BP920656
Clone id YMU001_000139_H01
Library
Length 499
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_H01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAAGATAAGATGGGAAACCCCAGCTGTGATAGTGGCTGGGCTGCCTGCCTGTGATGCTTC
TGTGGGTTCATTGAGAGGGGTACTTTTCGTAGCCTTCTGTGTCTCGGATGAAACAATACC
ATGATGCTGTTGATTCATAGAGACCTCCATATTGCCGAATAGAGGGCCCTCTGTTTCATT
TTGCATAGCCTCATGCAATCTGGTTGCTCTTGAGCCCTCCTCAAGCATGGACTTCTGTAC
AGGAGCAGTTTCGCACATCTTTGCAGTAGGGCACGTTAAACCAATGCCCTCCATCCCATG
CATGGAAACTTTCTTTGTGCTTATCTGTGCAGCCTTCTCACGGCTTGAAATTTCAACTCC
AGCCAGAGAAACCTGATGTAACTTGTTCTCTCCAACAAGTTCACTACATGTATTCATGAC
CTCGATCTTCTGAAAAGACTTTTCATTTGTGCTTGCATGGGCTTCTTTAGGGCTAGTAGC
ATGCAGAGAGGGGTGTAAC
■■Homology search results ■■ -
sp_hit_id O09000
Definition sp|O09000|NCOA3_MOUSE Nuclear receptor coactivator 3 OS=Mus musculus
Align length 168
Score (bit) 33.1
E-value 0.74
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920656|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_H01.
(499 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O09000|NCOA3_MOUSE Nuclear receptor coactivator 3 OS=Mus musc... 33 0.74
sp|Q503W7|ATD1B_DANRE ATPase family AAA domain-containing protei... 33 0.74
sp|A4XJ42|SECA_CALS8 Protein translocase subunit secA OS=Caldice... 31 2.8
sp|P33174|KIF4_MOUSE Chromosome-associated kinesin KIF4 OS=Mus m... 31 2.8
sp|O74880|MCES_SCHPO mRNA cap guanine-N7 methyltransferase OS=Sc... 31 3.7
sp|P16143|PO2F1_XENLA POU domain, class 2, transcription factor ... 30 6.3
sp|P97874|GAK_RAT Cyclin G-associated kinase OS=Rattus norvegicu... 30 8.2

>sp|O09000|NCOA3_MOUSE Nuclear receptor coactivator 3 OS=Mus
musculus GN=Ncoa3 PE=1 SV=2
Length = 1398

Score = 33.1 bits (74), Expect = 0.74
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 8/168 (4%)
Frame = -2

Query: 492 PSLHATSPKEAHASTNEKSFQK--IEVMNTCSELVGENKLHQVSLAGVEISSREKAAQIS 319
P+ A SP +T SF + + SE VG + L +S G ++ +
Sbjct: 492 PAAGAHSPMGPSGNTGSHSFSSSSLSALQAISEGVGTSLLSTLSSPGPKLDNSPNMNISQ 551

Query: 318 TKKVSMHGMEGIGLTCPTAKMCETAPVQKSMLEEGSRATRL----HEAMQNETEGPLFGN 151
KVS G P CE PV+ S+ + SR ++ E+ +E P G
Sbjct: 552 PSKVS-----GQDSKSPLGLYCEQNPVESSVCQSNSRDPQVKKESKESSGEVSETPR-GP 605

Query: 150 MEVSMNQQHHGIVSSETQKATKSTPLNEPTEASQAGSPATIT--AGVS 13
+E +++ +++ + S+ N P + + S ++T +GVS
Sbjct: 606 LESKGHKKLLQLLTCSSDDRGHSSLTNSPLDPNCKDSSVSVTSPSGVS 653


>sp|Q503W7|ATD1B_DANRE ATPase family AAA domain-containing protein
1-B OS=Danio rerio GN=atad1b PE=2 SV=2
Length = 362

Score = 33.1 bits (74), Expect = 0.74
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = -2

Query: 432 QKIEVMNTCSELVGENKLHQVSLAGVEISSREKAAQISTKKVSMHGMEGIGLTCPTAKMC 253
QK+E +L+ + + V L+ E+S T +++ H + G+ K
Sbjct: 51 QKVEAQKQAEKLMRQIGVQNVKLSEYEMSIAAHLVDPLTMQITWHDIAGLDEVITELKDT 110

Query: 252 ETAPVQKSMLEEGSR 208
P+QK L EGSR
Sbjct: 111 VILPIQKRHLFEGSR 125


>sp|A4XJ42|SECA_CALS8 Protein translocase subunit secA
OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=secA PE=3 SV=1
Length = 848

Score = 31.2 bits (69), Expect = 2.8
Identities = 30/125 (24%), Positives = 56/125 (44%)
Frame = -2

Query: 465 EAHASTNEKSFQKIEVMNTCSELVGENKLHQVSLAGVEISSREKAAQISTKKVSMHGMEG 286
EA A+ E +++ +++ + +L+G LHQ +A E+ + E ++T ++ +EG
Sbjct: 65 EAFAAVREAAWRTLKMRHFRVQLIGGIVLHQGRIA--EMKTGEGKTLVATLPAYLNALEG 122

Query: 285 IGLTCPTAKMCETAPVQKSMLEEGSRATRLHEAMQNETEGPLFGNMEVSMNQQHHGIVSS 106
G+ T A R E M GP++ + +S+ HG+ S
Sbjct: 123 KGVHIVTVN--------------DYLAKRDAEWM-----GPIYNFLGLSVGVIVHGLTSE 163

Query: 105 ETQKA 91
E +KA
Sbjct: 164 ERRKA 168


>sp|P33174|KIF4_MOUSE Chromosome-associated kinesin KIF4 OS=Mus
musculus GN=Kif4 PE=2 SV=2
Length = 1231

Score = 31.2 bits (69), Expect = 2.8
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 14/103 (13%)
Frame = -2

Query: 348 SSREKAAQISTKKVSMHGMEGIGLTCPTAKMCETAPVQKSMLEEGSRATRLHEAMQNETE 169
SSREKA QI+ ++ G++ +GL T K A S LE+G+ + + N
Sbjct: 154 SSREKATQINIREDPKEGIKIVGL---TEKTVLVASDTVSCLEQGNNSRTVASTAMNSQS 210

Query: 168 GPLFGNMEVSMNQQHHG--------------IVSSETQKATKS 82
+S+ Q+ + SE QK TK+
Sbjct: 211 SRSHAIFTISIEQRKKNDKNSSFRSKLHLVDLAGSERQKKTKA 253


>sp|O74880|MCES_SCHPO mRNA cap guanine-N7 methyltransferase
OS=Schizosaccharomyces pombe GN=pcm1 PE=1 SV=1
Length = 389

Score = 30.8 bits (68), Expect = 3.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2

Query: 198 LHEAMQNETEGPLFGNMEVSMNQQHHGIVSSETQKA 91
L+E +ET GPL M+V N+ H GI E + A
Sbjct: 341 LNEEKNSETYGPLMDRMKVVDNEGHRGIGGQEKEAA 376


>sp|P16143|PO2F1_XENLA POU domain, class 2, transcription factor 1
OS=Xenopus laevis GN=pou2f1 PE=2 SV=2
Length = 760

Score = 30.0 bits (66), Expect = 6.3
Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 19/168 (11%)
Frame = -2

Query: 495 HPSLHATSPKEAHAST----NEKSFQK----IEVMNTCSELVGENKLHQVSLAGVEISSR 340
+PS + SP+ +T N FQK I + + LHQV LAG + +
Sbjct: 22 NPSETSKSPESGDGNTGTQTNGLDFQKQAVPIGAITSAQAQALLGHLHQVQLAGTSLQAA 81

Query: 339 EKAAQISTKKVSMHGMEGIGLTCPTAK-MCETAPVQKSMLEEGSRATRL-------HEAM 184
+ + TK G E + + P+ + + A Q ++ G + L +
Sbjct: 82 AHSLNVQTKFKEEPG-EPMQVVQPSQQPSLQAAIPQTQLMVAGGQIAGLTLTPAQQQMLL 140

Query: 183 QNETEGPLFGNMEVSMNQQHH---GIVSSETQKATKSTPLNEPTEASQ 49
Q L ++ S NQQH+ +S+ PL++P + +Q
Sbjct: 141 QQAQAQLLAAAVQHSANQQHNAAGATISASAATPMTQIPLSQPIQIAQ 188


>sp|P97874|GAK_RAT Cyclin G-associated kinase OS=Rattus norvegicus
GN=Gak PE=2 SV=1
Length = 1305

Score = 29.6 bits (65), Expect = 8.2
Identities = 33/126 (26%), Positives = 48/126 (38%), Gaps = 7/126 (5%)
Frame = -2

Query: 360 GVEISSREKAAQISTKKVSMHGMEGIGLTCPTAKM-------CETAPVQKSMLEEGSRAT 202
G E+S E+A+ S ++ G + L T + AP + EEG
Sbjct: 823 GSEVSDEEEASCPSEERKPGAGEDTPRLAAGTRQQDLIFDVGMLAAPQEPVQPEEGVDLL 882

Query: 201 RLHEAMQNETEGPLFGNMEVSMNQQHHGIVSSETQKATKSTPLNEPTEASQAGSPATITA 22
LH PL Q G+ SS T + L EP++ASQ G P +
Sbjct: 883 GLHSEGDLRPAAPL----------QASGVQSSNTDLLSS---LLEPSDASQVGPPGDLLG 929

Query: 21 GVSHLI 4
G + L+
Sbjct: 930 GETPLL 935


tr_hit_id B4LCS3
Definition tr|B4LCS3|B4LCS3_DROVI GJ11255 OS=Drosophila virilis
Align length 156
Score (bit) 38.1
E-value 0.23
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920656|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_H01.
(499 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4LCS3|B4LCS3_DROVI GJ11255 OS=Drosophila virilis GN=GJ11255 ... 38 0.23
tr|A8SAH7|A8SAH7_9FIRM Putative uncharacterized protein OS=Faeca... 37 0.67
tr|Q2CD42|Q2CD42_9RHOB OmpA domain protein OS=Oceanicola granulo... 35 1.5
tr|Q980X3|Q980X3_SULSO Putative uncharacterized protein OS=Sulfo... 35 1.5
tr|Q4V8Z4|Q4V8Z4_DANRE Zgc:114075 OS=Danio rerio GN=zgc:114075 P... 35 2.6
tr|B3PRS9|B3PRS9_RHIE6 Hypothetical conserved protein OS=Rhizobi... 35 2.6
tr|B2A8V7|B2A8V7_PODAN Predicted CDS Pa_1_7530 OS=Podospora anse... 35 2.6
tr|Q1PUR2|Q1PUR2_9BACT Putative uncharacterized protein OS=Candi... 34 3.3
tr|B8NX99|B8NX99_ASPFL Putative uncharacterized protein OS=Asper... 34 3.3
tr|A3LTL7|A3LTL7_PICST Hyphally-regulated cell wall protein OS=P... 34 3.3
tr|A6VIA2|A6VIA2_METM7 Putative uncharacterized protein OS=Metha... 34 4.4
tr|A2CCX8|A2CCX8_PROM3 Transketolase OS=Prochlorococcus marinus ... 33 5.7
tr|Q3UQL7|Q3UQL7_MOUSE Putative uncharacterized protein OS=Mus m... 33 9.7
tr|Q05BA5|Q05BA5_MOUSE Nuclear receptor coactivator 3 OS=Mus mus... 33 9.7
tr|B2RUJ1|B2RUJ1_MOUSE Ncoa3 protein OS=Mus musculus GN=Ncoa3 PE... 33 9.7
tr|A5D6Q2|A5D6Q2_MOUSE Ncoa3 protein (Fragment) OS=Mus musculus ... 33 9.7
tr|A2A468|A2A468_MOUSE Nuclear receptor coactivator 3 OS=Mus mus... 33 9.7
tr|Q7V4J4|Q7V4J4_PROMM Transketolase OS=Prochlorococcus marinus ... 33 9.7
tr|B0UN17|B0UN17_METS4 UspA domain protein OS=Methylobacterium s... 33 9.7
tr|B6GV97|B6GV97_STRSL Surface immunogenic protein OS=Streptococ... 33 9.7
tr|B4LR57|B4LR57_DROVI GJ15404 OS=Drosophila virilis GN=GJ15404 ... 33 9.7
tr|B4G8S4|B4G8S4_DROPE GL19343 OS=Drosophila persimilis GN=GL193... 33 9.7
tr|B3LC94|B3LC94_PLAKH Putative uncharacterized protein OS=Plasm... 33 9.7
tr|Q1E9Q1|Q1E9Q1_COCIM Putative uncharacterized protein OS=Cocci... 33 9.7
tr|Q0UY90|Q0UY90_PHANO Putative uncharacterized protein OS=Phaeo... 33 9.7
tr|A8PXP0|A8PXP0_MALGO Putative uncharacterized protein OS=Malas... 33 9.7
tr|O93672|O93672_9CREN Putative uncharacterized protein OS=Sulfo... 33 9.7

>tr|B4LCS3|B4LCS3_DROVI GJ11255 OS=Drosophila virilis GN=GJ11255
PE=4 SV=1
Length = 1782

Score = 38.1 bits (87), Expect = 0.23
Identities = 32/156 (20%), Positives = 66/156 (42%)
Frame = -2

Query: 480 ATSPKEAHASTNEKSFQKIEVMNTCSELVGENKLHQVSLAGVEISSREKAAQISTKKVSM 301
++S +++ ++ E E ++ SE +++ + S + E SS A S+
Sbjct: 518 SSSSEDSSSAVTEPLESSTESFSSSSEAPSSSEVTEPSDSSTESSSSSSEASSSS----- 572

Query: 300 HGMEGIGLTCPTAKMCETAPVQKSMLEEGSRATRLHEAMQNETEGPLFGNMEVSMNQQHH 121
+T T E++ S + S ++ + + ++ TEG + E S +
Sbjct: 573 ------AVTDQTESSTESSVESSSPSSQASSSSEVTDPSESSTEGSSSSSQEPSESSTES 626

Query: 120 GIVSSETQKATKSTPLNEPTEASQAGSPATITAGVS 13
SSE + + P TE+S + S AT ++ V+
Sbjct: 627 SSSSSEVSSSEITEPSESSTESSSSSSEATSSSEVT 662


>tr|A8SAH7|A8SAH7_9FIRM Putative uncharacterized protein
OS=Faecalibacterium prausnitzii M21/2
GN=FAEPRAM212_01374 PE=3 SV=1
Length = 291

Score = 36.6 bits (83), Expect = 0.67
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = -2

Query: 495 HPSLHATSPKEAHASTNEK----SFQKIEVMNTCSELVGENKLHQVSLAGVEISSREKAA 328
+P LH +AHA + V+ C ELVG+ ++HQ + + + E AA
Sbjct: 122 YPDLHIVH-FDAHADLRDDYLGAKLSHACVLRRCHELVGDGRIHQFCIRSGDRAEFEFAA 180

Query: 327 QISTKKVSMHGMEGIGLTCPTAKMCET 247
Q MH + GL TA++CE+
Sbjct: 181 Q----HTEMHKFDFTGLAELTAQLCES 203


>tr|Q2CD42|Q2CD42_9RHOB OmpA domain protein OS=Oceanicola granulosus
HTCC2516 GN=OG2516_12331 PE=3 SV=1
Length = 298

Score = 35.4 bits (80), Expect = 1.5
Identities = 25/69 (36%), Positives = 34/69 (49%)
Frame = -2

Query: 375 QVSLAGVEISSREKAAQISTKKVSMHGMEGIGLTCPTAKMCETAPVQKSMLEEGSRATRL 196
Q SLAG SR +A Q+ T+ ++ HG + LT APV ++ EG A R
Sbjct: 232 QGSLAGNISLSRRRADQVRTRLIAEHGTDPAQLTADGVGY--LAPVASNLTPEGREANRR 289

Query: 195 HEAMQNETE 169
EA+ TE
Sbjct: 290 VEAVLVSTE 298


>tr|Q980X3|Q980X3_SULSO Putative uncharacterized protein
OS=Sulfolobus solfataricus GN=SSO0152 PE=4 SV=1
Length = 600

Score = 35.4 bits (80), Expect = 1.5
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -2

Query: 450 TNEKSFQKIEVMNTCSELV--GENKLHQVSLAGVEISSREKAAQISTKKVSMHGMEGIGL 277
+NEK+ +K+E+M T + GEN + I+SR+K + +ST + G+EG+G+
Sbjct: 147 SNEKAKRKLELMETIISRIESGENPFRYEMY--IIINSRDKNSALSTASMIRQGLEGLGI 204

Query: 276 TCPTAKMCE 250
A + E
Sbjct: 205 KTRLATLHE 213


>tr|Q4V8Z4|Q4V8Z4_DANRE Zgc:114075 OS=Danio rerio GN=zgc:114075 PE=2
SV=1
Length = 524

Score = 34.7 bits (78), Expect = 2.6
Identities = 31/112 (27%), Positives = 50/112 (44%)
Frame = -2

Query: 492 PSLHATSPKEAHASTNEKSFQKIEVMNTCSELVGENKLHQVSLAGVEISSREKAAQISTK 313
P+ ++P E + E S+ + +V +T + L + +L + A VE++ T
Sbjct: 46 PTTPTSAPDEGDIFSEEGSYIRSDVHHTTNGLHSDEELDLFTEATVELTL--------TN 97

Query: 312 KVSMHGMEGIGLTCPTAKMCETAPVQKSMLEEGSRATRLHEAMQNETEGPLF 157
S E IG PTA C T V S+L+ S T+ E ++ E G F
Sbjct: 98 TTSQGRREIIG---PTASACNTTHVPNSILKP-SIVTKTMEELEEEESGDQF 145


>tr|B3PRS9|B3PRS9_RHIE6 Hypothetical conserved protein OS=Rhizobium
etli (strain CIAT 652) GN=RHECIAT_CH0002687 PE=4 SV=1
Length = 305

Score = 34.7 bits (78), Expect = 2.6
Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 3/158 (1%)
Frame = -2

Query: 495 HPSLHATSPKEAHASTNEKSFQKIEVMNTCSELVGENKLHQVSLAGVEISSREKAAQIST 316
H ++ P+ A S ++ + E+ N + + L +LA ++S K +S
Sbjct: 148 HALMNTADPRMAAISAFATAYAQYELANGAAPPADDPALGDAALAAA-LASATKTGTVSP 206

Query: 315 KKVSM-HGMEGIGLTCPTA-KMCETAPVQKSMLEEGSRATRLHEAMQNETEGPLFGNMEV 142
+ +S G+G T +M ET Q E + AT + + EG + V
Sbjct: 207 EALSWAKDTLGVGTAVGTIDQMRETMAAQAPAAETPADATETETS--DTAEGSDTTDPAV 264

Query: 141 SMNQQHHGIVSSE-TQKATKSTPLNEPTEASQAGSPAT 31
+ G SSE T+STP +PTE S S T
Sbjct: 265 TAETPEAGTGSSEEVSGTTESTPAIDPTETSAPTSTET 302


>tr|B2A8V7|B2A8V7_PODAN Predicted CDS Pa_1_7530 OS=Podospora anserina
PE=4 SV=1
Length = 7657

Score = 34.7 bits (78), Expect = 2.6
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = -2

Query: 471 PKEAHASTNEKSFQKIEVMNTCSELVGENKLHQVSLAGVEISSREKAAQISTKKVS 304
P++ H E SFQ ++ + T + + +LH++ LA I +R ++ + + +S
Sbjct: 4517 PQQPHLQQQENSFQALQPIPTAASPIDATQLHELRLASSPIGARPRSVSFTLEAIS 4572


>tr|Q1PUR2|Q1PUR2_9BACT Putative uncharacterized protein
OS=Candidatus Kuenenia stuttgartiensis GN=kustb0226 PE=4
SV=1
Length = 759

Score = 34.3 bits (77), Expect = 3.3
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = -2

Query: 393 GENKLHQVSLAGVEISSREKAAQISTKKVSMHGMEGIGLTCPTA---KMCETAPVQKSML 223
G+ + V+ + V + SRE QIST + ++GI A K T+P+ K L
Sbjct: 61 GDEEFLVVAFSAVNLFSREYMQQISTLAGKIKNLDGIVTVASLADVFKSKVTSPLFKEKL 120

Query: 222 EEGSRATRLHEAMQNETEGPLFGNMEVSMNQQHHGIVSS 106
+ R + ++ Q P++ N +S N + IV++
Sbjct: 121 KTYGRRSVMNVFKQEVRTDPVYQNTIISKNGRTTAIVAT 159


>tr|B8NX99|B8NX99_ASPFL Putative uncharacterized protein
OS=Aspergillus flavus NRRL3357 GN=AFLA_115850 PE=4 SV=1
Length = 790

Score = 34.3 bits (77), Expect = 3.3
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1

Query: 157 RQYGGLYESTASWYC--FIRDTEGYEKYPSQ*THRSITGRQPSHYHSWGF 14
R+ G + ST SWY +R +GY + P + + P+H+H W F
Sbjct: 23 RKRHGTWASTKSWYSRTVLRSGKGYNRLP-------VKAQDPTHFHGWRF 65


>tr|A3LTL7|A3LTL7_PICST Hyphally-regulated cell wall protein
OS=Pichia stipitis GN=HYR10 PE=4 SV=1
Length = 980

Score = 34.3 bits (77), Expect = 3.3
Identities = 28/139 (20%), Positives = 55/139 (39%)
Frame = -2

Query: 456 ASTNEKSFQKIEVMNTCSELVGENKLHQVSLAGVEISSREKAAQISTKKVSMHGMEGIGL 277
+S+ S ++I + SE ++ + E SS E +++ S++ S +
Sbjct: 416 SSSETSSSEEISSTESSSETSSSEEISSTESSS-ETSSSESSSETSSETSSSEEVSSTEE 474

Query: 276 TCPTAKMCETAPVQKSMLEEGSRATRLHEAMQNETEGPLFGNMEVSMNQQHHGIVSSETQ 97
T ET+ ++ E S T E E+ + E+S + SSE
Sbjct: 475 VSSTESSSETSSSEEVSSTESSSETSSEEVSSTESSSETSSSEEISSTESSSETSSSEEV 534

Query: 96 KATKSTPLNEPTEASQAGS 40
+T+S+ +E + + S
Sbjct: 535 SSTESSSETSSSEETSSNS 553