BP920916 |
Clone id |
YMU001_000143_C11 |
Library |
YMU01 |
Length |
580 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000143_C11. |
Accession |
BP920916 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGCAAAAGGTGCCAAACCAAAATGGAAAGAAAGCCAATGCAAGTTTGCCCAAGAAAAAAT TGGTCAAGAGGAAGAGAGGAACAGTAGGGCAAAGGGGTGACCGAAAGCAAAGGTTTTCAA AAAAGTAGGCTTACGTTGCATGCCCGGTCTGTGATTGAACATAGCCTGTCACAATAGAGG TTCTTTGGACAGCACCGACAAATTTTGTGTGGATACATCTCATTCACTTTGTACACCGGG GAAGCTTGCGTCGAACCCCATGACGGGGCGTGATTTTTTGTTCTCAAAGTTCTTTCTTCT TGTTGCCTTGGAGGGTTGGGAGGAACTTTTTTCTGTTCTTGAGGCCGTTTACCGACCATC GTGGGGTATTTTTCAGGTCCAGTTCTGGGTTCTTTTAGCAATGGACGAGCTAAGAAAACC ACCGATTGAAGTTTGCCCCTTTTTCCTAACCAGACCATTTGGTCATAACTAACCAATATA TTGACAACGGCTATGATGTAAATTAGTTGAGGTGACTGCTGAGGCAAAAATTATTCGAGT GGCTTGGTCCTGATTAACATCAAACTATGCAGACGAGTAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q1LZI2 |
Definition |
sp|Q1LZI2|S35F3_MOUSE Solute carrier family 35 member F3 OS=Mus musculus |
Align length |
56 |
Score (bit) |
33.5 |
E-value |
0.79 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6CA95 |
Definition |
tr|Q6CA95|Q6CA95_YARLI YALI0D04785p OS=Yarrowia lipolytica |
Align length |
52 |
Score (bit) |
39.3 |
E-value |
0.16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920916|Adiantum capillus-veneris mRNA, clone: YMU001_000143_C11. (580 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6CA95|Q6CA95_YARLI YALI0D04785p OS=Yarrowia lipolytica GN=YA... 39 0.16 tr|B4GM03|B4GM03_DROPE GL12680 OS=Drosophila persimilis GN=GL126... 37 0.79 tr|B0WDW8|B0WDW8_CULQU Putative uncharacterized protein OS=Culex... 37 1.0 tr|A0D119|A0D119_PARTE Chromosome undetermined scaffold_331, who... 37 1.0 tr|Q029V8|Q029V8_SOLUE ATP-dependent DNA helicase, Rep family OS... 35 2.3 tr|Q54WG7|Q54WG7_DICDI Putative uncharacterized protein OS=Dicty... 35 3.0 tr|B4NUH3|B4NUH3_DROSI GD24821 OS=Drosophila simulans GN=GD24821... 35 3.0 tr|B4INB6|B4INB6_DROSE GM16238 OS=Drosophila sechellia GN=GM1623... 35 3.0 tr|Q6ZIR3|Q6ZIR3_ORYSJ Os02g0711900 protein OS=Oryza sativa subs... 34 5.1 tr|B8AHC4|B8AHC4_ORYSI Putative uncharacterized protein OS=Oryza... 34 5.1 tr|A5AW07|A5AW07_VITVI Putative uncharacterized protein OS=Vitis... 34 5.1 tr|A3AAM9|A3AAM9_ORYSJ Putative uncharacterized protein OS=Oryza... 34 5.1 tr|A1CDR9|A1CDR9_ASPCL RING finger domain protein OS=Aspergillus... 34 5.1 tr|Q9SCR7|Q9SCR7_ARATH Proline-rich protein OS=Arabidopsis thali... 34 6.7 tr|Q1PEG5|Q1PEG5_ARATH Proline-rich family protein OS=Arabidopsi... 34 6.7 tr|Q26034|Q26034_PLAFA Variant-specific surface protein OS=Plasm... 34 6.7 tr|B6LW93|B6LW93_BRAFL Putative uncharacterized protein OS=Branc... 34 6.7 tr|A4H6X1|A4H6X1_LEIBR Putative uncharacterized protein OS=Leish... 34 6.7 tr|Q59M77|Q59M77_CANAL Putative uncharacterized protein OS=Candi... 34 6.7 tr|B0RTH9|B0RTH9_XANCB Ribonuclease E OS=Xanthomonas campestris ... 33 8.7
>tr|Q6CA95|Q6CA95_YARLI YALI0D04785p OS=Yarrowia lipolytica GN=YALI0D04785g PE=3 SV=1 Length = 603
Score = 39.3 bits (90), Expect = 0.16 Identities = 21/52 (40%), Positives = 28/52 (53%) Frame = -3
Query: 446 GKRGKLQSVVFLARPLLKEPRTGPEKYPTMVGKRPQEQKKVPPNPPRQQEER 291 G RG+ SV F PL KEP GP+ G+ P PP PP+QQ+++ Sbjct: 414 GSRGRAVSVYF--DPLAKEPAAGPD------GQAPPTHTSAPPPPPQQQQQQ 457
>tr|B4GM03|B4GM03_DROPE GL12680 OS=Drosophila persimilis GN=GL12680 PE=4 SV=1 Length = 1383
Score = 37.0 bits (84), Expect = 0.79 Identities = 17/66 (25%), Positives = 34/66 (51%) Frame = -3
Query: 434 KLQSVVFLARPLLKEPRTGPEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKNHAPSWG 255 KLQ++ P + +T P+K+P ++P +Q + P +QQ+++ + + H P Sbjct: 85 KLQTLKQNTDPSERREQTTPQKHPPQQQQQPTQQLQTQPQLQQQQQQQQQQQQQHLPQQA 144
Query: 254 STQASP 237 S + P Sbjct: 145 SPMSGP 150
>tr|B0WDW8|B0WDW8_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ005092 PE=4 SV=1 Length = 1128
Score = 36.6 bits (83), Expect = 1.0 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Frame = -3
Query: 407 RPLLKEPRTGPEKYPTMVGKRPQEQK--KVPPNPPRQQEERTLRTKNHAPSWGSTQASPV 234 +PLL P T + PT K P+ +K K PP P R+ E + H P + + P Sbjct: 451 KPLLMPPDTITQFLPT---KSPKSEKGEKAPPKPDRESPEEG--PQQHLPFYPTVDGKPP 505
Query: 233 YKVNEMYPHK 204 KV + PHK Sbjct: 506 PKVPQEKPHK 515
>tr|A0D119|A0D119_PARTE Chromosome undetermined scaffold_331, whole genome shotgun sequence. (Fragment) OS=Paramecium tetraurelia GN=GSPATT00039151001 PE=4 SV=1 Length = 1053
Score = 36.6 bits (83), Expect = 1.0 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = -3
Query: 224 NEMYPHKICRCCPKNLYCDRLCSITDRACNVSLLF*KPLLSVTPLPYC-SSLPLDQFFLG 48 N +Y K CP LY D +TDR C S P ++V YC S+ ++ F G Sbjct: 385 NYLYQQKCSPTCPSQLYTD----LTDRTCKQSC----PSITVIQGQYCKSNCDVNNFLYG 436
Query: 47 QTCI 36 Q C+ Sbjct: 437 QLCV 440
>tr|Q029V8|Q029V8_SOLUE ATP-dependent DNA helicase, Rep family OS=Solibacter usitatus (strain Ellin6076) GN=Acid_1174 PE=4 SV=1 Length = 788
Score = 35.4 bits (80), Expect = 2.3 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -3
Query: 377 PEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKNHAPSWGS 252 P +YP +G P K+VPP PP ++ R T H P +G+ Sbjct: 711 PPQYPRPIGSAPMPMKQVPPPPPPRKGARAGMTVEH-PKYGT 751
>tr|Q54WG7|Q54WG7_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0205972 PE=4 SV=1 Length = 1377
Score = 35.0 bits (79), Expect = 3.0 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = -3
Query: 395 KEPRTGPEKYPTMVGKR--PQEQKKVPPNPPRQQEERTLRTKNHAPSWGSTQASPVYKVN 222 K P T P+K K+ P QK+ PP P++Q+ T K AP+ Q +P Sbjct: 453 KTPPTTPQKQTPTPQKQTPPTPQKQTPPTTPQKQKAPTTPQKQKAPTTPQKQIAPTTPQK 512
Query: 221 EMYP 210 ++ P Sbjct: 513 QIAP 516
>tr|B4NUH3|B4NUH3_DROSI GD24821 OS=Drosophila simulans GN=GD24821 PE=4 SV=1 Length = 858
Score = 35.0 bits (79), Expect = 3.0 Identities = 23/85 (27%), Positives = 35/85 (41%) Frame = -3
Query: 434 KLQSVVFLARPLLKEPRTGPEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKNHAPSWG 255 K++++ FL + + P K V + + + VPPNPP Q N PS Sbjct: 571 KVRTIAFLWEDYISDSTLPPNKTIWSVERHELKPRHVPPNPPAQS-----NPTNSMPS-- 623
Query: 254 STQASPVYKVNEMYPHKICRCCPKN 180 + A P Y + YP + P N Sbjct: 624 NVTAPPTYWIPNNYPMQHANLDPNN 648
>tr|B4INB6|B4INB6_DROSE GM16238 OS=Drosophila sechellia GN=GM16238 PE=4 SV=1 Length = 220
Score = 35.0 bits (79), Expect = 3.0 Identities = 23/87 (26%), Positives = 35/87 (40%) Frame = -3
Query: 434 KLQSVVFLARPLLKEPRTGPEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKNHAPSWG 255 K++++ F+ + P K V + + + VPPNPP Q N PS Sbjct: 137 KVRTIAFIWENYRSDSTLPPNKTIWSVERHELKPRHVPPNPPAQS-----NPTNSMPS-- 189
Query: 254 STQASPVYKVNEMYPHKICRCCPKNLY 174 + A P Y + YP + P N Y Sbjct: 190 NVTAPPTYWIQNNYPMQHANLHPNNQY 216
>tr|Q6ZIR3|Q6ZIR3_ORYSJ Os02g0711900 protein OS=Oryza sativa subsp. japonica GN=OJ1038_A06.27 PE=4 SV=1 Length = 249
Score = 34.3 bits (77), Expect = 5.1 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%) Frame = -3
Query: 386 RTGPEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKN----HAPSWGSTQASPVY 231 R GPE P ++ Q+Q++ PP+QQE+ T + N HAP+ +T A P Y Sbjct: 135 RFGPEPPPPEQQQQQQQQQQ----PPQQQEQTTQQAPNAGAEHAPARHATSAPPGY 186
>tr|B8AHC4|B8AHC4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08664 PE=4 SV=1 Length = 249
Score = 34.3 bits (77), Expect = 5.1 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%) Frame = -3
Query: 386 RTGPEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKN----HAPSWGSTQASPVY 231 R GPE P ++ Q+Q++ PP+QQE+ T + N HAP+ +T A P Y Sbjct: 135 RFGPEPPPPEQQQQQQQQQQ----PPQQQEQTTQQAPNAGAEHAPARHATSAPPGY 186
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