BP920916
Clone id YMU001_000143_C11
Library
Length 580
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000143_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGCAAAAGGTGCCAAACCAAAATGGAAAGAAAGCCAATGCAAGTTTGCCCAAGAAAAAAT
TGGTCAAGAGGAAGAGAGGAACAGTAGGGCAAAGGGGTGACCGAAAGCAAAGGTTTTCAA
AAAAGTAGGCTTACGTTGCATGCCCGGTCTGTGATTGAACATAGCCTGTCACAATAGAGG
TTCTTTGGACAGCACCGACAAATTTTGTGTGGATACATCTCATTCACTTTGTACACCGGG
GAAGCTTGCGTCGAACCCCATGACGGGGCGTGATTTTTTGTTCTCAAAGTTCTTTCTTCT
TGTTGCCTTGGAGGGTTGGGAGGAACTTTTTTCTGTTCTTGAGGCCGTTTACCGACCATC
GTGGGGTATTTTTCAGGTCCAGTTCTGGGTTCTTTTAGCAATGGACGAGCTAAGAAAACC
ACCGATTGAAGTTTGCCCCTTTTTCCTAACCAGACCATTTGGTCATAACTAACCAATATA
TTGACAACGGCTATGATGTAAATTAGTTGAGGTGACTGCTGAGGCAAAAATTATTCGAGT
GGCTTGGTCCTGATTAACATCAAACTATGCAGACGAGTAC
■■Homology search results ■■ -
sp_hit_id Q1LZI2
Definition sp|Q1LZI2|S35F3_MOUSE Solute carrier family 35 member F3 OS=Mus musculus
Align length 56
Score (bit) 33.5
E-value 0.79
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920916|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_C11.
(580 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q1LZI2|S35F3_MOUSE Solute carrier family 35 member F3 OS=Mus ... 33 0.79
sp|P40317|SOK1_YEAST Protein SOK1 OS=Saccharomyces cerevisiae GN... 33 1.3
sp|Q8IY50|S35F3_HUMAN Solute carrier family 35 member F3 OS=Homo... 32 1.8
sp|Q62737|CY24A_RAT Cytochrome b-245 light chain OS=Rattus norve... 32 3.0
sp|Q9NRM1|ENAM_HUMAN Enamelin OS=Homo sapiens GN=ENAM PE=2 SV=3 31 3.9
sp|P09282|UL32_VZVD Probable major envelope glycoprotein 26 OS=V... 30 6.7
sp|Q8BXJ2|TREF1_MOUSE Transcriptional-regulating factor 1 OS=Mus... 30 6.7
sp|P11716|RYR1_RABIT Ryanodine receptor 1 OS=Oryctolagus cunicul... 30 6.7
sp|P22858|PTHR_MOUSE Parathyroid hormone-related protein OS=Mus ... 30 6.7
sp|O88668|CREG1_MOUSE Protein CREG1 OS=Mus musculus GN=Creg1 PE=... 30 6.7
sp|O75629|CREG1_HUMAN Protein CREG1 OS=Homo sapiens GN=CREG1 PE=... 30 6.7
sp|O82368|Y2988_ARATH Uncharacterized protein At2g29880 OS=Arabi... 30 8.7
sp|P26484|FIXC_AZOC5 Protein fixC OS=Azorhizobium caulinodans (s... 30 8.7
sp|Q61462|CY24A_MOUSE Cytochrome b-245 light chain OS=Mus muscul... 30 8.7
sp|Q5JSZ5|BAT2L_HUMAN Protein BAT2-like OS=Homo sapiens GN=BAT2L... 30 8.7

>sp|Q1LZI2|S35F3_MOUSE Solute carrier family 35 member F3 OS=Mus
musculus GN=Slc35f3 PE=2 SV=1
Length = 421

Score = 33.5 bits (75), Expect = 0.79
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3

Query: 180 VLWTAPTNFVWIHLIHFVHRGSLRRTP*RGVIFCSQSSF-FLLPWRVGRNFFLFLR 344
VLWT TN++++H I ++ + V+FC SF FLL W V R+ F+ +R
Sbjct: 159 VLWTL-TNYLYLHAIKKINATDV------SVLFCCNKSFVFLLSWIVLRDRFMGVR 207


>sp|P40317|SOK1_YEAST Protein SOK1 OS=Saccharomyces cerevisiae GN=SOK1
PE=1 SV=2
Length = 901

Score = 32.7 bits (73), Expect = 1.3
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +2

Query: 191 STDKFCVDTSHSLCTPGKLASNPMTGRDFLFSKFFLLVALEGWEELFSVLEAVYRPSWGI 370
+TD V S SL +P K ++ TG F LE +E ++ L A+ W +
Sbjct: 824 TTDTASVKISPSLMSPSKTSTTTPTGNAIASRGLFAATELEEFENVYRHLYALINLHWSV 883

Query: 371 FQVQFWVLLAMDELRKPPI 427
F + +L D++ K I
Sbjct: 884 FGPHYIEMLG-DKVNKKGI 901


>sp|Q8IY50|S35F3_HUMAN Solute carrier family 35 member F3 OS=Homo
sapiens GN=SLC35F3 PE=2 SV=2
Length = 421

Score = 32.3 bits (72), Expect = 1.8
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3

Query: 180 VLWTAPTNFVWIHLIHFVHRGSLRRTP*RGVIFCSQSSF-FLLPWRVGRNFFLFLR 344
VLWT TN++++H I ++ + V+FC +F FLL W V R+ F+ +R
Sbjct: 159 VLWTL-TNYLYLHAIKKINTTDV------SVLFCCNKAFVFLLSWIVLRDRFMGVR 207


>sp|Q62737|CY24A_RAT Cytochrome b-245 light chain OS=Rattus
norvegicus GN=Cyba PE=2 SV=3
Length = 192

Score = 31.6 bits (70), Expect = 3.0
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = -3

Query: 431 LQSVVFLARPLLKEPRTG----PEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKNHAP 264
+ SV++L + E T P++ P + G Q PP PP + ++ + A
Sbjct: 116 IASVIYLLAAIRGEQWTPIEPKPKERPQVGGTIKQPPTNPPPRPPAEVRKKPSEAEEEAA 175

Query: 263 SWGSTQASPVYKVNEM 216
S G Q +P+ +E+
Sbjct: 176 SAGGPQVNPIPVTDEV 191


>sp|Q9NRM1|ENAM_HUMAN Enamelin OS=Homo sapiens GN=ENAM PE=2 SV=3
Length = 1142

Score = 31.2 bits (69), Expect = 3.9
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3

Query: 380 GPEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKNHAPSWGSTQASPVYKVNEMYPH 207
GP+ P + ++ Q K+ P P +E+ + TKN W ++Q V K N PH
Sbjct: 421 GPKPGPVVRNEKIQNPKEKPLGP---KEQIIVPTKNPTSPWRNSQQYEVNKSNYKLPH 475


>sp|P09282|UL32_VZVD Probable major envelope glycoprotein 26
OS=Varicella-zoster virus (strain Dumas) GN=26 PE=3 SV=1
Length = 585

Score = 30.4 bits (67), Expect = 6.7
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -3

Query: 185 KNLYCDRLCSITDRACNVSLLF*KPLLSVTPL--PYCSSLPLDQFFLGQTCIGFLSI 21
K+L+CD LC++++ N +LF P + + Y + L F G+ C G ++
Sbjct: 483 KHLFCDLLCALSELQTNPKILFAHPTTADKEVLELYKAQLAAQNRFEGRVCAGLWTL 539


>sp|Q8BXJ2|TREF1_MOUSE Transcriptional-regulating factor 1 OS=Mus
musculus GN=Trerf1 PE=2 SV=1
Length = 1205

Score = 30.4 bits (67), Expect = 6.7
Identities = 17/80 (21%), Positives = 38/80 (47%)
Frame = -3

Query: 446 GKRGKLQSVVFLARPLLKEPRTGPEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKNHA 267
G +LQ + +P ++ + G ++ ++ Q+ +++ P+PP+QQ++ L+ +
Sbjct: 259 GHMQQLQQHQYYPQPPPQQQQAGLQRISVQEMQQQQQPQQIRPSPPQQQQQLQLQQRQ-- 316

Query: 266 PSWGSTQASPVYKVNEMYPH 207
S Q Y+ M H
Sbjct: 317 ---SSLQIPQYYQPQPMMQH 333


>sp|P11716|RYR1_RABIT Ryanodine receptor 1 OS=Oryctolagus cuniculus
GN=RYR1 PE=1 SV=1
Length = 5037

Score = 30.4 bits (67), Expect = 6.7
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Frame = -3

Query: 449 LGKRGKLQSVVFLARPLLKEPRTGPEKYPTMVGKR-------PQEQKKVPPNPPRQQEE 294
LG G+ + +V P EP PEK G++ P+ KK PP+PP ++EE
Sbjct: 4477 LGVDGEEEELVPEPEP---EPEPEPEKADEENGEKEEVPEAPPEPPKKAPPSPPAKKEE 4532


>sp|P22858|PTHR_MOUSE Parathyroid hormone-related protein OS=Mus
musculus GN=Pthlh PE=2 SV=1
Length = 175

Score = 30.4 bits (67), Expect = 6.7
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -3

Query: 374 EKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKNHAPSWGSTQASPVYKVNEMYPH 207
E Y K P ++KK P R+QE++ RT++ +W ST AS + + + PH
Sbjct: 112 ETYKEQPLKTPGKKKKGKPGKRREQEKKKRRTRS---AWPSTAASGL--LEDPLPH 162


>sp|O88668|CREG1_MOUSE Protein CREG1 OS=Mus musculus GN=Creg1 PE=2
SV=1
Length = 220

Score = 30.4 bits (67), Expect = 6.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3

Query: 332 KKVPPNPPRQQEERTLRTKNHAPSWGS 252
+++PP PPR+ R R H WGS
Sbjct: 44 RRLPPLPPREDGPRVARFVTHVSDWGS 70


tr_hit_id Q6CA95
Definition tr|Q6CA95|Q6CA95_YARLI YALI0D04785p OS=Yarrowia lipolytica
Align length 52
Score (bit) 39.3
E-value 0.16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920916|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_C11.
(580 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6CA95|Q6CA95_YARLI YALI0D04785p OS=Yarrowia lipolytica GN=YA... 39 0.16
tr|B4GM03|B4GM03_DROPE GL12680 OS=Drosophila persimilis GN=GL126... 37 0.79
tr|B0WDW8|B0WDW8_CULQU Putative uncharacterized protein OS=Culex... 37 1.0
tr|A0D119|A0D119_PARTE Chromosome undetermined scaffold_331, who... 37 1.0
tr|Q029V8|Q029V8_SOLUE ATP-dependent DNA helicase, Rep family OS... 35 2.3
tr|Q54WG7|Q54WG7_DICDI Putative uncharacterized protein OS=Dicty... 35 3.0
tr|B4NUH3|B4NUH3_DROSI GD24821 OS=Drosophila simulans GN=GD24821... 35 3.0
tr|B4INB6|B4INB6_DROSE GM16238 OS=Drosophila sechellia GN=GM1623... 35 3.0
tr|Q6ZIR3|Q6ZIR3_ORYSJ Os02g0711900 protein OS=Oryza sativa subs... 34 5.1
tr|B8AHC4|B8AHC4_ORYSI Putative uncharacterized protein OS=Oryza... 34 5.1
tr|A5AW07|A5AW07_VITVI Putative uncharacterized protein OS=Vitis... 34 5.1
tr|A3AAM9|A3AAM9_ORYSJ Putative uncharacterized protein OS=Oryza... 34 5.1
tr|A1CDR9|A1CDR9_ASPCL RING finger domain protein OS=Aspergillus... 34 5.1
tr|Q9SCR7|Q9SCR7_ARATH Proline-rich protein OS=Arabidopsis thali... 34 6.7
tr|Q1PEG5|Q1PEG5_ARATH Proline-rich family protein OS=Arabidopsi... 34 6.7
tr|Q26034|Q26034_PLAFA Variant-specific surface protein OS=Plasm... 34 6.7
tr|B6LW93|B6LW93_BRAFL Putative uncharacterized protein OS=Branc... 34 6.7
tr|A4H6X1|A4H6X1_LEIBR Putative uncharacterized protein OS=Leish... 34 6.7
tr|Q59M77|Q59M77_CANAL Putative uncharacterized protein OS=Candi... 34 6.7
tr|B0RTH9|B0RTH9_XANCB Ribonuclease E OS=Xanthomonas campestris ... 33 8.7

>tr|Q6CA95|Q6CA95_YARLI YALI0D04785p OS=Yarrowia lipolytica
GN=YALI0D04785g PE=3 SV=1
Length = 603

Score = 39.3 bits (90), Expect = 0.16
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = -3

Query: 446 GKRGKLQSVVFLARPLLKEPRTGPEKYPTMVGKRPQEQKKVPPNPPRQQEER 291
G RG+ SV F PL KEP GP+ G+ P PP PP+QQ+++
Sbjct: 414 GSRGRAVSVYF--DPLAKEPAAGPD------GQAPPTHTSAPPPPPQQQQQQ 457


>tr|B4GM03|B4GM03_DROPE GL12680 OS=Drosophila persimilis GN=GL12680
PE=4 SV=1
Length = 1383

Score = 37.0 bits (84), Expect = 0.79
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = -3

Query: 434 KLQSVVFLARPLLKEPRTGPEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKNHAPSWG 255
KLQ++ P + +T P+K+P ++P +Q + P +QQ+++ + + H P
Sbjct: 85 KLQTLKQNTDPSERREQTTPQKHPPQQQQQPTQQLQTQPQLQQQQQQQQQQQQQHLPQQA 144

Query: 254 STQASP 237
S + P
Sbjct: 145 SPMSGP 150


>tr|B0WDW8|B0WDW8_CULQU Putative uncharacterized protein OS=Culex
quinquefasciatus GN=CpipJ_CPIJ005092 PE=4 SV=1
Length = 1128

Score = 36.6 bits (83), Expect = 1.0
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -3

Query: 407 RPLLKEPRTGPEKYPTMVGKRPQEQK--KVPPNPPRQQEERTLRTKNHAPSWGSTQASPV 234
+PLL P T + PT K P+ +K K PP P R+ E + H P + + P
Sbjct: 451 KPLLMPPDTITQFLPT---KSPKSEKGEKAPPKPDRESPEEG--PQQHLPFYPTVDGKPP 505

Query: 233 YKVNEMYPHK 204
KV + PHK
Sbjct: 506 PKVPQEKPHK 515


>tr|A0D119|A0D119_PARTE Chromosome undetermined scaffold_331, whole
genome shotgun sequence. (Fragment) OS=Paramecium
tetraurelia GN=GSPATT00039151001 PE=4 SV=1
Length = 1053

Score = 36.6 bits (83), Expect = 1.0
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -3

Query: 224 NEMYPHKICRCCPKNLYCDRLCSITDRACNVSLLF*KPLLSVTPLPYC-SSLPLDQFFLG 48
N +Y K CP LY D +TDR C S P ++V YC S+ ++ F G
Sbjct: 385 NYLYQQKCSPTCPSQLYTD----LTDRTCKQSC----PSITVIQGQYCKSNCDVNNFLYG 436

Query: 47 QTCI 36
Q C+
Sbjct: 437 QLCV 440


>tr|Q029V8|Q029V8_SOLUE ATP-dependent DNA helicase, Rep family
OS=Solibacter usitatus (strain Ellin6076) GN=Acid_1174
PE=4 SV=1
Length = 788

Score = 35.4 bits (80), Expect = 2.3
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -3

Query: 377 PEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKNHAPSWGS 252
P +YP +G P K+VPP PP ++ R T H P +G+
Sbjct: 711 PPQYPRPIGSAPMPMKQVPPPPPPRKGARAGMTVEH-PKYGT 751


>tr|Q54WG7|Q54WG7_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0205972 PE=4 SV=1
Length = 1377

Score = 35.0 bits (79), Expect = 3.0
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -3

Query: 395 KEPRTGPEKYPTMVGKR--PQEQKKVPPNPPRQQEERTLRTKNHAPSWGSTQASPVYKVN 222
K P T P+K K+ P QK+ PP P++Q+ T K AP+ Q +P
Sbjct: 453 KTPPTTPQKQTPTPQKQTPPTPQKQTPPTTPQKQKAPTTPQKQKAPTTPQKQIAPTTPQK 512

Query: 221 EMYP 210
++ P
Sbjct: 513 QIAP 516


>tr|B4NUH3|B4NUH3_DROSI GD24821 OS=Drosophila simulans GN=GD24821
PE=4 SV=1
Length = 858

Score = 35.0 bits (79), Expect = 3.0
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = -3

Query: 434 KLQSVVFLARPLLKEPRTGPEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKNHAPSWG 255
K++++ FL + + P K V + + + VPPNPP Q N PS
Sbjct: 571 KVRTIAFLWEDYISDSTLPPNKTIWSVERHELKPRHVPPNPPAQS-----NPTNSMPS-- 623

Query: 254 STQASPVYKVNEMYPHKICRCCPKN 180
+ A P Y + YP + P N
Sbjct: 624 NVTAPPTYWIPNNYPMQHANLDPNN 648


>tr|B4INB6|B4INB6_DROSE GM16238 OS=Drosophila sechellia GN=GM16238
PE=4 SV=1
Length = 220

Score = 35.0 bits (79), Expect = 3.0
Identities = 23/87 (26%), Positives = 35/87 (40%)
Frame = -3

Query: 434 KLQSVVFLARPLLKEPRTGPEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKNHAPSWG 255
K++++ F+ + P K V + + + VPPNPP Q N PS
Sbjct: 137 KVRTIAFIWENYRSDSTLPPNKTIWSVERHELKPRHVPPNPPAQS-----NPTNSMPS-- 189

Query: 254 STQASPVYKVNEMYPHKICRCCPKNLY 174
+ A P Y + YP + P N Y
Sbjct: 190 NVTAPPTYWIQNNYPMQHANLHPNNQY 216


>tr|Q6ZIR3|Q6ZIR3_ORYSJ Os02g0711900 protein OS=Oryza sativa subsp.
japonica GN=OJ1038_A06.27 PE=4 SV=1
Length = 249

Score = 34.3 bits (77), Expect = 5.1
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = -3

Query: 386 RTGPEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKN----HAPSWGSTQASPVY 231
R GPE P ++ Q+Q++ PP+QQE+ T + N HAP+ +T A P Y
Sbjct: 135 RFGPEPPPPEQQQQQQQQQQ----PPQQQEQTTQQAPNAGAEHAPARHATSAPPGY 186


>tr|B8AHC4|B8AHC4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_08664 PE=4 SV=1
Length = 249

Score = 34.3 bits (77), Expect = 5.1
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = -3

Query: 386 RTGPEKYPTMVGKRPQEQKKVPPNPPRQQEERTLRTKN----HAPSWGSTQASPVY 231
R GPE P ++ Q+Q++ PP+QQE+ T + N HAP+ +T A P Y
Sbjct: 135 RFGPEPPPPEQQQQQQQQQQ----PPQQQEQTTQQAPNAGAEHAPARHATSAPPGY 186