BP921178
Clone id YMU001_000146_F05
Library
Length 435
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000146_F05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CATGAAATGGGAGTGAGAACCGACCCGTTCATGATTATAAGCACAGTTAGCGAAAGTATG
ATCAGCCTATCAAACATTATGCACCACTTGCAATATTGTGCAGGTGCAAAGGCTCCTCTC
TATGCAAGTCTCTCTCTTCTGGGTGCGTAGATGCTGTTTTGGTGCAGTCTCCTTGCTGTG
AAGAAGGAGAGTTCTTTGTTTGCTTTGTGTTACGGGGTTCTTGCTTGCCACAAGGGCGGC
AGGAAGGGGTGATACCTATCTTTTCGAAGTAGATAAAACTTCAGTGAGGTGGTAGTTGCA
TGAGGTAATGCAATTAATAACACTTGAATCTAACATTATTCTAGAATCAGGGTTTGTATG
TTGGCAGATTAGTGTGGGGGCTGAGATATTATCATTGAGTCGAATCACCAGAGCTTTGTC
AAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q0TZN8
Definition sp|Q0TZN8|RMD11_PHANO Protein RMD11 OS=Phaeosphaeria nodorum
Align length 60
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921178|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_F05.
(420 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q0TZN8|RMD11_PHANO Protein RMD11 OS=Phaeosphaeria nodorum GN=... 31 2.2
sp|Q8BV79|LBA1_MOUSE Lupus brain antigen 1 OS=Mus musculus GN=Lb... 31 2.3
sp|Q9D952|EVPL_MOUSE Envoplakin OS=Mus musculus GN=Evpl PE=2 SV=2 30 3.9
sp|Q9BRR0|ZKSC3_HUMAN Zinc finger protein with KRAB and SCAN dom... 29 6.4
sp|A2BHJ4|CNO6L_DANRE CCR4-NOT transcription complex subunit 6-l... 29 8.4
sp|Q9QYC1|PCX1_MOUSE Pecanex-like protein 1 OS=Mus musculus GN=P... 29 8.6

>sp|Q0TZN8|RMD11_PHANO Protein RMD11 OS=Phaeosphaeria nodorum
GN=RMD11 PE=3 SV=1
Length = 870

Score = 30.8 bits (68), Expect = 2.2
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
Frame = -3

Query: 253 ITPSCRPCGKQEPRNTKQTKNSPSSQQGDCTKTASTHPEE------RDL--HREEPLHLH 98
IT S P + P S SSQ+ ++S P+ RD+ HR PLHLH
Sbjct: 678 ITASAAPSYRGSPTRASSDAGSTSSQRTTIALSSSQRPDSPSRLGVRDVKPHRPSPLHLH 737


>sp|Q8BV79|LBA1_MOUSE Lupus brain antigen 1 OS=Mus musculus GN=Lba1
PE=2 SV=3
Length = 2999

Score = 30.8 bits (68), Expect = 2.3
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 11/107 (10%)
Frame = -1

Query: 378 PTLICQHTNPDSRIMLDSSVINCITSCNYHLTEVLSTSKR*VSPLPAALVASKNP----- 214
PTL+ H ++ + I N HL ++ S+SK +S +PA LV N
Sbjct: 403 PTLLDGHARTVVDVLKRNKNFRAIDKINSHLEKLASSSKG-LSEIPAGLVCDVNRDCATT 461

Query: 213 ------VTQSKQRTLLLHSKETAPKQHLRTQKRETCIERSLCTCTIL 91
Q LLL +++ + + LR + C L CT++
Sbjct: 462 FIKFLLERQKWPEVLLLLTRKVSGQPQLRNGVIKDCDLSDLDICTVI 508


>sp|Q9D952|EVPL_MOUSE Envoplakin OS=Mus musculus GN=Evpl PE=2 SV=2
Length = 2035

Score = 30.0 bits (66), Expect = 3.9
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -1

Query: 255 VSPLPAALVASKNPVTQSKQRTLL-LHSKETAPKQHLRTQKRETCIERSLC 106
V+ L AA++ K+ + + K+RTL LH+K + + + TQ RET + +C
Sbjct: 1639 VTQLEAAILQEKDKIYE-KERTLRDLHTKVSREELNQETQTRETNLSTKIC 1688


>sp|Q9BRR0|ZKSC3_HUMAN Zinc finger protein with KRAB and SCAN
domains 3 OS=Homo sapiens GN=ZKSCAN3 PE=1 SV=2
Length = 538

Score = 29.3 bits (64), Expect = 6.4
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = -3

Query: 265 EKIGITPSCRPCGKQEPRNTKQTKNSPSSQQGDCTKTASTHPEERDLHREEPLH 104
E I P+C G+QE R ++ KN+ ++ C + + + L + +H
Sbjct: 283 EDIAQIPTCAEAGEQEGRLQRKQKNATGGRRHICHECGKSFAQSSGLSKHRRIH 336


>sp|A2BHJ4|CNO6L_DANRE CCR4-NOT transcription complex subunit 6-like
OS=Danio rerio GN=cnot6l PE=2 SV=1
Length = 559

Score = 28.9 bits (63), Expect = 8.4
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2

Query: 305 PHATTTSLKFYLLRKDRYHPFLPPLWQARTP*HKANKELSFFT 177
PH S F LL + YHP LPPL P H E T
Sbjct: 516 PHPHIPSDHFSLLAQLEYHPPLPPLNGLHLPVHSTACESKMLT 558


>sp|Q9QYC1|PCX1_MOUSE Pecanex-like protein 1 OS=Mus musculus GN=Pcnx
PE=2 SV=3
Length = 2344

Score = 28.9 bits (63), Expect = 8.6
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1

Query: 124 ASLSLLGA*MLFWCSLLAVKKESSLFALCYGVL 222
A+ SLL A F CS++AV + L+ LCYG L
Sbjct: 1159 ATTSLLAALYSFLCSIVAV---ALLYGLCYGAL 1188


tr_hit_id A5JZR7
Definition tr|A5JZR7|A5JZR7_PLAVI Putative uncharacterized protein OS=Plasmodium vivax
Align length 36
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921178|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_F05.
(420 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5JZR7|A5JZR7_PLAVI Putative uncharacterized protein OS=Plasm... 34 3.2
tr|Q2J7S0|Q2J7S0_FRASC Lantibiotic dehydratase-like OS=Frankia s... 33 9.2
tr|B4ID52|B4ID52_DROSE GM16791 OS=Drosophila sechellia GN=GM1679... 33 9.2
tr|Q9AT52|Q9AT52_BRANA Extensin-like protein OS=Brassica napus P... 33 9.2
tr|B0EPA7|B0EPA7_ENTDI Putative uncharacterized protein OS=Entam... 33 9.2

>tr|A5JZR7|A5JZR7_PLAVI Putative uncharacterized protein
OS=Plasmodium vivax GN=PVX_123210 PE=4 SV=1
Length = 1113

Score = 34.3 bits (77), Expect = 3.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3

Query: 232 CGKQEPRNTKQTKNSPSSQQGDCTKTASTHPEERDL 125
C K EP +Q+K+ PSS Q + +S+HP DL
Sbjct: 665 CSKSEPSKGEQSKDQPSSNQPGPNQPSSSHPNGGDL 700


>tr|Q2J7S0|Q2J7S0_FRASC Lantibiotic dehydratase-like OS=Frankia sp.
(strain CcI3) GN=Francci3_3315 PE=4 SV=1
Length = 1027

Score = 32.7 bits (73), Expect = 9.2
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = -1

Query: 276 LSTSKR*VSPLPAALVASKNPVTQSKQRTLLLHSKETAPKQHL 148
+ S R P+ AAL A++ PVT S+ RTLL+ +AP Q +
Sbjct: 189 IEVSVRHSRPVCAALEATRKPVTFSELRTLLMERFPSAPAQRI 231


>tr|B4ID52|B4ID52_DROSE GM16791 OS=Drosophila sechellia GN=GM16791
PE=4 SV=1
Length = 227

Score = 32.7 bits (73), Expect = 9.2
Identities = 24/97 (24%), Positives = 47/97 (48%)
Frame = -1

Query: 390 NISAPTLICQHTNPDSRIMLDSSVINCITSCNYHLTEVLSTSKR*VSPLPAALVASKNPV 211
N+ + L+C+ NPD + I+ + L+E+L + + A+ + +P
Sbjct: 131 NVISQFLLCKQINPD----FQQEELCSISKDSQELSELLEELQAHMPLTEASPESDLDPA 186

Query: 210 TQSKQRTLLLHSKETAPKQHLRTQKRETCIERSLCTC 100
+S+ + L++ P + R Q+R++C RSLC C
Sbjct: 187 QKSESSLVSLNT----PDWYAR-QRRKSCKSRSLCCC 218


>tr|Q9AT52|Q9AT52_BRANA Extensin-like protein OS=Brassica napus PE=2
SV=1
Length = 137

Score = 32.7 bits (73), Expect = 9.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -3

Query: 280 SFIYFEKIGITPSCRPCG----KQEPRNTKQTKNSPSSQQGDCTK 158
+ ++F I SC PCG +P+ T + SPSS +G C K
Sbjct: 13 NLLFFTTISACGSCTPCGGGCPSPKPKPTPKPTPSPSSGKGKCPK 57


>tr|B0EPA7|B0EPA7_ENTDI Putative uncharacterized protein
OS=Entamoeba dispar SAW760 GN=EDI_228240 PE=4 SV=1
Length = 494

Score = 32.7 bits (73), Expect = 9.2
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -3

Query: 307 YLMQLPPH*SFIYFEKIGITPSCRPCGKQEPRNTKQTKNSPSSQQGDCTKTASTHPEERD 128
++ QLPP ++ + + + RP K++P + SP+S C TAST E
Sbjct: 32 HIHQLPPTSKDVFDDDVTLVIDDRPSVKRKPTSAAGDLLSPNSGNSPCKSTASTPRSENG 91

Query: 127 L 125
L
Sbjct: 92 L 92