BP920928
Clone id YMU001_000143_E03
Library
Length 333
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000143_E03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GATGTCCATGAGCTTGGATCTTCACATTACAGCATCCATCTTCATCTTCATCTTCATCAT
CTTCATATGGAATCTTTAGAGAATCTTTGAGGAATCTTCATGGAATCTTTGTGGAAGTGT
CGTTGAAAGGTTGACCTGTCAACACTCTCCCCCTCCGAATTCTTGTCGTCCCCGACAAGA
CTCTATGTCTGCAGTGGCCTTGACAAGTGCTTTTGGCTTTGGTGTAGGTTGAAGCTGTAG
TTGTTACAGTTGCTTCTACTAGATGCTTTGTATGTTGTAGAGGTACCTTTTTCTTGTACA
TGTAGTGTAGTTGAAGCCATATCTCTTCCCCTT
■■Homology search results ■■ -
sp_hit_id Q87SK0
Definition sp|Q87SK0|GLNE_VIBPA Glutamate-ammonia-ligase adenylyltransferase OS=Vibrio parahaemolyticus
Align length 55
Score (bit) 32.3
E-value 0.76
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920928|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_E03.
(333 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q87SK0|GLNE_VIBPA Glutamate-ammonia-ligase adenylyltransferas... 32 0.76
sp|Q5SUS0|FBW10_MOUSE F-box/WD repeat-containing protein 10 OS=M... 29 6.4

>sp|Q87SK0|GLNE_VIBPA Glutamate-ammonia-ligase adenylyltransferase
OS=Vibrio parahaemolyticus GN=glnE PE=3 SV=1
Length = 947

Score = 32.3 bits (72), Expect = 0.76
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = -2

Query: 269 KASSRSNCNNYSFNLHQSQKHLSRPLQT*-SLVGDDKNSEGESVDRSTFQRHFHK 108
K ++ ++ + Q+Q+H+++ Q +L+GDD+ EG ST RHFH+
Sbjct: 407 KLATAMQLESWDLLIEQTQQHMNKVHQVFETLIGDDEEDEG-----STIARHFHE 456


>sp|Q5SUS0|FBW10_MOUSE F-box/WD repeat-containing protein 10 OS=Mus
musculus GN=Fbxw10 PE=2 SV=1
Length = 1030

Score = 29.3 bits (64), Expect = 6.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2

Query: 167 DKNSEGESVDRSTFQRHFHKDSMKIPQRFSKDSI 66
++ S G+ RST Q H KDS+ Q FSK +
Sbjct: 723 EETSLGDEHSRSTIQGHSLKDSVSSKQEFSKSRV 756


tr_hit_id Q2H4K4
Definition tr|Q2H4K4|Q2H4K4_CHAGB Putative uncharacterized protein OS=Chaetomium globosum
Align length 25
Score (bit) 32.7
E-value 9.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920928|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_E03.
(333 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2H4K4|Q2H4K4_CHAGB Putative uncharacterized protein OS=Chaet... 33 9.4

>tr|Q2H4K4|Q2H4K4_CHAGB Putative uncharacterized protein
OS=Chaetomium globosum GN=CHGG_06411 PE=4 SV=1
Length = 1661

Score = 32.7 bits (73), Expect = 9.4
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2

Query: 113 GSVVERLTCQHSPPPNSCRPRQDSM 187
G +++ LT +HSPPP S PR+ +M
Sbjct: 532 GPILDSLTVKHSPPPRSISPRKSAM 556