BP921008 |
Clone id |
YMU001_000144_E02 |
Library |
YMU01 |
Length |
477 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000144_E02. |
Accession |
BP921008 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GATCGTGTCGGCCATATTGTCTCATTTGTAGCGAACTCATGCACACAAAAAAGACTGCGT CTGATGTCAATGACAAAACTTTGTACACCAAAGCGCTTTGGTGGTCTGAATATTTTGGAC CTGCGTAGGCATGTCCTGGCTAGGAAGGCTATGCTATTGCCTACACTTACGCAAGAATTT CAGCCTTGGACTCTAATGTGTGCGCACTTGAGCCAGCATGTGGTTACGTCCTCCTTTGGT CATTGGCAACCATCTATTTGGAAGGTGGTATTTGGTAAGATGGATGGCCATATTCCTGGA TGCCCGCTTGCTTCCACCTTGCTCTCTGCCTGGAAACAGGTTAAGAATCATCTATCGTGG AATGCTCGAACGCAAGAAAACTCCCTTCGCTTGGAGAAACTTCATTGTAGCCGGGCCTTT TCTCTTACCTTGGTTGACCGCTCGCCTCGTGAAGCGTATTTCCTCTCCTGCCGGAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LU90 |
Definition |
sp|Q9LU90|FB188_ARATH F-box protein At3g26010 OS=Arabidopsis thaliana |
Align length |
52 |
Score (bit) |
30.8 |
E-value |
3.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A3A2V5 |
Definition |
tr|A3A2V5|A3A2V5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica |
Align length |
126 |
Score (bit) |
37.4 |
E-value |
0.37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921008|Adiantum capillus-veneris mRNA, clone: YMU001_000144_E02. (477 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A3A2V5|A3A2V5_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.37 tr|A3C0H7|A3C0H7_ORYSJ Putative uncharacterized protein OS=Oryza... 36 0.83 tr|B6GCK4|B6GCK4_9ACTN Putative uncharacterized protein OS=Colli... 36 1.1 tr|B2VWE6|B2VWE6_PYRTR Predicted protein OS=Pyrenophora tritici-... 35 1.9 tr|B4VCD7|B4VCD7_9ACTO Putative uncharacterized protein OS=Strep... 35 2.4 tr|Q0E467|Q0E467_ORYSJ Os02g0133700 protein OS=Oryza sativa subs... 35 2.4 tr|Q75J38|Q75J38_ORYSJ Putative uncharacterized protein OSJNBa00... 34 3.2 tr|Q15ZW6|Q15ZW6_PSEA6 Putative uncharacterized protein OS=Pseud... 34 4.2 tr|Q04DW3|Q04DW3_OENOB Glycosyltransferase OS=Oenococcus oeni (s... 33 5.4 tr|B6W5U5|B6W5U5_9BACE Putative uncharacterized protein OS=Bacte... 33 5.4 tr|A3A6Q7|A3A6Q7_ORYSJ Putative uncharacterized protein OS=Oryza... 33 5.4 tr|A5BRP5|A5BRP5_VITVI Putative uncharacterized protein OS=Vitis... 33 9.2 tr|A3CGV1|A3CGV1_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.2 tr|Q1GDY6|Q1GDY6_SILST Glycosyl transferase WecB/TagA/CpsF famil... 33 9.2 tr|B5XU67|B5XU67_KLEP3 Putative membrane protein OS=Klebsiella p... 33 9.2 tr|A6TE04|A6TE04_KLEP7 Putative integral membrane protein OS=Kle... 33 9.2 tr|Q0ZBA1|Q0ZBA1_KLEPN YghB (Fragment) OS=Klebsiella pneumoniae ... 33 9.2
>tr|A3A2V5|A3A2V5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_005127 PE=4 SV=1 Length = 1499
Score = 37.4 bits (85), Expect = 0.37 Identities = 29/126 (23%), Positives = 60/126 (47%), Gaps = 9/126 (7%) Frame = +1
Query: 64 MSMTKLCTPKRFGGLNILDLRRHVLARKA----MLLPTLTQEFQPWTLMCAHLSQHVVTS 231 ++ TK+C+PK +GGL + +L+ +A ++ M +LT+ +Q + C+ H+V + Sbjct: 171 VAWTKVCSPKDYGGLGVPNLKLMGIALRSRWTWMQRTSLTKPWQGLEIPCSQKELHLVAA 230
Query: 232 S----FGHWQPSI-WKVVFGKMDGHIPGCPLASTLLSAWKQVKNHLSWNARTQENSLRLE 396 S G+ Q + W+ D + G + + LS + V + ++ +RL Sbjct: 231 STVCQLGNGQTILFWE------DNWLQGGTIRAIALSIYDHVSTRIRKRRTVEKKVVRLR 284
Query: 397 KLHCSR 414 + S+ Sbjct: 285 RTVASK 290
>tr|A3C0H7|A3C0H7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028799 PE=3 SV=1 Length = 565
Score = 36.2 bits (82), Expect = 0.83 Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 4/102 (3%) Frame = +1
Query: 1 DRVGHIVSFVANSCTQKRLRLMSMTKLCTPKRFGGLNILDLRRHVLA-RKAMLLPTLTQE 177 D++ H + + + ++ ++C+PK +GGL I DL R +A R L T Sbjct: 350 DKIRHSFLWAGKAYANGGVCRVAWARVCSPKEYGGLGIPDLERLGIALRSRWLWQQRTSP 409
Query: 178 FQPW---TLMCAHLSQHVVTSSFGHWQPSIWKVVFGKMDGHI 294 +PW +++ + +++V+ S G + V+ + H+ Sbjct: 410 EKPWQGLSILVSQKERNLVSISMGSSIRLLAPAVYAAIPAHL 451
>tr|B6GCK4|B6GCK4_9ACTN Putative uncharacterized protein OS=Collinsella stercoris DSM 13279 GN=COLSTE_01827 PE=4 SV=1 Length = 321
Score = 35.8 bits (81), Expect = 1.1 Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 16/138 (11%) Frame = +1
Query: 22 SFVANSCTQKRLRLMSMTKLCTPKRFGGLNILDLRRHVLARKAMLLPTLTQEFQPWTLMC 201 + VA S R+ + KL + + + D+ RHV+ T E +PW + Sbjct: 158 ALVARSGENTRMLDNELKKLASMVEGPEITLADVERHVMR---------TAEVKPWEFLN 208
Query: 202 AHLSQHVVTS-SFGHWQPS-----IWK---------VVFGKMDGHIPGCPLASTL-LSAW 333 A ++ + S QP+ +W ++ +D G LASTL + +W Sbjct: 209 AVAARDLARSLELLALQPAKSEVRLWSLLVTRLRELIIAKSLDARGQGSQLASTLGVQSW 268
Query: 334 KQVKNHLSWNARTQENSL 387 QVKNHL W R + + L Sbjct: 269 -QVKNHLGWARRWRMDEL 285
>tr|B2VWE6|B2VWE6_PYRTR Predicted protein OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=PTRG_01508 PE=4 SV=1 Length = 599
Score = 35.0 bits (79), Expect = 1.9 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 6/88 (6%) Frame = +1
Query: 157 LPTLTQEFQPWTLMCAHLSQHVVTSSFGHWQPSIWKVVFGKMDGHIPGCPLASTLLSAWK 336 L TL + + + ++ S WQP W+ G+ G+ P + AW Sbjct: 68 LTTLCRNWDRKGFVARYIDPTEKIMSMNTWQPERWRGPQGQTMGYQPRIDSYEEIYGAWG 127
Query: 337 QVKNHLSWNA------RTQENSLRLEKL 402 + + L+W+A RT+E +EK+ Sbjct: 128 ERREVLAWSAGTQILLRTKETGANIEKI 155
>tr|B4VCD7|B4VCD7_9ACTO Putative uncharacterized protein OS=Streptomyces sp. Mg1 GN=SSAG_05556 PE=4 SV=1 Length = 311
Score = 34.7 bits (78), Expect = 2.4 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = +1
Query: 187 WTLMCAHLSQHVVTSSFGHWQPSIWKVVFGKMDGHIPGCPLASTLLSAWKQVKNHLSWNA 366 W + L VT++ W ++W+V FG+ I G A L++AW + L W A Sbjct: 104 WETVRVALCAAAVTAAHAWWVTALWEVPFGRAAAWIAGTG-ALPLVAAWHARRRSLGWGA 162
>tr|Q0E467|Q0E467_ORYSJ Os02g0133700 protein OS=Oryza sativa subsp. japonica GN=Os02g0133700 PE=4 SV=1 Length = 343
Score = 34.7 bits (78), Expect = 2.4 Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 4/61 (6%) Frame = +1
Query: 64 MSMTKLCTPKRFGGLNILDLRRHVLARKA----MLLPTLTQEFQPWTLMCAHLSQHVVTS 231 ++ TK+C+PK +GGL + +L+ +A ++ M +LT+ +Q + C+ H+V + Sbjct: 171 VAWTKVCSPKDYGGLGVPNLKLMGIALRSRWTWMQRTSLTKPWQGLEIPCSQKELHLVAA 230
Query: 232 S 234 S Sbjct: 231 S 231
>tr|Q75J38|Q75J38_ORYSJ Putative uncharacterized protein OSJNBa0066H15.12 (Retrotransposon protein, putative, LINE subclass) OS=Oryza sativa subsp. japonica GN=OSJNBa0066H15.12 PE=4 SV=1 Length = 343
Score = 34.3 bits (77), Expect = 3.2 Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 4/102 (3%) Frame = +1
Query: 1 DRVGHIVSFVANSCTQKRLRLMSMTKLCTPKRFGGLNILDLRRHVLA-RKAMLLPTLTQE 177 D++ + + T + ++ ++C+PK +GGL I DL R +A R L T Sbjct: 166 DKIRRSFLWAGKASTNGGVCRVAWARVCSPKEYGGLGIPDLERLGIALRSRWLWQQRTSP 225
Query: 178 FQPWTLMCAHLSQ---HVVTSSFGHWQPSIWKVVFGKMDGHI 294 +PW + +SQ ++V+ S G S+ V+ + + Sbjct: 226 EKPWQGLSIPVSQKERNLVSISMGSSIRSLAPAVYAAVPARL 267
>tr|Q15ZW6|Q15ZW6_PSEA6 Putative uncharacterized protein OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=Patl_0040 PE=3 SV=1 Length = 589
Score = 33.9 bits (76), Expect = 4.2 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -2
Query: 194 RVQG*NSCVSVGNSIAFLARTCLRRSKIFRPPKRFGVQSFVIDIRRSLFCVHEFATNETI 15 RVQ + V ++I L S+ F P KR SF ++ SL+ E A N+++ Sbjct: 177 RVQPKSVLVGFDDTIKKFITEDLHDSQFFAPFKRLAESSFSSAVQASLYTQGETAINQSV 236
Query: 14 WP 9 WP Sbjct: 237 WP 238
>tr|Q04DW3|Q04DW3_OENOB Glycosyltransferase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=OEOE_1500 PE=4 SV=1 Length = 337
Score = 33.5 bits (75), Expect = 5.4 Identities = 23/68 (33%), Positives = 30/68 (44%) Frame = +1
Query: 259 WKVVFGKMDGHIPGCPLASTLLSAWKQVKNHLSWNARTQENSLRLEKLHCSRAFSLTLVD 438 W+V G D HIP L ST + W +V N LS N + + S + R F L + Sbjct: 211 WQVFIGFYDMHIPISFLKSTFDNVWSEVGNLLSQNYQHRFRSQLDYSVWLMRYFQLASGN 270
Query: 439 RSPREAYF 462 PR F Sbjct: 271 FFPRRTRF 278
>tr|B6W5U5|B6W5U5_9BACE Putative uncharacterized protein OS=Bacteroides dorei DSM 17855 GN=BACDOR_04957 PE=4 SV=1 Length = 478
Score = 33.5 bits (75), Expect = 5.4 Identities = 17/40 (42%), Positives = 25/40 (62%) Frame = +1
Query: 160 PTLTQEFQPWTLMCAHLSQHVVTSSFGHWQPSIWKVVFGK 279 PTLT +F+P M + S+ VVT+ F H +I+ V+ GK Sbjct: 198 PTLTFDFKPLKGMLSFSSKLVVTNIFNHINNNIFTVILGK 237
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