BP920823
Clone id YMU001_000142_B09
Library
Length 371
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000142_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCAGGTACTCCTGGAAGGTGGAGCAGTACAGCAGTAAGTGGCATCAATCGTCTTTGTGTA
CCATCAAGAGTCCCATGGCATCATCAGGTAGTTGACGACCTAGGAGTGCCATTGACTTCC
TTTTATGTAGCAATGTACAAGTCAACAGTGGATATTGGGTGACGATGGAGTTCAAACAAA
TTATGTGGGTGACAATGCAGCCCAGCTCAAGAGGTGGACATAAGGTCTCAAGGAGACACA
TGTCTTCTCGAGCACACCATTGGAAGGGAAGAATCATGGAGTTCAAGAAAACACATGATG
GCAAGAGGCTTGCAAAGGTACAACATGTGTATGTTGCTTCACAAATGAAGCTAGAGACAA
CAGTGGCTCCA
■■Homology search results ■■ -
sp_hit_id Q6PAR5
Definition sp|Q6PAR5|GAPD1_MOUSE GTPase-activating protein and VPS9 domain-containing protein 1 OS=Mus musculus
Align length 89
Score (bit) 32.0
E-value 0.98
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920823|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_B09.
(371 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6PAR5|GAPD1_MOUSE GTPase-activating protein and VPS9 domain-... 32 0.98
sp|Q5ZID5|UBP28_CHICK Ubiquitin carboxyl-terminal hydrolase 28 O... 30 3.7
sp|Q96M60|CO033_HUMAN Uncharacterized protein C15orf33 OS=Homo s... 30 4.9
sp|Q8A9J0|UXAB_BACTN Altronate oxidoreductase OS=Bacteroides the... 29 8.3

>sp|Q6PAR5|GAPD1_MOUSE GTPase-activating protein and VPS9
domain-containing protein 1 OS=Mus musculus GN=Gapvd1
PE=1 SV=2
Length = 1458

Score = 32.0 bits (71), Expect = 0.98
Identities = 20/89 (22%), Positives = 39/89 (43%)
Frame = +3

Query: 63 IKSPMASSGS*RPRSAIDFLLCSNVQVNSGYWVTMEFKQIMWVTMQPSSRGGHKVSRRHM 242
+KS M+ R A+D LL + Q G +++ M P++ +K +R +
Sbjct: 421 MKSVMSGDQLKEDRMALDNLLANLPQAKPGKSSSLDMTPYSTPQMSPATTPANKKNRLPI 480

Query: 243 SSRAHHWKGRIMEFKKTHDGKRLAKVQHV 329
++R+ +M+ H+G +Q V
Sbjct: 481 ATRSRSRSNMLMDLHMDHEGSSQETIQEV 509


>sp|Q5ZID5|UBP28_CHICK Ubiquitin carboxyl-terminal hydrolase 28
OS=Gallus gallus GN=USP28 PE=2 SV=1
Length = 1047

Score = 30.0 bits (66), Expect = 3.7
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3

Query: 9 SWKVEQYSSKWHQSSLCTIKSPMASSGS*RPRSAID 116
+W++EQ + +W + C I S + S P S +D
Sbjct: 688 NWRLEQEAEEWEEEQSCKIPSTASESQELSPESGLD 723


>sp|Q96M60|CO033_HUMAN Uncharacterized protein C15orf33 OS=Homo
sapiens GN=C15orf33 PE=2 SV=2
Length = 508

Score = 29.6 bits (65), Expect = 4.9
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +3

Query: 117 FLLCSNVQVNSGYWVTMEFKQIMWVTMQPSSRGGHKVSRRHMSSRAHH 260
FL CS ++ G+W+ + K++ T+ S + K + ++ H
Sbjct: 287 FLWCSGLKPQKGFWIHWKLKELSTTTIHGSKKAPAKSVKERIADSQEH 334


>sp|Q8A9J0|UXAB_BACTN Altronate oxidoreductase OS=Bacteroides
thetaiotaomicron GN=uxaB PE=3 SV=1
Length = 479

Score = 28.9 bits (63), Expect = 8.3
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1

Query: 37 SGINRLCVPSRVPWHHQVVDDLGVPLTSFYVAMYKSTVDI 156
+G+N L VPS P+H + V L P T Y S V+I
Sbjct: 263 AGLNVLFVPSEAPYHERKVTLLNGPHTVLSPVAYLSGVNI 302


tr_hit_id B5MGQ7
Definition tr|B5MGQ7|B5MGQ7_CARAU Alkaline phosphatase OS=Carassius auratus
Align length 69
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920823|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_B09.
(371 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B5MGQ7|B5MGQ7_CARAU Alkaline phosphatase OS=Carassius auratus... 36 1.1
tr|Q1MGV9|Q1MGV9_RHIL3 Putative flavodoxin monooxygenase OS=Rhiz... 33 7.1
tr|B7XKX3|B7XKX3_9MICR HrpE OS=Enterocytozoon bieneusi H348 GN=E... 33 9.2

>tr|B5MGQ7|B5MGQ7_CARAU Alkaline phosphatase OS=Carassius auratus
GN=ALP PE=2 SV=1
Length = 526

Score = 35.8 bits (81), Expect = 1.1
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = +2

Query: 164 DGVQTNYVGDNAAQLKRWT*GLKETHVFSSTPLEGKNHGVQENT*WQEACKGTTCVCCFT 343
D Q NY+ +A L T G ++ +FS P+ HGVQE C+
Sbjct: 437 DYAQNNYLAQSAVPLSMETHGGEDVAIFSKGPMAHLLHGVQEQHYIPHVMAYAACIGQNK 496

Query: 344 NEARDNSGS 370
+ R NSGS
Sbjct: 497 DHCRANSGS 505


>tr|Q1MGV9|Q1MGV9_RHIL3 Putative flavodoxin monooxygenase
OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=RL2319 PE=4 SV=1
Length = 498

Score = 33.1 bits (74), Expect = 7.1
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Frame = +1

Query: 211 EVDIRSQGDTCLLEHTIGREE------SWSSRKHMMARGLQRYNM 327
EVD+ + G T L+E GR++ SW+S HM AR RY +
Sbjct: 239 EVDLSAAGLTALVEERTGRDDIEVQSVSWASAFHMNARLADRYRL 283


>tr|B7XKX3|B7XKX3_9MICR HrpE OS=Enterocytozoon bieneusi H348
GN=EBI_22264 PE=4 SV=1
Length = 198

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1

Query: 220 IRSQGDTCLLEHTIGREESWSSRKHMMARGLQRYNMCMLLH 342
I +Q CLL+ T+ ++ + KH+MA +Q N +L H
Sbjct: 94 ITNQAIRCLLDETVAQQRLGALLKHLMANQIQEVNATLLCH 134