BP921014 |
Clone id |
YMU001_000144_E08 |
Library |
YMU01 |
Length |
348 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000144_E08. |
Accession |
BP921014 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AACCATACCAGTCTCAGCATCATCTTCTAAGCATGCAGAAAGTGGAGCCTCCTTCCTTGT GTATTCCAGTCCAACATATGATTCAGGTATGTTATCATGCAAGAAGATTCCATTAACGCT GCATTCTCGTTCATCACGTGAATTCTCTTTCAAAGGCGACTCGGCCAGTCCACAGACATC ACCATCTTCAGATTGCAATAAAAAAACTGATTTAAGATTGCTATTTGAGATGGTTCTCTT ATCAACAACTGGCTCCTCAAATGTTCTGCATTCTATTTCTGGCCCAGCATCCTCCTTATT CGCATGGGACTCTTTCAACGTAGGCATTGTTTTGAGAACCAAGTGAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5FNL1 |
Definition |
sp|Q5FNL1|PURQ_GLUOX Phosphoribosylformylglycinamidine synthase 1 OS=Gluconobacter oxydans |
Align length |
58 |
Score (bit) |
33.9 |
E-value |
0.26 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A1CUG8 |
Definition |
tr|A1CUG8|A1CUG8_ASPCL SWI/SNF family DNA-dependent ATPase Ris1, putative OS=Aspergillus clavatus |
Align length |
57 |
Score (bit) |
35.0 |
E-value |
1.9 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921014|Adiantum capillus-veneris mRNA, clone: YMU001_000144_E08. (348 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A1CUG8|A1CUG8_ASPCL SWI/SNF family DNA-dependent ATPase Ris1,... 35 1.9 tr|Q4RTI6|Q4RTI6_TETNG Chromosome 1 SCAF14998, whole genome shot... 35 1.9 tr|Q3MJK8|Q3MJK8_9ANNE Cement protein 3B variant 2 OS=Phragmatop... 35 2.4 tr|B4NDD5|B4NDD5_DROWI GK10211 OS=Drosophila willistoni GN=GK102... 35 2.4 tr|Q6BTQ3|Q6BTQ3_DEBHA DEHA2C16742p OS=Debaryomyces hansenii GN=... 34 3.2 tr|Q0CPW6|Q0CPW6_ASPTN Predicted protein OS=Aspergillus terreus ... 34 3.2 tr|A7RG17|A7RG17_NEMVE Predicted protein (Fragment) OS=Nematoste... 34 4.1 tr|A7TPB7|A7TPB7_VANPO Putative uncharacterized protein OS=Vande... 34 4.1 tr|Q8QCD7|Q8QCD7_9HIV1 Envelope glycoprotein (Fragment) OS=Human... 33 5.4 tr|B5VMN4|B5VMN4_YEAS6 YKR092Cp-like protein OS=Saccharomyces ce... 33 5.4 tr|B3LRG6|B3LRG6_YEAS1 Putative uncharacterized protein OS=Sacch... 33 5.4 tr|A7A051|A7A051_YEAS7 Nucleolar, serine-rich protein with a rol... 33 5.4 tr|B1B7V5|B1B7V5_CLOBO ATPase involved in DNA repair OS=Clostrid... 33 7.0 tr|A7J9L7|A7J9L7_9CONI APETALA2 L1 OS=Larix x marschlinsii PE=2 ... 33 7.1 tr|A0PY82|A0PY82_CLONN Exonuclease, putative OS=Clostridium novy... 33 9.2 tr|Q6BMP1|Q6BMP1_DEBHA DEHA2F03762p OS=Debaryomyces hansenii GN=... 33 9.2 tr|Q2U539|Q2U539_ASPOR Uncharacterized conserved protein TEX2 OS... 33 9.2 tr|B8NV29|B8NV29_ASPFL Putative uncharacterized protein OS=Asper... 33 9.2
>tr|A1CUG8|A1CUG8_ASPCL SWI/SNF family DNA-dependent ATPase Ris1, putative OS=Aspergillus clavatus GN=ACLA_086540 PE=4 SV=1 Length = 1253
Score = 35.0 bits (79), Expect = 1.9 Identities = 17/57 (29%), Positives = 26/57 (45%) Frame = -1
Query: 294 EDAGPEIECRTFEEPVVDKRTISNSNLKSVFLLQSEDGDVCGLAESPLKENSRDERE 124 ED EI+C V K+ + K + S+DGD GL + ++E DE + Sbjct: 951 EDGSVEIKCPNCRGKVDPKKVTDHQTFKKTYFPDSDDGDEVGLLKPLVEEEENDESD 1007
>tr|Q4RTI6|Q4RTI6_TETNG Chromosome 1 SCAF14998, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00029233001 PE=4 SV=1 Length = 1071
Score = 35.0 bits (79), Expect = 1.9 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = -2
Query: 203 FYCNLKMVMSVDWPSRL*KRIHVMNENAALME 108 F CN+KMV + WPS+ KR+ +++ AL E Sbjct: 102 FVCNVKMVKTAQWPSKTVKRVMLLSAGPALTE 133
>tr|Q3MJK8|Q3MJK8_9ANNE Cement protein 3B variant 2 OS=Phragmatopoma californica PE=2 SV=1 Length = 306
Score = 34.7 bits (78), Expect = 2.4 Identities = 28/100 (28%), Positives = 48/100 (48%) Frame = +2
Query: 14 SASSSKHAESGASFLVYSSPTYDSGMLSCKKIPLTLHSRSSREFSFKGDSASPQTSPSSD 193 S+SSS ++ S +S YSS + S S + +S SS S+ S+S +S SS Sbjct: 105 SSSSSSYSSSSSSSSSYSSSSSSSSYSSSSSSSSSSYSSSSSSSSYSSSSSSSSSSYSSS 164
Query: 194 CNKKTDLRLLFEMVLLSTTGSSNVLHSISGPASSLFAWDS 313 + + + S++ SS+ +S S +SS ++ S Sbjct: 165 SSSYSSSSSSY-----SSSSSSSSSYSSSSSSSSSYSSSS 199
>tr|B4NDD5|B4NDD5_DROWI GK10211 OS=Drosophila willistoni GN=GK10211 PE=4 SV=1 Length = 1025
Score = 34.7 bits (78), Expect = 2.4 Identities = 30/89 (33%), Positives = 37/89 (41%) Frame = +2
Query: 8 PVSASSSKHAESGASFLVYSSPTYDSGMLSCKKIPLTLHSRSSREFSFKGDSASPQTSPS 187 P +SSS S ASF+ SS + S S + S SS S S+S TSPS Sbjct: 851 PSPSSSSSGVSSSASFMGSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSSSNTSPS 910
Query: 188 SDCNKKTDLRLLFEMVLLSTTGSSNVLHS 274 S N T L + T S+ L S Sbjct: 911 S--NSTTSLSSTVVAGAIVTPSSTTTLSS 937
>tr|Q6BTQ3|Q6BTQ3_DEBHA DEHA2C16742p OS=Debaryomyces hansenii GN=DEHA2C16742g PE=4 SV=2 Length = 979
Score = 34.3 bits (77), Expect = 3.2 Identities = 21/69 (30%), Positives = 34/69 (49%) Frame = -1
Query: 345 HLVLKTMPTLKESHANKEDAGPEIECRTFEEPVVDKRTISNSNLKSVFLLQSEDGDVCGL 166 ++VL+ PT SH+ K P +E +P KR +SNS+ KS +S + + Sbjct: 894 NVVLQQAPTSNVSHSGKRILEPSLEQNVPTQPQDQKRNVSNSSGKSSTSKKSNNSGTAHI 953
Query: 165 AESPLKENS 139 + + KE S Sbjct: 954 SSNNGKEAS 962
>tr|Q0CPW6|Q0CPW6_ASPTN Predicted protein OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_04268 PE=4 SV=1 Length = 913
Score = 34.3 bits (77), Expect = 3.2 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -1
Query: 291 DAGPEIECRTFEEPVVDKRTISNSNLKSVFLLQSEDGDVCGLAESPLKENSRDERECS 118 +A P+ R FE P VD++++S NL S +S D + +P + + R CS Sbjct: 23 EAPPQSSFRVFERPSVDRKSVSEGNLLSKRFSESTQEDHDNIFAAPENQPKGNLRACS 80
>tr|A7RG17|A7RG17_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g73230 PE=4 SV=1 Length = 270
Score = 33.9 bits (76), Expect = 4.1 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 10/71 (14%) Frame = +3
Query: 9 QSQHHL---LSMQKVEPPSLCIPVQHM--IQVCYHARRFH*RCILVHHVNSLSKATRPVH 173 Q +HHL L +Q ++C+ +QH + VC+H + H +L HH+ H Sbjct: 170 QYRHHLAVCLYLQHRHHLAVCLYLQHRHHLAVCHHLQHRHHLAVLCHHLQ---------H 220
Query: 174 RH-----HHLQ 191 RH HHLQ Sbjct: 221 RHHLAVWHHLQ 231
>tr|A7TPB7|A7TPB7_VANPO Putative uncharacterized protein OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=Kpol_1019p24 PE=4 SV=1 Length = 228
Score = 33.9 bits (76), Expect = 4.1 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Frame = +3
Query: 21 HLLSMQKVEPPSLCIPVQHMI-QVCYHARRFH*RCILVHHVNSLSKAT----RPVHRHHH 185 HL ++PP + + + H I Q +H + H HH++ L + P+H+HHH Sbjct: 91 HLPHHHTLQPPQVTVQLHHHIHQHLHHTHQLH------HHIHQLLQVIVQHHHPIHQHHH 144
>tr|Q8QCD7|Q8QCD7_9HIV1 Envelope glycoprotein (Fragment) OS=Human immunodeficiency virus 1 GN=env PE=4 SV=1 Length = 206
Score = 33.5 bits (75), Expect = 5.4 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = -2
Query: 209 QFFYCNLKMVMSVDWPSRL*KRIHVMNENAALMESSCMITYLNHMLDWNTQGRRLH 42 +FFYCN + S W S +R++ N ++ SC I + +M W T G+ ++ Sbjct: 113 EFFYCNSTPLFSSTWYSNGTERLNNTEGNDTIITLSCRIKQIINM--WQTVGKAMY 166
>tr|B5VMN4|B5VMN4_YEAS6 YKR092Cp-like protein OS=Saccharomyces cerevisiae (strain AWRI1631) GN=AWRI1631_113140 PE=4 SV=1 Length = 386
Score = 33.5 bits (75), Expect = 5.4 Identities = 34/104 (32%), Positives = 48/104 (46%) Frame = +2
Query: 2 TIPVSASSSKHAESGASFLVYSSPTYDSGMLSCKKIPLTLHSRSSREFSFKGDSASPQTS 181 T P S+SSS+ + SG+S SS +SG S + S S E + DS S +S Sbjct: 138 TEPESSSSSESSSSGSS----SSSESESGSESDSDSSSSSSSSSDSESDSESDSQSSSSS 193
Query: 182 PSSDCNKKTDLRLLFEMVLLSTTGSSNVLHSISGPASSLFAWDS 313 SSD + +D S++ SS+ S S +SS DS Sbjct: 194 SSSDSSSDSD---------SSSSDSSSDSDSSSSSSSSSSDSDS 228
|