BP920614
Clone id YMU001_000139_C08
Library
Length 424
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTTCCTTCCTTGTCTATAGATGAAGCTTCAGTCAATCCAGTCAGTTTCCCGGAAGCATCT
TTGCTGAGAATGGATGAGCGTCGTCTCGAGCTTATTGAAACCTGCACCTTGTATAACAGA
AGAAGAGAGAGGAGCAGGGAAGACAATGGGGCAAAAAAGAGAAGCAAAAATGGCACACAG
AGAATTAAGAAGGGGATGAAAAAGGGAACGAGGGTCACCAGCAGAACACAGGATGCTTGC
CTATGCGAGCAGAAGGCATTGCCGATGCAAGGAGGTAAGGAGGGAGCCATGGCCTGTGTC
CCTTTGAACGTATGCTTGGAAAAACACAGCACAAATGAGCTACTCTGAGGCGTCAGGAGG
AGGCCCCATATCACGGAGGATGCTGAAAGGTTGCGGGTAAAGCTTCCATTAAAGCTCCAC
GAAG
■■Homology search results ■■ -
sp_hit_id Q9DB00
Definition sp|Q9DB00|GON4L_MOUSE GON-4-like protein OS=Mus musculus
Align length 108
Score (bit) 34.3
E-value 0.21
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920614|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_C08.
(424 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9DB00|GON4L_MOUSE GON-4-like protein OS=Mus musculus GN=Gon4... 34 0.21
sp|A1WWU7|SYS_HALHL Seryl-tRNA synthetase OS=Halorhodospira halo... 34 0.27
sp|Q6BLU9|PRP28_DEBHA Pre-mRNA-splicing ATP-dependent RNA helica... 32 1.0
sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-r... 32 1.4
sp|P35405|ADA2C_DIDMA Alpha-2C adrenergic receptor OS=Didelphis ... 31 1.8
sp|P0C230|PRT_OSITU Protamine OS=Osilinus turbinatus PE=1 SV=1 31 2.3
sp|Q5BKG8|NUSAP_XENTR Nucleolar and spindle-associated protein 1... 30 3.0
sp|Q1PSW8|LIN41_MOUSE Tripartite motif-containing protein 71 OS=... 30 3.0
sp|Q95XZ5|NPBL_CAEEL Nipped-B-like protein pqn-85 OS=Caenorhabdi... 30 4.0
sp|Q6P2W5|ARGL1_XENTR Arginine and glutamate-rich protein 1 OS=X... 30 4.0
sp|Q4KLS8|ARGL1_XENLA Arginine and glutamate-rich protein 1 OS=X... 30 4.0
sp|Q9BZJ6|GPR63_HUMAN Probable G-protein coupled receptor 63 OS=... 30 5.0
sp|P54816|TBP7_CAEEL TAT-binding homolog 7 OS=Caenorhabditis ele... 30 5.2
sp|Q5KNY5|PPIL4_CRYNE Peptidyl-prolyl cis-trans isomerase-like 4... 30 5.2
sp|Q9EQQ3|GPR63_MOUSE Probable G-protein coupled receptor 63 OS=... 29 8.6
sp|Q1WVB3|SYS_LACS1 Seryl-tRNA synthetase OS=Lactobacillus saliv... 29 8.8
sp|Q9A347|SYR_CAUCR Arginyl-tRNA synthetase OS=Caulobacter cresc... 29 8.8
sp|P83213|HSP3_MURBR Sperm protamine P3 OS=Murex brandaris PE=1 ... 29 8.8

>sp|Q9DB00|GON4L_MOUSE GON-4-like protein OS=Mus musculus GN=Gon4l
PE=1 SV=2
Length = 2260

Score = 34.3 bits (77), Expect = 0.21
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = +1

Query: 22 EASVNPVSFPEASLLRMDERRLELIETCTLYNRRRERSREDNGAKKRSKNGTQRIK--KG 195
+ S P P L+R E E +E L+ E+ E++ KK++K GT+R + KG
Sbjct: 202 DGSAFPQDKPLGPLVRQAE---EEMEDGGLFIPTEEQDSEESDKKKKTKKGTKRKRDGKG 258

Query: 196 MKKGTRVTSRTQDACLCEQKALPMQGGKEGAMACVPLNVCLEKHSTNE 339
+++GT V D L + L G K+ + V + L + TNE
Sbjct: 259 LEQGTMVYDPKLDDML--DRTLE-DGAKQHNLTAVNVRNILHEVITNE 303


>sp|A1WWU7|SYS_HALHL Seryl-tRNA synthetase OS=Halorhodospira
halophila (strain DSM 244 / SL1) GN=serS PE=3 SV=1
Length = 425

Score = 33.9 bits (76), Expect = 0.27
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1

Query: 46 FPEASLLRMDERRLELI-ETCTLYNRRRERSREDNGAKKRSKN 171
F A +D RR +L ET TL N+R ERS+E AKKR ++
Sbjct: 25 FDAAGYRALDARRRDLQQETQTLQNQRNERSKEIGAAKKRGED 67


>sp|Q6BLU9|PRP28_DEBHA Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28 OS=Debaryomyces hansenii GN=PRP28 PE=3 SV=2
Length = 580

Score = 32.0 bits (71), Expect = 1.0
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = +1

Query: 61 LLRMDERRLELIETCTLYNRRRERSREDNGAKKRSKNGTQ------RIKKGMKKG 207
L + + ++L L + +++R++S +NGAKKR N + +I K +KKG
Sbjct: 27 LSKSERQKLSLQRNQEIQDKKRQQSTVNNGAKKRYNNSIEDNPEPKKINKKLKKG 81


>sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-rich
1 OS=Caenorhabditis elegans GN=rsp-1 PE=2 SV=1
Length = 312

Score = 31.6 bits (70), Expect = 1.4
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1

Query: 115 NRRRERSREDNGAKKRSKNGTQRIKKGMKKGTRVTSRTQDA 237
+RRR RSR + +K RS++ +R ++ K +R SR++ A
Sbjct: 222 DRRRSRSRSSSRSKSRSRSPPKRSRRESKSKSRSRSRSRSA 262


>sp|P35405|ADA2C_DIDMA Alpha-2C adrenergic receptor OS=Didelphis
marsupialis virginiana GN=ADRA2C PE=2 SV=2
Length = 469

Score = 31.2 bits (69), Expect = 1.8
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1

Query: 85 LELIETCTLYNRRRERSREDNGAKKRSK 168
+EL E+ T NRRR RSRE+ A+K S+
Sbjct: 304 IELEESSTSENRRRRRSREEAAARKGSR 331


>sp|P0C230|PRT_OSITU Protamine OS=Osilinus turbinatus PE=1 SV=1
Length = 106

Score = 30.8 bits (68), Expect = 2.3
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1

Query: 79 RRLELIETCTLYNRRRERSREDNGAKKRS-KNGTQRIKKGMKKGTRVTSR 225
RR ++ RRR RSR+ G ++R K +R+K+ +KG R T R
Sbjct: 50 RRRSASRRRSVSRRRRRRSRKSRGRRRRGRKVRRRRVKRAGRKGRRRTRR 99


>sp|Q5BKG8|NUSAP_XENTR Nucleolar and spindle-associated protein 1
OS=Xenopus tropicalis GN=nusap1 PE=2 SV=2
Length = 500

Score = 30.4 bits (67), Expect = 3.0
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1

Query: 115 NRRRERSREDNGAKKRSKNGTQRIKKGMKKGTRVTS 222
N+ R+RSR ++ +K+ + T + +K KK + VTS
Sbjct: 141 NKHRKRSRSEDTSKQNNLESTGKTEKRQKKASNVTS 176


>sp|Q1PSW8|LIN41_MOUSE Tripartite motif-containing protein 71 OS=Mus
musculus GN=Trim71 PE=2 SV=1
Length = 855

Score = 30.4 bits (67), Expect = 3.0
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2

Query: 266 CKEVRREPWPVSL*TYAWKNTAQMSYSEASGGGP 367
CKE+ P P+S + A +++Q S S A GGGP
Sbjct: 15 CKEMCGSPAPLSSNSSASSSSSQTSTSSAGGGGP 48


>sp|Q95XZ5|NPBL_CAEEL Nipped-B-like protein pqn-85 OS=Caenorhabditis
elegans GN=pqn-85 PE=2 SV=2
Length = 2203

Score = 30.0 bits (66), Expect = 4.0
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +1

Query: 28 SVNPVSFPEASLLRMDERR-LELIETCTLYNRRRERSREDNGAKKRSKNGTQRIKKGMKK 204
S N S P+ S + ++L+++ + ++ + ED AK RSK +K+G K
Sbjct: 987 SNNGYSLPDGSWISTTTALFIQLVQSTIKIPKFKKHADEDELAK-RSKKEEAMVKEGFLK 1045

Query: 205 GTRVTSRTQDACL--CEQKALPMQGGKE 282
++VT+ + L C QK M G ++
Sbjct: 1046 ASKVTNAFLNGFLAKCSQKGNKMDGEED 1073


>sp|Q6P2W5|ARGL1_XENTR Arginine and glutamate-rich protein 1
OS=Xenopus tropicalis GN=arglu1 PE=2 SV=1
Length = 265

Score = 30.0 bits (66), Expect = 4.0
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1

Query: 112 YNRRRERSREDNGAKKRSKNGTQRIKKGMKKGTRVTSRTQDACLCEQK 255
+N++R RSRE +KRSK ++ K+ ++ +R SR+ A E++
Sbjct: 20 HNKKRSRSREKERVRKRSK--SRESKRNRRRESRSRSRSNTASRRERE 65


tr_hit_id B3N0D7
Definition tr|B3N0D7|B3N0D7_DROAN GF21828 OS=Drosophila ananassae
Align length 99
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920614|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_C08.
(424 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3N0D7|B3N0D7_DROAN GF21828 OS=Drosophila ananassae GN=GF2182... 35 2.4
tr|Q59ZV8|Q59ZV8_CANAL Potential nuclear cohesin complex subunit... 34 4.1
tr|A8WTA0|A8WTA0_CAEBR CBR-RSP-1 protein OS=Caenorhabditis brigg... 33 5.3
tr|B5DM84|B5DM84_DROPS GA27143 OS=Drosophila pseudoobscura pseud... 33 7.0
tr|B4GYJ3|B4GYJ3_DROPE GL19788 OS=Drosophila persimilis GN=GL197... 33 7.0

>tr|B3N0D7|B3N0D7_DROAN GF21828 OS=Drosophila ananassae GN=GF21828
PE=4 SV=1
Length = 1495

Score = 34.7 bits (78), Expect = 2.4
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Frame = +1

Query: 19 DEASVNPVSFPEASLLRMDERRLELIETCTLYNRRRERSREDNGAKKRSKNGTQR-IKKG 195
+E+++ P++ E + ++ E ++ L RRR RS E NG KK K ++ IKKG
Sbjct: 464 EESAILPLNVAEKN---REKESSEKVQIDLLPTRRRIRSLEINGGKKWLKKAIRKAIKKG 520

Query: 196 MKKG----------TRVTSRTQDACLCEQKALPMQGGKE 282
+K T + R +D ++++L + GKE
Sbjct: 521 ARKAQRRVFKGPEETEESEREEDTLRRKRRSLGTEIGKE 559


>tr|Q59ZV8|Q59ZV8_CANAL Potential nuclear cohesin complex subunit
OS=Candida albicans GN=IRR1 PE=4 SV=1
Length = 665

Score = 33.9 bits (76), Expect = 4.1
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1

Query: 28 SVNPVSFPEASLLRMDER-RLELIETCTLYNRRRERSREDNGAKKRSKNGTQRIKKGMKK 204
+ NPVS+ E+S +E E + T +R+ ++ + +KKR K+GT+ KK +K+
Sbjct: 10 AANPVSYRESSDSEAEESFEPEEDDYSTRPTKRKANNKSSSASKKRKKSGTKTSKKSLKQ 69


>tr|A8WTA0|A8WTA0_CAEBR CBR-RSP-1 protein OS=Caenorhabditis briggsae
GN=Cbr-rsp-1 PE=4 SV=1
Length = 304

Score = 33.5 bits (75), Expect = 5.3
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +1

Query: 115 NRRRERSREDNGAKKRSKNGTQRIKKGMKKGTRVTSRTQD 234
+RRR RSR + +K RS++ +R K+ K +R SR+ D
Sbjct: 219 DRRRSRSRSSSRSKSRSRSPVKRAKRESKSRSRSRSRSAD 258


>tr|B5DM84|B5DM84_DROPS GA27143 OS=Drosophila pseudoobscura
pseudoobscura GN=GA27143 PE=4 SV=1
Length = 226

Score = 33.1 bits (74), Expect = 7.0
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = +1

Query: 73 DERRLELIETCTLYNRRRER----SREDNGAKKRSKNGTQRIKKGMKKGTRVTSRTQD 234
DE +L++ C +RR++R S ED+G K SK+G ++ +K +KK + R Q+
Sbjct: 124 DEEAEKLLQQCAELSRRKKRGGSSSEEDSGEGKSSKSG-RKERKQLKKMCKELKRQQE 180


>tr|B4GYJ3|B4GYJ3_DROPE GL19788 OS=Drosophila persimilis GN=GL19788
PE=4 SV=1
Length = 226

Score = 33.1 bits (74), Expect = 7.0
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = +1

Query: 73 DERRLELIETCTLYNRRRER----SREDNGAKKRSKNGTQRIKKGMKKGTRVTSRTQD 234
DE +L++ C +RR++R S ED+G K SK+G ++ +K +KK + R Q+
Sbjct: 124 DEEAEKLLQQCAELSRRKKRGGSSSEEDSGEGKSSKSG-RKERKQLKKMCKELKRQQE 180