BP920614 |
Clone id |
YMU001_000139_C08 |
Library |
YMU01 |
Length |
424 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000139_C08. |
Accession |
BP920614 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1613Contig1 |
Sequence |
CTTCCTTCCTTGTCTATAGATGAAGCTTCAGTCAATCCAGTCAGTTTCCCGGAAGCATCT TTGCTGAGAATGGATGAGCGTCGTCTCGAGCTTATTGAAACCTGCACCTTGTATAACAGA AGAAGAGAGAGGAGCAGGGAAGACAATGGGGCAAAAAAGAGAAGCAAAAATGGCACACAG AGAATTAAGAAGGGGATGAAAAAGGGAACGAGGGTCACCAGCAGAACACAGGATGCTTGC CTATGCGAGCAGAAGGCATTGCCGATGCAAGGAGGTAAGGAGGGAGCCATGGCCTGTGTC CCTTTGAACGTATGCTTGGAAAAACACAGCACAAATGAGCTACTCTGAGGCGTCAGGAGG AGGCCCCATATCACGGAGGATGCTGAAAGGTTGCGGGTAAAGCTTCCATTAAAGCTCCAC GAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9DB00 |
Definition |
sp|Q9DB00|GON4L_MOUSE GON-4-like protein OS=Mus musculus |
Align length |
108 |
Score (bit) |
34.3 |
E-value |
0.21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920614|Adiantum capillus-veneris mRNA, clone: YMU001_000139_C08. (424 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9DB00|GON4L_MOUSE GON-4-like protein OS=Mus musculus GN=Gon4... 34 0.21 sp|A1WWU7|SYS_HALHL Seryl-tRNA synthetase OS=Halorhodospira halo... 34 0.27 sp|Q6BLU9|PRP28_DEBHA Pre-mRNA-splicing ATP-dependent RNA helica... 32 1.0 sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-r... 32 1.4 sp|P35405|ADA2C_DIDMA Alpha-2C adrenergic receptor OS=Didelphis ... 31 1.8 sp|P0C230|PRT_OSITU Protamine OS=Osilinus turbinatus PE=1 SV=1 31 2.3 sp|Q5BKG8|NUSAP_XENTR Nucleolar and spindle-associated protein 1... 30 3.0 sp|Q1PSW8|LIN41_MOUSE Tripartite motif-containing protein 71 OS=... 30 3.0 sp|Q95XZ5|NPBL_CAEEL Nipped-B-like protein pqn-85 OS=Caenorhabdi... 30 4.0 sp|Q6P2W5|ARGL1_XENTR Arginine and glutamate-rich protein 1 OS=X... 30 4.0 sp|Q4KLS8|ARGL1_XENLA Arginine and glutamate-rich protein 1 OS=X... 30 4.0 sp|Q9BZJ6|GPR63_HUMAN Probable G-protein coupled receptor 63 OS=... 30 5.0 sp|P54816|TBP7_CAEEL TAT-binding homolog 7 OS=Caenorhabditis ele... 30 5.2 sp|Q5KNY5|PPIL4_CRYNE Peptidyl-prolyl cis-trans isomerase-like 4... 30 5.2 sp|Q9EQQ3|GPR63_MOUSE Probable G-protein coupled receptor 63 OS=... 29 8.6 sp|Q1WVB3|SYS_LACS1 Seryl-tRNA synthetase OS=Lactobacillus saliv... 29 8.8 sp|Q9A347|SYR_CAUCR Arginyl-tRNA synthetase OS=Caulobacter cresc... 29 8.8 sp|P83213|HSP3_MURBR Sperm protamine P3 OS=Murex brandaris PE=1 ... 29 8.8
>sp|Q9DB00|GON4L_MOUSE GON-4-like protein OS=Mus musculus GN=Gon4l PE=1 SV=2 Length = 2260
Score = 34.3 bits (77), Expect = 0.21 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 2/108 (1%) Frame = +1
Query: 22 EASVNPVSFPEASLLRMDERRLELIETCTLYNRRRERSREDNGAKKRSKNGTQRIK--KG 195 + S P P L+R E E +E L+ E+ E++ KK++K GT+R + KG Sbjct: 202 DGSAFPQDKPLGPLVRQAE---EEMEDGGLFIPTEEQDSEESDKKKKTKKGTKRKRDGKG 258
Query: 196 MKKGTRVTSRTQDACLCEQKALPMQGGKEGAMACVPLNVCLEKHSTNE 339 +++GT V D L + L G K+ + V + L + TNE Sbjct: 259 LEQGTMVYDPKLDDML--DRTLE-DGAKQHNLTAVNVRNILHEVITNE 303
>sp|A1WWU7|SYS_HALHL Seryl-tRNA synthetase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=serS PE=3 SV=1 Length = 425
Score = 33.9 bits (76), Expect = 0.27 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Frame = +1
Query: 46 FPEASLLRMDERRLELI-ETCTLYNRRRERSREDNGAKKRSKN 171 F A +D RR +L ET TL N+R ERS+E AKKR ++ Sbjct: 25 FDAAGYRALDARRRDLQQETQTLQNQRNERSKEIGAAKKRGED 67
>sp|Q6BLU9|PRP28_DEBHA Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Debaryomyces hansenii GN=PRP28 PE=3 SV=2 Length = 580
Score = 32.0 bits (71), Expect = 1.0 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 6/55 (10%) Frame = +1
Query: 61 LLRMDERRLELIETCTLYNRRRERSREDNGAKKRSKNGTQ------RIKKGMKKG 207 L + + ++L L + +++R++S +NGAKKR N + +I K +KKG Sbjct: 27 LSKSERQKLSLQRNQEIQDKKRQQSTVNNGAKKRYNNSIEDNPEPKKINKKLKKG 81
>sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-rich 1 OS=Caenorhabditis elegans GN=rsp-1 PE=2 SV=1 Length = 312
Score = 31.6 bits (70), Expect = 1.4 Identities = 15/41 (36%), Positives = 26/41 (63%) Frame = +1
Query: 115 NRRRERSREDNGAKKRSKNGTQRIKKGMKKGTRVTSRTQDA 237 +RRR RSR + +K RS++ +R ++ K +R SR++ A Sbjct: 222 DRRRSRSRSSSRSKSRSRSPPKRSRRESKSKSRSRSRSRSA 262
>sp|P35405|ADA2C_DIDMA Alpha-2C adrenergic receptor OS=Didelphis marsupialis virginiana GN=ADRA2C PE=2 SV=2 Length = 469
Score = 31.2 bits (69), Expect = 1.8 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +1
Query: 85 LELIETCTLYNRRRERSREDNGAKKRSK 168 +EL E+ T NRRR RSRE+ A+K S+ Sbjct: 304 IELEESSTSENRRRRRSREEAAARKGSR 331
>sp|P0C230|PRT_OSITU Protamine OS=Osilinus turbinatus PE=1 SV=1 Length = 106
Score = 30.8 bits (68), Expect = 2.3 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = +1
Query: 79 RRLELIETCTLYNRRRERSREDNGAKKRS-KNGTQRIKKGMKKGTRVTSR 225 RR ++ RRR RSR+ G ++R K +R+K+ +KG R T R Sbjct: 50 RRRSASRRRSVSRRRRRRSRKSRGRRRRGRKVRRRRVKRAGRKGRRRTRR 99
>sp|Q5BKG8|NUSAP_XENTR Nucleolar and spindle-associated protein 1 OS=Xenopus tropicalis GN=nusap1 PE=2 SV=2 Length = 500
Score = 30.4 bits (67), Expect = 3.0 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = +1
Query: 115 NRRRERSREDNGAKKRSKNGTQRIKKGMKKGTRVTS 222 N+ R+RSR ++ +K+ + T + +K KK + VTS Sbjct: 141 NKHRKRSRSEDTSKQNNLESTGKTEKRQKKASNVTS 176
>sp|Q1PSW8|LIN41_MOUSE Tripartite motif-containing protein 71 OS=Mus musculus GN=Trim71 PE=2 SV=1 Length = 855
Score = 30.4 bits (67), Expect = 3.0 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2
Query: 266 CKEVRREPWPVSL*TYAWKNTAQMSYSEASGGGP 367 CKE+ P P+S + A +++Q S S A GGGP Sbjct: 15 CKEMCGSPAPLSSNSSASSSSSQTSTSSAGGGGP 48
>sp|Q95XZ5|NPBL_CAEEL Nipped-B-like protein pqn-85 OS=Caenorhabditis elegans GN=pqn-85 PE=2 SV=2 Length = 2203
Score = 30.0 bits (66), Expect = 4.0 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 3/88 (3%) Frame = +1
Query: 28 SVNPVSFPEASLLRMDERR-LELIETCTLYNRRRERSREDNGAKKRSKNGTQRIKKGMKK 204 S N S P+ S + ++L+++ + ++ + ED AK RSK +K+G K Sbjct: 987 SNNGYSLPDGSWISTTTALFIQLVQSTIKIPKFKKHADEDELAK-RSKKEEAMVKEGFLK 1045
Query: 205 GTRVTSRTQDACL--CEQKALPMQGGKE 282 ++VT+ + L C QK M G ++ Sbjct: 1046 ASKVTNAFLNGFLAKCSQKGNKMDGEED 1073
>sp|Q6P2W5|ARGL1_XENTR Arginine and glutamate-rich protein 1 OS=Xenopus tropicalis GN=arglu1 PE=2 SV=1 Length = 265
Score = 30.0 bits (66), Expect = 4.0 Identities = 16/48 (33%), Positives = 29/48 (60%) Frame = +1
Query: 112 YNRRRERSREDNGAKKRSKNGTQRIKKGMKKGTRVTSRTQDACLCEQK 255 +N++R RSRE +KRSK ++ K+ ++ +R SR+ A E++ Sbjct: 20 HNKKRSRSREKERVRKRSK--SRESKRNRRRESRSRSRSNTASRRERE 65
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B3N0D7 |
Definition |
tr|B3N0D7|B3N0D7_DROAN GF21828 OS=Drosophila ananassae |
Align length |
99 |
Score (bit) |
34.7 |
E-value |
2.4 |
Report |
|