BP920653
Clone id YMU001_000139_G09
Library
Length 481
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_G09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTTTTTTAAAGATGAGACAATTTATTGCTGCAAACTTACAATTCCTAAACA
GATGTTTATGAGGACAACATAAGCATAACCGGATCTAAATCTCTACAACACATTTACAAG
TAGAAGCCCTAACCGGACCTAGATCTCTACAACACATTTACAAGTAGAAGCCCTCAAAGC
TTCTTTATTCTGACCTTGCTTTTCCCTTAATGGAGATTGCATCGACAGATTATCATGTCA
AAAATTCTCTACGAGAAATTTGTTTGATTCAGAAAAGGAATTCCATAGCTTCCATCAAAG
AATTATGTGGCTAAGCCTTGAACTGTATCTTTCAATTCCACCAAAAAGCTTTGAGTCTCC
GAGAGCAACTTTGTTACAGCAGCCTTGTTTTGCTGCACATTGTCGAGAGCTTCTGCTACA
ACAGGTAGCCAGTCTTCTTCTGCCTGAGGAAACCTTTCCTTCAGTGCTTGCTTCCTGCAA
C
■■Homology search results ■■ -
sp_hit_id Q6DE92
Definition sp|Q6DE92|PXDC2_XENLA Plexin domain-containing protein 2 OS=Xenopus laevis
Align length 79
Score (bit) 34.3
E-value 0.27
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920653|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_G09.
(465 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6DE92|PXDC2_XENLA Plexin domain-containing protein 2 OS=Xeno... 34 0.27
sp|Q9D0M2|CDCA7_MOUSE Cell division cycle-associated protein 7 O... 32 1.0
sp|Q5K2P4|K1C13_PROAT Keratin, type I cytoskeletal 13 OS=Protopt... 32 1.8
sp|Q4KM91|CDCA7_RAT Cell division cycle-associated protein 7 OS=... 32 1.8
sp|Q4R5E9|SCG2_MACFA Secretogranin-2 OS=Macaca fascicularis GN=S... 31 2.3
sp|P58994|GSH1_BUCAP Glutamate--cysteine ligase OS=Buchnera aphi... 31 3.1
sp|Q9UJ42|GP160_HUMAN Probable G-protein coupled receptor 160 OS... 30 6.8
sp|Q9R1Y5|HIC1_MOUSE Hypermethylated in cancer 1 protein OS=Mus ... 29 8.7
sp|Q14526|HIC1_HUMAN Hypermethylated in cancer 1 protein OS=Homo... 29 8.7
sp|A1ATJ6|DNLJ_PELPD DNA ligase OS=Pelobacter propionicus (strai... 29 8.7

>sp|Q6DE92|PXDC2_XENLA Plexin domain-containing protein 2 OS=Xenopus
laevis GN=plxdc2 PE=2 SV=1
Length = 513

Score = 34.3 bits (77), Expect = 0.27
Identities = 18/79 (22%), Positives = 42/79 (53%)
Frame = +2

Query: 170 YSDLAFPLMEIASTDYHVKNSLREICLIQKRNSIASIKELCG*ALNCIFQFHQKALSLRE 349
Y D+ P+M+I+ST++ VK L + ++ + I+++ IF++H+ L + +
Sbjct: 244 YKDIPVPVMQISSTNHPVKVGLSDAFVV-----VHKIQQIPNVRRRTIFEYHRVELEMTK 298

Query: 350 QLCYSSLVLLHIVESFCYN 406
+S++ +L + +N
Sbjct: 299 ITSFSAVEMLPLATCLQFN 317


>sp|Q9D0M2|CDCA7_MOUSE Cell division cycle-associated protein 7
OS=Mus musculus GN=Cdca7 PE=1 SV=1
Length = 382

Score = 32.3 bits (72), Expect = 1.0
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -3

Query: 445 KERFPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSF 329
+E + EED + + + N++QNKA + KL+SE +SF
Sbjct: 107 EEEEEEEEEDGMNFLEKRALNIKQNKAMLAKLMSELESF 145


>sp|Q5K2P4|K1C13_PROAT Keratin, type I cytoskeletal 13
OS=Protopterus aethiopicus GN=KRT13 PE=1 SV=1
Length = 465

Score = 31.6 bits (70), Expect = 1.8
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = -3

Query: 454 QALKERFPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSFLVELKDTVQGL 296
+ L E+ + EDW +A +++ +N A+ T+ + T++ + ELK T+QGL
Sbjct: 278 EQLAEKNRKDAEDWF---MKASEDLNKNVASSTEAIQTTKTEINELKRTIQGL 327


>sp|Q4KM91|CDCA7_RAT Cell division cycle-associated protein 7
OS=Rattus norvegicus GN=Cdca7 PE=2 SV=1
Length = 377

Score = 31.6 bits (70), Expect = 1.8
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = -3

Query: 430 QAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSF 329
+ EED + + + N++QNKA + KL+SE +SF
Sbjct: 108 EEEEDGMNFLEKRALNIKQNKAMLAKLMSELESF 141


>sp|Q4R5E9|SCG2_MACFA Secretogranin-2 OS=Macaca fascicularis GN=SCG2
PE=2 SV=1
Length = 617

Score = 31.2 bits (69), Expect = 2.3
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = -3

Query: 448 LKERFPQAEEDWLPVVAEALDNVQQNKAAVTK-----LLSETQSFLVELKD 311
L ER +EEDW+ ++ EAL V+ +V K L+ ++F +++ D
Sbjct: 99 LPERDSLSEEDWMRIILEALRQVENEPQSVPKENKPHALNSEKNFPIDMSD 149


>sp|P58994|GSH1_BUCAP Glutamate--cysteine ligase OS=Buchnera
aphidicola subsp. Schizaphis graminum GN=gshA PE=3 SV=1
Length = 518

Score = 30.8 bits (68), Expect = 3.1
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1

Query: 223 QKFSTRNLFDSEKEFHSFHQRIMWLSLELYLSIPPKSFESPRATLLQ 363
+KFS + D + EF + I+ + ELY I PK +P +LL+
Sbjct: 270 KKFSKIGIKDKQGEFLQLNTNILQMESELYTPIRPKRQTNPGESLLE 316


>sp|Q9UJ42|GP160_HUMAN Probable G-protein coupled receptor 160
OS=Homo sapiens GN=GPR160 PE=2 SV=1
Length = 338

Score = 29.6 bits (65), Expect = 6.8
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1

Query: 202 CIDRLSCQKFS--TRNLFDSEKEFHSFHQRIMWLSLELYLSIPPKSFESPRATLLQQPCF 375
CID C FS T+ F +K F+ F ++W+S+ Y+ P ++S +A Q +
Sbjct: 117 CIDY--CLNFSKTTKLSFKCQKLFYFFTVILIWISVLAYVLGDPAIYQSLKA----QNAY 170

Query: 376 AAHC 387
+ HC
Sbjct: 171 SRHC 174


>sp|Q9R1Y5|HIC1_MOUSE Hypermethylated in cancer 1 protein OS=Mus
musculus GN=Hic1 PE=1 SV=2
Length = 892

Score = 29.3 bits (64), Expect = 8.7
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = -3

Query: 436 FPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSFLVELKDTVQGL 296
FP+ + AE L QQ+KAA +LL++T FL + K ++ L
Sbjct: 804 FPEGVFAVARLTAEQLSLKQQDKAAAAELLAQTTHFLHDPKVALESL 850


>sp|Q14526|HIC1_HUMAN Hypermethylated in cancer 1 protein OS=Homo
sapiens GN=HIC1 PE=1 SV=4
Length = 733

Score = 29.3 bits (64), Expect = 8.7
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = -3

Query: 436 FPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSFLVELKDTVQGL 296
FP+ + AE L QQ+KAA +LL++T FL + K ++ L
Sbjct: 645 FPEGVFAVARLTAEQLSLKQQDKAAAAELLAQTTHFLHDPKVALESL 691


>sp|A1ATJ6|DNLJ_PELPD DNA ligase OS=Pelobacter propionicus (strain
DSM 2379) GN=ligA PE=3 SV=1
Length = 704

Score = 29.3 bits (64), Expect = 8.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 13/61 (21%)
Frame = -3

Query: 454 QALKERFPQAEEDWLPV------VAEALDNVQQN-------KAAVTKLLSETQSFLVELK 314
Q L+ RFP+ + P V+E VQ + VTK+LSE +S + ELK
Sbjct: 55 QELESRFPEFQSADSPTQIVGGSVSEGFKKVQHSVPMLSIENKPVTKMLSEVRSIIKELK 114

Query: 313 D 311
D
Sbjct: 115 D 115


tr_hit_id B4LEK6
Definition tr|B4LEK6|B4LEK6_DROVI GJ13053 OS=Drosophila virilis
Align length 49
Score (bit) 36.2
E-value 0.83
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920653|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_G09.
(465 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4LEK6|B4LEK6_DROVI GJ13053 OS=Drosophila virilis GN=GJ13053 ... 36 0.83
tr|B8APX3|B8APX3_ORYSI Putative uncharacterized protein OS=Oryza... 34 3.1
tr|Q6AV56|Q6AV56_ORYSJ Putative centromere protein (Putative unc... 34 4.1
tr|Q0DPG9|Q0DPG9_ORYSJ Os03g0691500 protein OS=Oryza sativa subs... 34 4.1

>tr|B4LEK6|B4LEK6_DROVI GJ13053 OS=Drosophila virilis GN=GJ13053
PE=4 SV=1
Length = 739

Score = 36.2 bits (82), Expect = 0.83
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = -3

Query: 460 RKQALKERFPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSFLVELK 314
R +AL E P +EED +P + L + +Q + V ++LSE Q L EL+
Sbjct: 262 RAKALAEELPTSEEDHIPSEEDILSDTEQVLSEVEQVLSEAQHALSELE 310


>tr|B8APX3|B8APX3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_13096 PE=4 SV=1
Length = 806

Score = 34.3 bits (77), Expect = 3.1
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -3

Query: 463 CRKQALKERFPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSFLVELKDTVQ 302
CR+Q L E F Q E DW ++AE + A++++ +S V++K V+
Sbjct: 551 CREQGLMEMFDQEEADWYTLIAE-------KENAISEIQENVESAQVDIKHLVE 597


>tr|Q6AV56|Q6AV56_ORYSJ Putative centromere protein (Putative
uncharacterized protein) (BHLH family protein, putative,
expressed) OS=Oryza sativa subsp. japonica
GN=OSJNBb0101N11.5 PE=4 SV=1
Length = 1515

Score = 33.9 bits (76), Expect = 4.1
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -3

Query: 463 CRKQALKERFPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSFLVELKDTVQ 302
CR+Q L E F Q E DW ++AE + A++++ +S V++K V+
Sbjct: 881 CREQELMEMFDQEEADWYTLIAE-------KENAISEIQENVESAQVDIKHLVE 927


>tr|Q0DPG9|Q0DPG9_ORYSJ Os03g0691500 protein OS=Oryza sativa subsp.
japonica GN=Os03g0691500 PE=4 SV=1
Length = 1051

Score = 33.9 bits (76), Expect = 4.1
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -3

Query: 463 CRKQALKERFPQAEEDWLPVVAEALDNVQQNKAAVTKLLSETQSFLVELKDTVQ 302
CR+Q L E F Q E DW ++AE + A++++ +S V++K V+
Sbjct: 903 CREQELMEMFDQEEADWYTLIAE-------KENAISEIQENVESAQVDIKHLVE 949