct: 2 NPRGLFQDFNPSKFLIYACLLLFSVLLPLRLDG----IIQWSYWAVFAPIWLWKLLVIVG 57

Query: 60 SRASLSLWQKN 28
+ +W +N
Sbjct: 58 ASVGAGVWARN 68


tr_hit_id Q98UH9
Definition tr|Q98UH9|Q98UH9_ORYLA Guanylate cyclase OS=Oryzias latipes
Align length 47
Score (bit) 33.5
E-value 7.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921219|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_B05.
(548 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q98UH9|Q98UH9_ORYLA Guanylate cyclase OS=Oryzias latipes GN=O... 33 7.5
tr|Q7ZZR6|Q7ZZR6_ORYLA Guanylate cyclase OS=Oryzias latipes GN=O... 33 7.5

>tr|Q98UH9|Q98UH9_ORYLA Guanylate cyclase OS=Oryzias latipes
GN=OlGC8 PE=3 SV=2
Length = 859

Score = 33.5 bits (75), Expect = 7.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2

Query: 257 NFSCKREATRHWSTHNIYDSCCSQASPLTYCPIAMMMTQSVSFPWSP 397
+F + E +W N ++CC + + CP+ M T+S+ PW P
Sbjct: 102 SFCERHECPANWKDAN-GENCCIHHANIHSCPLGYMTTESICGPWIP 147


>tr|Q7ZZR6|Q7ZZR6_ORYLA Guanylate cyclase OS=Oryzias latipes
GN=OlGC8 PE=2 SV=1
Length = 859

Score = 33.5 bits (75), Expect = 7.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2

Query: 257 NFSCKREATRHWSTHNIYDSCCSQASPLTYCPIAMMMTQSVSFPWSP 397
+F + E +W N ++CC + + CP+ M T+S+ PW P
Sbjct: 102 SFCERHECPANWKDAN-GENCCIHHANIHSCPLGYMTTESICGPWIP 147