BP920990
Clone id YMU001_000144_C03
Library
Length 445
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000144_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGGCGTGGTCGGGGCCGAGGTAGATGAAATGAGTGCCATGCTGCCGAAGTTCTGATATAT
CCAATCGGCACAGGGGTTTCAAAATCTAGTACTACATTTTATGCTGATCCTATCGCTGCA
TGTGTGCTGTGTTTGAGACTCCCAGCAGTCTTCGTATGACTTCTGTACTTACGCTCGCAC
TTAGTCTACACATTTACAGAAATTTGATTATAGAGACCCATAGTCCTAAGATGTGCCTGA
ATCCATCTGAATGCTCCGGCTTTGTCAATCAATGGTTTCAGGTTTAGACAACAACTTCCG
TATCCCCGGAAGGTTTCTAGGCCATTTTCTTCTCCGTCACTGGTATCGTTGTCCAAGCAG
ATGTATTGTGCATAAGAATTGATGAATTCAGTGATCTATGCATCAATAGAAAACTGTGTA
TATCTGGTTGTGCTCCCCTTCACGG
■■Homology search results ■■ -
sp_hit_id Q80VP0
Definition sp|Q80VP0|K1358_MOUSE UPF0584 protein KIAA1358 OS=Mus musculus
Align length 22
Score (bit) 26.6
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920990|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_C03.
(445 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q80VP0|K1358_MOUSE UPF0584 protein KIAA1358 OS=Mus musculus G... 27 1.9
sp|Q2V3H2|PUP7_ARATH Probable purine permease 7 OS=Arabidopsis t... 30 4.6
sp|Q8RY74|PUP21_ARATH Probable purine permease 21 OS=Arabidopsis... 30 4.6
sp|Q5ZID5|UBP28_CHICK Ubiquitin carboxyl-terminal hydrolase 28 O... 30 6.0
sp|Q04CN9|LDH_LACDB L-lactate dehydrogenase OS=Lactobacillus del... 29 10.0
sp|Q12739|LAC2_PLEOS Laccase-2 OS=Pleurotus ostreatus GN=POX2 PE... 29 10.0

>sp|Q80VP0|K1358_MOUSE UPF0584 protein KIAA1358 OS=Mus musculus
GN=Kiaa1358 PE=2 SV=1
Length = 1166

Score = 26.6 bits (57), Expect(2) = 1.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1

Query: 73 LCRLDISELRQHGTHFIYLGPD 8
LCRL +SEL G+ ++++G D
Sbjct: 970 LCRLGVSELNPAGSSWLHVGTD 991



Score = 23.1 bits (48), Expect(2) = 1.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1

Query: 253 HSDGFRHILGLWVSIIKFL*MCRLSAS 173
H+DG H + LW K +CRL S
Sbjct: 950 HADGRGHNVALWAVSDKGDVLCRLGVS 976


>sp|Q2V3H2|PUP7_ARATH Probable purine permease 7 OS=Arabidopsis
thaliana GN=PUP7 PE=2 SV=1
Length = 390

Score = 30.0 bits (66), Expect = 4.6
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1

Query: 277 FRFRQQLPYPRKVSRPFS-SPSLVSLSKQMYCA*ELMNSVIYASIENCVYLVVLPFT 444
FRF ++ P+ FS SPS +L+ C L+++ Y S +YL V F+
Sbjct: 91 FRFFSRIRQPKSTDTNFSQSPSFTTLASVYLCTGLLVSAYAYLSAVGLLYLPVSTFS 147


>sp|Q8RY74|PUP21_ARATH Probable purine permease 21 OS=Arabidopsis
thaliana GN=PUP21 PE=2 SV=1
Length = 377

Score = 30.0 bits (66), Expect = 4.6
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1

Query: 277 FRFRQQLPYPRKVSRPFS-SPSLVSLSKQMYCA*ELMNSVIYASIENCVYLVVLPFT 444
FRF ++ P+ FS SPS +L+ C L+++ Y S +YL V F+
Sbjct: 88 FRFFSRIRQPKSTDTNFSQSPSFTTLASVYLCTGLLVSAYAYLSAVGLLYLPVSTFS 144


>sp|Q5ZID5|UBP28_CHICK Ubiquitin carboxyl-terminal hydrolase 28
OS=Gallus gallus GN=USP28 PE=2 SV=1
Length = 1047

Score = 29.6 bits (65), Expect = 6.0
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1

Query: 268 INGFRFRQQLPYPRKVSRPFSSPSLVSLSKQMYCA*ELMNS 390
++ F F Q L P K+ P + + + +YC+ EL+ +
Sbjct: 361 LSRFEFNQSLGQPEKIHTKLEFPQTIFMDRYLYCSKELIQT 401


>sp|Q04CN9|LDH_LACDB L-lactate dehydrogenase OS=Lactobacillus
delbrueckii subsp. bulgaricus (strain ATCC BAA-365)
GN=ldh PE=3 SV=1
Length = 307

Score = 28.9 bits (63), Expect = 10.0
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -3

Query: 329 ENGLETFRGYGSCCLNLKPLIDKAG----AFRWIQAHLRTMG 216
E+G +F + S +N KPL+D G A I+AH+R G
Sbjct: 173 EHGDSSFENFSSAVVNGKPLLDYPGMTEAALDEIEAHVREKG 214


>sp|Q12739|LAC2_PLEOS Laccase-2 OS=Pleurotus ostreatus GN=POX2 PE=1
SV=1
Length = 533

Score = 28.9 bits (63), Expect = 10.0
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3

Query: 137 LKHSTHAAIGSA*NVVLDFETPVPIGYIRTSAAWHSFHLPRPRP 6
L H HAAIG A N+ + E P G+ R++ S P P
Sbjct: 17 LLHGAHAAIGPAGNMYIVNEDVSPDGFARSAVVARSVPATDPTP 60


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920990|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_C03.
(445 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******