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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921196
Clone id YMU001_000146_G11
Library
Length 563
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000146_G11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAACTTACCAAAATGCGCTTTAAGCCGGTCAGTAAGATAAGTCACCCTATTACCCTCAAA
AACCAGTGCCCAAAGCTCGTTCCATAAGGGGCTACAATTGAAGCTATTCTGGGTAATACT
GGATATGCTAGAGTTCCTAAAACAAACCAGTTGAAGCTTAGAAGTGCGACAACGTCAAAT
CCAGGTCCATTGCATATGGACAACAGAAACTGTGCCACCGTCTTCAAAGACATACACACC
ACCATAAACACAGCCCCTATGAGAGGGATGCACGGGTCTTGCGCTTCCCATGCAACTGCT
CCGACGAGTAAAGTCAGGAAAACGCTAAATAGGCTTGAGACTATTGCAGCTTTCCAGGCC
TCATATTTCGCTATATGACTCGCTATGCACTTATTGGTGCTGCCAGGAGCACCATCATAC
TTGTGATCAAGCTGTAAGGGTGTCTTTCCCGTAACACGTATTAAGTCTGGTGTCCTTGGA
TACCTGGTATGCATGAAGAATTCGTCCTTGTTGTGGTTTCTCTCCATGTTGCACTCTTTC
TTGGGAGACTCCATAACAAATCT
■■Homology search results ■■ -
sp_hit_id P29123
Definition sp|P29123|US10_EHV1K Gene 66 protein OS=Equine herpesvirus 1 (strain Kentucky A)
Align length 56
Score (bit) 32.0
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921196|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_G11.
         (563 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29123|US10_EHV1K Gene 66 protein OS=Equine herpesvirus 1 (st...    32   2.2  
sp|P36042|YKU2_YEAST Putative uncharacterized protein YKL202W OS...    31   4.8  
sp|O05979|Y789_RICPR Uncharacterized protein RP789 OS=Rickettsia...    31   4.8  
sp|Q8DVM4|MRAY_STRMU Phospho-N-acetylmuramoyl-pentapeptide-trans...    30   6.3  

>sp|P29123|US10_EHV1K Gene 66 protein OS=Equine herpesvirus 1
           (strain Kentucky A) GN=IR5 PE=3 SV=1
          Length = 236

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
 Frame = +2

Query: 281 ALPMQLLRRVKSGKR*IGLRLLQLSRPHISLYDSL------CTYWCCQEHHHTCDQ 430
           A PM +       +R +GL L+ L    +  +  L      C YWCC  H   C +
Sbjct: 97  ASPMPVFHSADPLRRAVGLYLVDLGAAPVETHAELSGRMLFCAYWCCLGHAFACSR 152


>sp|P36042|YKU2_YEAST Putative uncharacterized protein YKL202W
           OS=Saccharomyces cerevisiae GN=YKL202W PE=5 SV=1
          Length = 193

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 15/45 (33%), Positives = 28/45 (62%)
 Frame = -1

Query: 185 PGFDVVALLSFNWFVLGTLAYPVLPRIASIVAPYGTSFGHWFLRV 51
           P F  + L SF++ +L + ++P+LP  +S + P  +S   +FL+V
Sbjct: 139 PSFSSLPLPSFSFLLLPSSSFPLLPSSSSPLPPSSSSPSAFFLQV 183


>sp|O05979|Y789_RICPR Uncharacterized protein RP789 OS=Rickettsia
           prowazekii GN=RP789 PE=4 SV=2
          Length = 553

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
 Frame = -3

Query: 204 VVHMQWTWI*RCRTSKLQLVCFRNSSISSITQNSFNCSPLWNELWA----LVFEGNRVTY 37
           + H   +W+ +    K+  VC RN S + I   S+N  P WN +      +++  +  T 
Sbjct: 144 ICHGVISWVPKIVRDKIFKVCNRNLSTNGIAYISYNTLPGWNMVRTIRDMMLYHSSSFTN 203

Query: 36  LTDRL 22
           + DR+
Sbjct: 204 IRDRI 208


>sp|Q8DVM4|MRAY_STRMU
           Phospho-N-acetylmuramoyl-pentapeptide-transferase
           OS=Streptococcus mutans GN=mraY PE=3 SV=1
          Length = 339

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -1

Query: 257 GAVFMVVCMSLKTVAQFLLSICNGPGFDVVALLSFNWFVLGTLAY 123
           G VF++V   +  +  F+L I  GP F     + F   + GT+ +
Sbjct: 55  GTVFLLVAALVTFICAFVLHITGGPAFGATLAILFIVLIYGTIGF 99
tr_hit_id A7QKN7
Definition tr|A7QKN7|A7QKN7_VITVI Chromosome chr2 scaffold_113, whole genome shotgun sequence OS=Vitis vinifera
Align length 80
Score (bit) 103.0
E-value 6.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921196|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_G11.
         (563 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QKN7|A7QKN7_VITVI Chromosome chr2 scaffold_113, whole genom...   103   6e-21
tr|Q9FH79|Q9FH79_ARATH Arabidopsis thaliana genomic DNA, chromos...    86   1e-15
tr|Q94JR2|Q94JR2_ARATH AT5g45310/K9E15_9 OS=Arabidopsis thaliana...    86   1e-15
tr|A9U022|A9U022_PHYPA Predicted protein OS=Physcomitrella paten...    75   2e-12
tr|A9TAM5|A9TAM5_PHYPA Predicted protein OS=Physcomitrella paten...    70   8e-11
tr|A2WZD0|A2WZD0_ORYSI Putative uncharacterized protein OS=Oryza...    59   2e-07
tr|B6SHV5|B6SHV5_MAIZE Putative uncharacterized protein OS=Zea m...    59   2e-07
tr|A3A1S2|A3A1S2_ORYSJ Putative uncharacterized protein OS=Oryza...    57   7e-07
tr|Q6Z3B3|Q6Z3B3_ORYSJ Putative uncharacterized protein P0038F09...    53   1e-05
tr|Q7XK14|Q7XK14_ORYSJ OSJNBa0044K18.30 protein OS=Oryza sativa ...    44   0.005
tr|Q5JMS7|Q5JMS7_ORYSJ Putative uncharacterized protein P0483G10...    37   0.74 
tr|Q00YH8|Q00YH8_OSTTA LPA (ISS) OS=Ostreococcus tauri GN=Ot11g0...    35   2.2  
tr|B8JKM0|B8JKM0_DANRE Leucine rich repeat transmembrane neurona...    33   8.2  
tr|A8BBG3|A8BBG3_DANRE cDNA, clone cssl:d0378 (Fragment) OS=Dani...    33   8.2  
tr|Q8GWF5|Q8GWF5_ARATH Putative uncharacterized protein At1g6000...    33   8.2  
tr|Q8WF45|Q8WF45_9BIVA NADH dehydrogenase subunit 2 OS=Venerupis...    33   8.2  

>tr|A7QKN7|A7QKN7_VITVI Chromosome chr2 scaffold_113, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00001199001
           PE=4 SV=1
          Length = 362

 Score =  103 bits (257), Expect = 6e-21
 Identities = 47/80 (58%), Positives = 60/80 (75%)
 Frame = -1

Query: 302 GAVAWEAQDPCIPLIGAVFMVVCMSLKTVAQFLLSICNGPGFDVVALLSFNWFVLGTLAY 123
           G + WEA+DPC+PL+ A++ VV MSLK+V QF  +I N P  D VALLSFNWF+LGTL Y
Sbjct: 259 GMIIWEAEDPCMPLVVALYTVVGMSLKSVVQFFSTIKNKPASDAVALLSFNWFLLGTLTY 318

Query: 122 PVLPRIASIVAPYGTSFGHW 63
           P LPR+A ++AP   SF H+
Sbjct: 319 PTLPRVARMLAPLALSFYHY 338


>tr|Q9FH79|Q9FH79_ARATH Arabidopsis thaliana genomic DNA, chromosome
           5, TAC clone:K9E15 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 229

 Score = 85.9 bits (211), Expect = 1e-15
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -1

Query: 302 GAVAWEA--QDPCIPLIGAVFMVVCMSLKTVAQFLLSICNGPGFDVVALLSFNWFVLGTL 129
           G V +EA  Q+ C PLIGA+F VV +SLK+V QF  ++ N P  D VAL+S NWF++GTL
Sbjct: 127 GIVMYEAKEQELCTPLIGALFTVVGISLKSVVQFFSTVKNKPALDAVALMSLNWFIVGTL 186

Query: 128 AYPVLPRIASIVAP 87
            YP LPR+A IV P
Sbjct: 187 TYPTLPRVARIVVP 200


>tr|Q94JR2|Q94JR2_ARATH AT5g45310/K9E15_9 OS=Arabidopsis thaliana
           GN=At5g45310 PE=2 SV=1
          Length = 352

 Score = 85.9 bits (211), Expect = 1e-15
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -1

Query: 302 GAVAWEA--QDPCIPLIGAVFMVVCMSLKTVAQFLLSICNGPGFDVVALLSFNWFVLGTL 129
           G V +EA  Q+ C PLIGA+F VV +SLK+V QF  ++ N P  D VAL+S NWF++GTL
Sbjct: 250 GIVMYEAKEQELCTPLIGALFTVVGISLKSVVQFFSTVKNKPALDAVALMSLNWFIVGTL 309

Query: 128 AYPVLPRIASIVAP 87
            YP LPR+A IV P
Sbjct: 310 TYPTLPRVARIVVP 323


>tr|A9U022|A9U022_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_172944 PE=4 SV=1
          Length = 342

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 38/84 (45%), Positives = 53/84 (63%)
 Frame = -1

Query: 296 VAWEAQDPCIPLIGAVFMVVCMSLKTVAQFLLSICNGPGFDVVALLSFNWFVLGTLAYPV 117
           +AWE++ PC PL+ A+F VV MS  +V +F   +    GF  VALLS NWFVLGTLA+P 
Sbjct: 246 IAWESKSPCKPLVIALFSVVGMSHISVVRFFTKLQTQRGFLAVALLSLNWFVLGTLAHPA 305

Query: 116 LPRIASIVAPYGTSFGHWFLRVIG 45
           LP +  + +    + G  FL+ +G
Sbjct: 306 LPHVGPMGSGVLLAVGGRFLKFLG 329


>tr|A9TAM5|A9TAM5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_168924 PE=4 SV=1
          Length = 302

 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 35/62 (56%), Positives = 45/62 (72%)
 Frame = -1

Query: 296 VAWEAQDPCIPLIGAVFMVVCMSLKTVAQFLLSICNGPGFDVVALLSFNWFVLGTLAYPV 117
           VA EA+DPC PL+ A+F VV MSL +V +F   + +  GF  VALLS NWFV+GTLA+P 
Sbjct: 213 VAGEAKDPCQPLVIALFSVVGMSLISVVRFFTKLQSQRGFLAVALLSLNWFVVGTLAHPA 272

Query: 116 LP 111
           +P
Sbjct: 273 MP 274


>tr|A2WZD0|A2WZD0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05308 PE=4 SV=1
          Length = 330

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
 Frame = -1

Query: 302 GAVAWEAQDPCIPLIGAVFMVVCMSLKTVAQFLL-------SICNGPG------FDVVAL 162
           GAV W A  PC+PL+  +   V +S+ +VA+F L       ++  G G       D V L
Sbjct: 225 GAVVWAADAPCLPLLAGLLATVGVSMCSVARFFLLREEAAAALRGGSGRPASSSSDAVVL 284

Query: 161 LSFNWFVLGTLAYPVLPRIASIVAP 87
           LS NWF+LG L  P+LP  A  V P
Sbjct: 285 LSLNWFLLGVLTSPMLPGAAHAVFP 309


>tr|B6SHV5|B6SHV5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 292

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = -1

Query: 302 GAVAWEAQDPCIPLIGAVFMVVCMSLKTVAQFLLSICNGPGFD-VVALLSFNWFVLGTLA 126
           GAVAW A  PC+PL+  +F VV +S+++V++    +    G D  VALL  NWF+LG L 
Sbjct: 216 GAVAWSADAPCLPLLAGLFAVVAVSMRSVSR----LRRRAGDDGAVALLGLNWFLLGLLT 271

Query: 125 YPVLP 111
            P+LP
Sbjct: 272 SPMLP 276


>tr|A3A1S2|A3A1S2_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_004744 PE=4 SV=1
          Length = 331

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
 Frame = -1

Query: 302 GAVAWEAQDPCIPLIGAVFMVVCMSLKTVAQFLL-------SICNGPG------FDVVAL 162
           G V W A  PC+PL+  +   V +S+ +VA+F L       ++  G G       D V L
Sbjct: 226 GPVVWAADAPCLPLLAGLLATVGVSMCSVARFFLLREEAAAALRGGSGRPASSSSDAVVL 285

Query: 161 LSFNWFVLGTLAYPVLPRIASIVAP 87
           LS NWF+LG L  P+LP  A  V P
Sbjct: 286 LSLNWFLLGVLTSPMLPGAAHAVFP 310


>tr|Q6Z3B3|Q6Z3B3_ORYSJ Putative uncharacterized protein P0038F09.17
           OS=Oryza sativa subsp. japonica GN=P0038F09.17 PE=4 SV=1
          Length = 233

 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
 Frame = -1

Query: 302 GAVAWEAQDPCIPLIGAVFMVVCMSLKTVAQFLL------SICNG-PGF---DVVALLSF 153
           GAVAW A  PC+PL+  +F  + +S+ +V +F        ++  G P F   + V LLS 
Sbjct: 102 GAVAWAADAPCLPLLVGLFATMGVSMCSVTRFFFLRESAAALRGGRPTFSSSNTVPLLSL 161

Query: 152 NWFVLGTLAYPVLPRIASIVAPYGTSFGH 66
           NWF+LG L  P+LP  A  +        H
Sbjct: 162 NWFLLGILTSPMLPGAAHAIVSAANLSSH 190


>tr|Q7XK14|Q7XK14_ORYSJ OSJNBa0044K18.30 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBa0044K18.30 PE=4 SV=1
          Length = 233

 Score = 44.3 bits (103), Expect = 0.005
 Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
 Frame = +1

Query: 112 GNTGYARVPKTNQLKLRSATTSN--------PGPLHMDNRNC--ATVFKDIHTTINTAPM 261
           G+ G  R  + NQL+L  AT S         P     D+R    AT+  DI T  N +  
Sbjct: 27  GSMGKVRTLRRNQLRLSGATASEEEEEAGLPPWSAAADSRRKKRATLHMDISTVANISAS 86

Query: 262 RGMHGSCASHATAPTSKVRKTLNRLETIA 348
            G H + A+H TAPT+     L  L  +A
Sbjct: 87  NGKHNASAAHTTAPTAVAMPRLTMLHRLA 115