BP920993 |
Clone id |
YMU001_000144_C06 |
Library |
YMU01 |
Length |
517 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000144_C06. |
Accession |
BP920993 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL547Contig1 |
Sequence |
TTTTTTTTTTCCAAAAACAGAACGAGGATCGGTCTTGCCCCGCAGTATATTTCTTTTGCT TTCAGTATTGCTTTACACATGATTAAATGCTGTCGAGGCTGGTTAAACAATTGTCTATTA TCAGTTAGCAACCTTCAGCCGTTAAATGTCATCGATGCGTCTTGGGCGAGTCCGAATGTG TTATGTCCAATATGCCCCGCGCACACGCATGAATAACAAGGTCATAAAGACAAAGAACCA TCGGCTTGAGATAAAGCCCTACTCCGGAATGCGACCCTGCACAGCAGAAACCAATTCCCG AGCGTCATCTAAAAGTGACCATACATCTAGATGCCCTGCCATGCTATTGCACTCTCTCAG AATTTCATCCATTCCTTTGCACTTTTCAATCAACTTCCTCTTTTGACGGACTGCCGCTGC TATCACAAACAATATTAAATCATCTGTGACATAGCTTCGCTTTCTTGATTTCCGCCAAGA CAAAGTTCTCACATGACTTATTCCTGCAGCCCTCTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A4VSK3 |
Definition |
sp|A4VSK3|RPOC_STRSY DNA-directed RNA polymerase subunit beta' OS=Streptococcus suis (strain 05ZYH33) |
Align length |
108 |
Score (bit) |
32.3 |
E-value |
1.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LR92 |
Definition |
tr|B8LR92|B8LR92_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
72 |
Score (bit) |
92.4 |
E-value |
1.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920993|Adiantum capillus-veneris mRNA, clone: YMU001_000144_C06. (507 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LR92|B8LR92_PICSI Putative uncharacterized protein OS=Picea... 92 1e-17 tr|A9NVH9|A9NVH9_PICSI Putative uncharacterized protein OS=Picea... 92 1e-17 tr|A7QEY2|A7QEY2_VITVI Chromosome chr16 scaffold_86, whole genom... 89 9e-17 tr|A7QJ65|A7QJ65_VITVI Chromosome chr2 scaffold_105, whole genom... 88 3e-16 tr|A5ADA4|A5ADA4_VITVI Putative uncharacterized protein OS=Vitis... 88 3e-16 tr|Q9FHY9|Q9FHY9_ARATH GTPase activator protein of Rab-like smal... 87 6e-16 tr|Q67YN2|Q67YN2_ARATH GTPase activator protein of Rab-like smal... 87 6e-16 tr|Q94HX6|Q94HX6_ORYSA Putative GTPase activating protein OS=Ory... 85 2e-15 tr|Q7XCR7|Q7XCR7_ORYSJ Os10g0518100 protein OS=Oryza sativa subs... 85 2e-15 tr|Q69NG6|Q69NG6_ORYSJ Os09g0528800 protein OS=Oryza sativa subs... 85 2e-15 tr|B8BHW1|B8BHW1_ORYSI Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|A3C0V1|A3C0V1_ORYSJ Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|A2Z3C3|A2Z3C3_ORYSI Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|B4FIM1|B4FIM1_MAIZE Putative uncharacterized protein OS=Zea m... 84 3e-15 tr|Q6Z9D7|Q6Z9D7_ORYSJ Os08g0547200 protein OS=Oryza sativa subs... 84 4e-15 tr|B8B9D2|B8B9D2_ORYSI Putative uncharacterized protein OS=Oryza... 84 4e-15 tr|A3BVG7|A3BVG7_ORYSJ Putative uncharacterized protein OS=Oryza... 84 4e-15 tr|Q9SG14|Q9SG14_ARATH Putative GTPase activator protein of Rab-... 83 7e-15 tr|Q4V3B4|Q4V3B4_ARATH At3g49350 (GTPase activating-like protein... 83 7e-15 tr|B4FE62|B4FE62_MAIZE Putative uncharacterized protein OS=Zea m... 83 7e-15 tr|A3C6I1|A3C6I1_ORYSJ Putative uncharacterized protein OS=Oryza... 79 9e-14 tr|Q9FIN3|Q9FIN3_ARATH GTPase activator-like protein of Rab-like... 77 4e-13 tr|Q67XX9|Q67XX9_ARATH GTPase activator like protein of Rab-like... 77 4e-13 tr|Q0WLJ6|Q0WLJ6_ARATH GTPase activator-like protein of Rab-like... 77 4e-13 tr|A9RYK1|A9RYK1_PHYPA Predicted protein (Fragment) OS=Physcomit... 77 4e-13 tr|Q9FJC7|Q9FJC7_ARATH GTPase activator protein of Rab-like smal... 76 8e-13 tr|Q94BY9|Q94BY9_ARATH AT5g53570/MNC6_11 OS=Arabidopsis thaliana... 76 8e-13 tr|Q56WX5|Q56WX5_ARATH GTPase activator protein of Rab-like smal... 76 8e-13 tr|A9TX53|A9TX53_PHYPA Predicted protein (Fragment) OS=Physcomit... 68 2e-10 tr|A8PT81|A8PT81_MALGO Putative uncharacterized protein OS=Malas... 36 1.2
>tr|B8LR92|B8LR92_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 455
Score = 92.4 bits (228), Expect = 1e-17 Identities = 44/72 (61%), Positives = 58/72 (80%), Gaps = 1/72 (1%) Frame = -2
Query: 470 SWRKSRKRSYVTDDLILFVIAAAVRQKRKLI-EKCKGMDEILRECNSMAGHLDVWSLLDD 294 +W+K ++R+ T DL+L+ IAA+V QKRKLI EK GMD+ILRECN+MAGHLD+W LLDD Sbjct: 384 AWKKGKQRAPPTSDLLLYAIAASVLQKRKLIIEKYTGMDDILRECNNMAGHLDIWKLLDD 443
Query: 293 ARELVSAVQGRI 258 A LV+A+ +I Sbjct: 444 AHALVAALHNKI 455
>tr|A9NVH9|A9NVH9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 585
Score = 92.4 bits (228), Expect = 1e-17 Identities = 44/72 (61%), Positives = 58/72 (80%), Gaps = 1/72 (1%) Frame = -2
Query: 470 SWRKSRKRSYVTDDLILFVIAAAVRQKRKLI-EKCKGMDEILRECNSMAGHLDVWSLLDD 294 +W+K ++R+ T DL+L+ IAA+V QKRKLI EK GMD+ILRECN+MAGHLD+W LLDD Sbjct: 514 AWKKGKQRAPPTSDLLLYAIAASVLQKRKLIIEKYTGMDDILRECNNMAGHLDIWKLLDD 573
Query: 293 ARELVSAVQGRI 258 A LV+A+ +I Sbjct: 574 AHALVAALHNKI 585
>tr|A7QEY2|A7QEY2_VITVI Chromosome chr16 scaffold_86, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037201001 PE=4 SV=1 Length = 513
Score = 89.4 bits (220), Expect = 9e-17 Identities = 44/72 (61%), Positives = 57/72 (79%), Gaps = 1/72 (1%) Frame = -2
Query: 470 SWRKSRKRSYVTDDLILFVIAAAVRQKRKLI-EKCKGMDEILRECNSMAGHLDVWSLLDD 294 +W + R+R+ TDDL+L+ IAA+V QKRKLI EK MDEI+RECNSMAGHLDVW LL+D Sbjct: 438 AWSRIRQRAPPTDDLLLYAIAASVLQKRKLIIEKYSSMDEIIRECNSMAGHLDVWKLLND 497
Query: 293 ARELVSAVQGRI 258 A +LV ++ +I Sbjct: 498 AHDLVVSLHDKI 509
>tr|A7QJ65|A7QJ65_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000523001 PE=4 SV=1 Length = 553
Score = 87.8 bits (216), Expect = 3e-16 Identities = 45/83 (54%), Positives = 59/83 (71%), Gaps = 1/83 (1%) Frame = -2
Query: 503 RAAGISHVRTLSWRKSRKRSYVTDDLILFVIAAAVRQKRKLI-EKCKGMDEILRECNSMA 327 +AA + + +W + R R+ TDDL+L+ IAA V Q+RKLI EK MDEI+RECNSMA Sbjct: 471 QAAVRAGIAKSTWGRIRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIIRECNSMA 530
Query: 326 GHLDVWSLLDDARELVSAVQGRI 258 GHLDVW LLDDA +LV + ++ Sbjct: 531 GHLDVWKLLDDAHDLVVTLHDKV 553
>tr|A5ADA4|A5ADA4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025995 PE=4 SV=1 Length = 266
Score = 87.8 bits (216), Expect = 3e-16 Identities = 45/83 (54%), Positives = 59/83 (71%), Gaps = 1/83 (1%) Frame = -2
Query: 503 RAAGISHVRTLSWRKSRKRSYVTDDLILFVIAAAVRQKRKLI-EKCKGMDEILRECNSMA 327 +AA + + +W + R R+ TDDL+L+ IAA V Q+RKLI EK MDEI+RECNSMA Sbjct: 184 QAAVRAGIAKSTWGRIRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIIRECNSMA 243
Query: 326 GHLDVWSLLDDARELVSAVQGRI 258 GHLDVW LLDDA +LV + ++ Sbjct: 244 GHLDVWKLLDDAHDLVVTLHDKV 266
>tr|Q9FHY9|Q9FHY9_ARATH GTPase activator protein of Rab-like small GTPases-like protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 506
Score = 86.7 bits (213), Expect = 6e-16 Identities = 44/83 (53%), Positives = 61/83 (73%), Gaps = 1/83 (1%) Frame = -2
Query: 503 RAAGISHVRTLSWRKSRKRSYVTDDLILFVIAAAVRQKRK-LIEKCKGMDEILRECNSMA 327 +AA + + +W + R R+ T+DL+L+ IAA+V Q+RK +IEK GMDEI++ECNSMA Sbjct: 424 QAAIRTGIAKATWGRIRLRAPPTEDLLLYAIAASVLQRRKTIIEKYSGMDEIMKECNSMA 483
Query: 326 GHLDVWSLLDDARELVSAVQGRI 258 GHLDVW LLDDA +LV + +I Sbjct: 484 GHLDVWKLLDDAHDLVVNLHDKI 506
>tr|Q67YN2|Q67YN2_ARATH GTPase activator protein of Rab-like small GTPases-like protein OS=Arabidopsis thaliana GN=At5g41940 PE=2 SV=1 Length = 549
Score = 86.7 bits (213), Expect = 6e-16 Identities = 44/83 (53%), Positives = 61/83 (73%), Gaps = 1/83 (1%) Frame = -2
Query: 503 RAAGISHVRTLSWRKSRKRSYVTDDLILFVIAAAVRQKRK-LIEKCKGMDEILRECNSMA 327 +AA + + +W + R R+ T+DL+L+ IAA+V Q+RK +IEK GMDEI++ECNSMA Sbjct: 467 QAAIRTGIAKATWGRIRLRAPPTEDLLLYAIAASVLQRRKTIIEKYSGMDEIMKECNSMA 526
Query: 326 GHLDVWSLLDDARELVSAVQGRI 258 GHLDVW LLDDA +LV + +I Sbjct: 527 GHLDVWKLLDDAHDLVVNLHDKI 549
>tr|Q94HX6|Q94HX6_ORYSA Putative GTPase activating protein OS=Oryza sativa GN=OSJNBa0076F20.7 PE=4 SV=1 Length = 586
Score = 85.1 bits (209), Expect = 2e-15 Identities = 46/83 (55%), Positives = 58/83 (69%), Gaps = 1/83 (1%) Frame = -2
Query: 503 RAAGISHVRTLSWRKSRKRSYVTDDLILFVIAAAVRQKRKLI-EKCKGMDEILRECNSMA 327 +AA + + S K R + TDDL+L+ IAA+V QKRKLI E MDEI+RECNSMA Sbjct: 503 QAANRAGIAKSSLGKLRLGAPPTDDLLLYAIAASVLQKRKLIIESYSSMDEIIRECNSMA 562
Query: 326 GHLDVWSLLDDARELVSAVQGRI 258 G LD+W LLDDA +LV+ + GRI Sbjct: 563 GQLDIWKLLDDAHDLVTTLHGRI 585
>tr|Q7XCR7|Q7XCR7_ORYSJ Os10g0518100 protein OS=Oryza sativa subsp. japonica GN=Os10g0518100 PE=2 SV=1 Length = 586
Score = 85.1 bits (209), Expect = 2e-15 Identities = 46/83 (55%), Positives = 58/83 (69%), Gaps = 1/83 (1%) Frame = -2
Query: 503 RAAGISHVRTLSWRKSRKRSYVTDDLILFVIAAAVRQKRKLI-EKCKGMDEILRECNSMA 327 +AA + + S K R + TDDL+L+ IAA+V QKRKLI E MDEI+RECNSMA Sbjct: 503 QAANRAGIAKSSLGKLRLGAPPTDDLLLYAIAASVLQKRKLIIESYSSMDEIIRECNSMA 562
Query: 326 GHLDVWSLLDDARELVSAVQGRI 258 G LD+W LLDDA +LV+ + GRI Sbjct: 563 GQLDIWKLLDDAHDLVTTLHGRI 585
>tr|Q69NG6|Q69NG6_ORYSJ Os09g0528800 protein OS=Oryza sativa subsp. japonica GN=OJ1531_B07.10 PE=2 SV=1 Length = 579
Score = 85.1 bits (209), Expect = 2e-15 Identities = 44/65 (67%), Positives = 50/65 (76%), Gaps = 1/65 (1%) Frame = -2
Query: 470 SWRKSRKRSYVTDDLILFVIAAAVRQKRKLI-EKCKGMDEILRECNSMAGHLDVWSLLDD 294 +W K R R+ TDDL+L+ IAA V Q+RKLI EK MDEILRECNSMAG LDVW LLDD Sbjct: 508 TWAKIRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEILRECNSMAGQLDVWRLLDD 567
Query: 293 ARELV 279 A +LV Sbjct: 568 AHDLV 572
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