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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920845
Clone id YMU001_000142_D08
Library
Length 514
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000142_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CACAGAACAGGTAGTTGTAATCCTCTTTGAGACCAAGAAACATGTAGATGGCATCTCCAG
TCACTACACGCATTATCCACATACAATATGTGCACATCTTTGGGTCCATGTTCCCTTCGA
ACCTTGAATCGATCTAGCGGGGGCCGTTTCATCAATTTGCGCCTCATCTTCTGAGGCATT
ACGGACTTGGAAACTCTTCTCCAAAATCCATTGCTTAGGTCCAACCCCCAGACAGCAAAA
ACAGACTGACGTCTCTTTTTTATGAACGTTTTAACGGCTCTTTCTATCTGGCCTCCAGAC
AACACAGCACCGACCACTTTTATTAACGTCATCCATACAGTGACGAGCCACGAAAAAGAA
ACCCTTGCAGCTGCTTGCCATTTTGTAAGGAAAGCACATACCACCCTCATAGCTCACTCT
GGGCACACTGCTTCCTCGAGCCATAATGAGCGAATTGTTTCCTGAATCATCATCATCTGA
AGATGACCCCAGCTCATCTCGAGAGTAGACAAGA
■■Homology search results ■■ -
sp_hit_id Q8NDA8
Definition sp|Q8NDA8|HTR7A_HUMAN HEAT repeat-containing protein 7A OS=Homo sapiens
Align length 79
Score (bit) 34.3
E-value 0.35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920845|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_D08.
         (514 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8NDA8|HTR7A_HUMAN HEAT repeat-containing protein 7A OS=Homo ...    34   0.35 
sp|A4QX49|DBP7_MAGGR ATP-dependent RNA helicase DBP7 OS=Magnapor...    33   1.0  
sp|Q7VF68|SYH_HELHP Histidyl-tRNA synthetase OS=Helicobacter hep...    31   3.8  
sp|P13056|NR2C1_HUMAN Nuclear receptor subfamily 2 group C membe...    31   3.9  
sp|A5E0W5|INO80_LODEL Putative DNA helicase ino80 OS=Lodderomyce...    31   3.9  
sp|Q0C1C5|SYP_HYPNA Prolyl-tRNA synthetase OS=Hyphomonas neptuni...    30   6.5  

>sp|Q8NDA8|HTR7A_HUMAN HEAT repeat-containing protein 7A OS=Homo
            sapiens GN=HEATR7A PE=1 SV=2
          Length = 1641

 Score = 34.3 bits (77), Expect = 0.35
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
 Frame = +2

Query: 35   KKHV-DGISSHYTHYPHTICAHLWVHVPFEP*IDLAGAVSSIC----ASSSEALR-TWKL 196
            +KH+ +G + H+  + +T C HL  H P     DL G + + C     SS E +R    L
Sbjct: 1535 QKHLQEGRALHFGEFLNTTCKHLMHHFP-----DLLGRLLTTCLFYFKSSWENVRAAAPL 1589

Query: 197  FSKIHCLGPTPRQQKQTDV 253
            F+    L   PRQQ Q D+
Sbjct: 1590 FTGFLVLHSEPRQQPQVDL 1608


>sp|A4QX49|DBP7_MAGGR ATP-dependent RNA helicase DBP7 OS=Magnaporthe
           grisea GN=DBP7 PE=3 SV=1
          Length = 825

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 292 PPDNTAPTTFINVIHTVTSHEKETLAAACHFVRKAHTTLIAHSGH 426
           PP  T PT        VT+H + T+  AC+    A+TT+  H  H
Sbjct: 481 PPKETKPTK------PVTNHTESTVGKACYITSAANTTITLHKLH 519


>sp|Q7VF68|SYH_HELHP Histidyl-tRNA synthetase OS=Helicobacter
           hepaticus GN=hisS PE=3 SV=1
          Length = 442

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -3

Query: 332 MTLIKVVGAVLSGGQIERAVKTFIKKRRQSVFAVWGLD 219
           +  +K +G+V SGG+ +   +TF K++   V A  G+D
Sbjct: 294 LNALKSIGSVCSGGRYDNLTRTFSKEKMSGVGASIGID 331


>sp|P13056|NR2C1_HUMAN Nuclear receptor subfamily 2 group C member 1
           OS=Homo sapiens GN=NR2C1 PE=1 SV=1
          Length = 483

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +1

Query: 262 MNVLTALSIWPPDNTAPTTFINVIHTVTSHEKETLAAACHFVRKAHTTL 408
           MNV T L+          TF+N +H     + + +AA  HF R+A T L
Sbjct: 445 MNVATILA----------TFVNCLHNSLQQDAKVIAALIHFTRRAITDL 483


>sp|A5E0W5|INO80_LODEL Putative DNA helicase ino80 OS=Lodderomyces
            elongisporus GN=INO80 PE=3 SV=1
          Length = 1575

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 187  LETLLQNPLLRSNPQTAKTD*RLFFMNVLTALSIWPPDNTAPTTFINV 330
            L+  L NP +RS       +  L FMN  T L ++PP N  P++   V
Sbjct: 1245 LQNELFNPTIRSALAPMSLNKELEFMNNNTPLELYPPSNMLPSSLSKV 1292


>sp|Q0C1C5|SYP_HYPNA Prolyl-tRNA synthetase OS=Hyphomonas neptunium
           (strain ATCC 15444) GN=proS PE=3 SV=1
          Length = 439

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +3

Query: 60  VTTRIIHIQYVHIFGSMFPSNLESI*RGPFHQFAPHLLRHYGLGNS 197
           V+ R I + ++  FG+ +   + ++ +GP  Q  P  +  YG+G S
Sbjct: 275 VSARGIEVGHIFFFGTKYSKPMNAVVQGPDGQMVPVQMGSYGIGVS 320
tr_hit_id Q4DDN1
Definition tr|Q4DDN1|Q4DDN1_TRYCR Dispersed gene family protein 1 (DGF-1), putative OS=Trypanosoma cruzi
Align length 59
Score (bit) 36.2
E-value 0.96
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920845|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_D08.
         (514 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4DDN1|Q4DDN1_TRYCR Dispersed gene family protein 1 (DGF-1), ...    36   0.96 
tr|B1Z221|B1Z221_BURA4 Glycosyltransferase 36 OS=Burkholderia am...    35   2.1  
tr|A7SKF9|A7SKF9_NEMVE Predicted protein (Fragment) OS=Nematoste...    35   2.1  
tr|Q4DTW5|Q4DTW5_TRYCR Dispersed gene family protein 1 (DGF-1), ...    35   2.8  
tr|B7GEI8|B7GEI8_PHATR Predicted protein OS=Phaeodactylum tricor...    35   2.9  
tr|Q12IS0|Q12IS0_SHEDO Diguanylate cyclase/phosphodiesterase wit...    34   3.7  
tr|Q96AG6|Q96AG6_HUMAN KIAA1833 protein (Fragment) OS=Homo sapie...    34   3.7  
tr|A0CN83|A0CN83_PARTE Chromosome undetermined scaffold_22, whol...    33   8.1  

>tr|Q4DDN1|Q4DDN1_TRYCR Dispersed gene family protein 1 (DGF-1),
           putative OS=Trypanosoma cruzi GN=Tc00.1047053507975.40
           PE=4 SV=1
          Length = 3482

 Score = 36.2 bits (82), Expect = 0.96
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -3

Query: 443 WLEEAV--CPE*AMRVVCAFLTKWQAAARVSFSWLVTVWMTLIKVVGAVLSGGQIERAV 273
           W+  AV  CP    RV C  +   +AA  V  + +   WM+ +  V   L GG ++RA+
Sbjct: 21  WMRSAVGTCPRGRHRVRCRVIAAVRAALLVVLALVAAAWMSAVHAVVLRLRGGTVDRAI 79


>tr|B1Z221|B1Z221_BURA4 Glycosyltransferase 36 OS=Burkholderia
            ambifaria (strain MC40-6) GN=BamMC406_3888 PE=4 SV=1
          Length = 2875

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
 Frame = -3

Query: 413  AMRVVCAFLTKWQAAARVSFSWLVTVWMTLIKVVGAVLSGGQIERAVKTFIKKRRQSVFA 234
            A  ++ A L  W    RVSF+W   V +T+       +  G + R  +T +K   +SV  
Sbjct: 820  APAMLVALLAGWMLPLRVSFAWSAFVLVTIALPFLLPVLSGLVPRWRRTHVKMTTRSVLH 879

Query: 233  VWGLDLSNGFWR-RVSKSVMPQK 168
             W  +L     R  +S  ++PQ+
Sbjct: 880  AWSEELQFALTRFGLSVVMLPQQ 902


>tr|A7SKF9|A7SKF9_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g15029 PE=4 SV=1
          Length = 273

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
 Frame = +3

Query: 105 SMFPSNLESI*RGPFHQFAPHLLRHYGLGNSSPKSIA*VQPPDSKNRLTSLFYERFNGSF 284
           SM P++     RGP  Q+       Y  G +S       Q P S+   +   Y R   S 
Sbjct: 178 SMGPTSQYPYSRGPTSQYP------YSRGPTS-------QYPYSRGPTSQYPYSREPTSQ 224

Query: 285 YLASRQHSTDHFY*RHPYSDEPRKRNPCSCLPFCKEST-YHPHS 413
           Y  SR+ ++ + Y R P S  P  R P S  P+ +E T  +P+S
Sbjct: 225 YPYSREPTSQYPYSRGPTSQYPYSRGPTSQYPYSREPTSQYPYS 268


>tr|Q4DTW5|Q4DTW5_TRYCR Dispersed gene family protein 1 (DGF-1),
           putative OS=Trypanosoma cruzi GN=Tc00.1047053506973.70
           PE=4 SV=1
          Length = 3447

 Score = 34.7 bits (78), Expect = 2.8
 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
 Frame = -3

Query: 461 ETIRSLWLEEAV--CPE*AMRVVCAFLTKWQAAARVSFSWLVTVWMTLIKVVGAVLSGGQ 288
           +T    W++ AV  CP    RV C  +   + A  V    +   WM  +  V   L GG 
Sbjct: 15  DTCLGRWMQSAVGACPRSRHRVRCRAIAAVRVALLVVLVLVAAAWMPAVHAVVLRLRGGT 74

Query: 287 IERAVKTFIKKRRQSVFAVWGLDLSNG 207
           ++RA+      R      + G+ ++NG
Sbjct: 75  VDRAITV---GRAVDTVLMDGVSITNG 98


>tr|B7GEI8|B7GEI8_PHATR Predicted protein OS=Phaeodactylum
           tricornutum CCAP 1055/1 GN=PHATRDRAFT_41555 PE=4 SV=1
          Length = 350

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -2

Query: 219 PKQWILEKSFQVRNASEDEAQIDETAPARSIQGSKGTWTQRC 94
           P  W L ++  + +  +D+ + D+T+ + +IQG K  W Q C
Sbjct: 15  PTNWALVEADSMNSVLQDDNKDDDTSASENIQGFKSEWRQSC 56


>tr|Q12IS0|Q12IS0_SHEDO Diguanylate cyclase/phosphodiesterase with
            PAS/PAC sensor(S) OS=Shewanella denitrificans (strain
            OS217 / ATCC BAA-1090 / DSM 15013) GN=Sden_3380 PE=3 SV=1
          Length = 1479

 Score = 34.3 bits (77), Expect = 3.7
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 211  LLRSNPQTAKTD*RLFFMNVLTALSIWPPDNTAPTTFINVIHTVTSHEKE 360
            LL++  Q  K + R FF++    +S+WP D+  P T I        H KE
Sbjct: 1155 LLKTIEQPFKLEGREFFISTSIGISVWPDDSIDPETLIKNADLAMYHAKE 1204


>tr|Q96AG6|Q96AG6_HUMAN KIAA1833 protein (Fragment) OS=Homo sapiens
           GN=KIAA1833 PE=2 SV=1
          Length = 509

 Score = 34.3 bits (77), Expect = 3.7
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
 Frame = +2

Query: 35  KKHV-DGISSHYTHYPHTICAHLWVHVPFEP*IDLAGAVSSIC----ASSSEALR-TWKL 196
           +KH+ +G + H+  + +T C HL  H P     DL G + + C     SS E +R    L
Sbjct: 419 QKHLQEGRALHFGEFLNTTCKHLMHHFP-----DLLGRLLTTCLFYFKSSWENVRAAAPL 473

Query: 197 FSKIHCLGPTPRQQKQTDV 253
           F+    L   PRQQ Q D+
Sbjct: 474 FTGFLVLHSEPRQQPQVDL 492


>tr|A0CN83|A0CN83_PARTE Chromosome undetermined scaffold_22, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00008691001 PE=4 SV=1
          Length = 857

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = +3

Query: 141 GPFHQFAPHLLRHYGLGNSSPKSIA*VQPPDSKNRLTSLFYERFNGSFYLAS 296
           GPF+QF  + + HY   +SS +S+   Q PD    L SL  E +N S  L S
Sbjct: 18  GPFNQFELNNIDHYIKRDSSNESVL-PQEPDKIGNLNSLQIESYNSSRQLES 68