BP920317 |
Clone id |
YMU001_000135_F06 |
Library |
YMU01 |
Length |
423 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000135_F06. |
Accession |
BP920317 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GAATGCTGTTGAGCAGGCGTACGCGACCAGGCTCTTAGCTGGTCGCCACCGTAAAGACTT CATGGCTCCACACCCCCTGAGTTTAATCTCAGGAGCCAGCACCCTCGCTTTTGTTGCACT TACAGCTGGCCCAAAATCAAGACACACCAACGGCCAGCCCCTAGAGTTTCTGGCTACGCC CTTCACACTCCACCAAAGCCCAGAGACTATGTCCTCCACTCTCTACCTTGGCTTGCTACA GCCTGCGCTGTTACGGCCCTGCCTTGAAGTTTCCCCACACACACATACAATGTCTTGCTA GCCTGCTGTGCTGCATAACTCCCCTCTCTCCCGTAGCTTGTTGCAACCCAACGAGCTCGC TTGTGATGCCGTCAAGAGCTCCCACCGACCATACAGCGCTGATATCCTCGTTCCACTTTC TAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8YRC9 |
Definition |
sp|Q8YRC9|THIG_ANASP Bifunctional protein goxB/thiG OS=Anabaena sp. (strain PCC 7120) |
Align length |
36 |
Score (bit) |
32.7 |
E-value |
0.61 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A3IP68 |
Definition |
tr|A3IP68|A3IP68_9CHRO Putative uncharacterized protein OS=Cyanothece sp. CCY 0110 |
Align length |
51 |
Score (bit) |
36.6 |
E-value |
0.63 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920317|Adiantum capillus-veneris mRNA, clone: YMU001_000135_F06. (423 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A3IP68|A3IP68_9CHRO Putative uncharacterized protein OS=Cyano... 37 0.63 tr|A7SUX5|A7SUX5_NEMVE Predicted protein (Fragment) OS=Nematoste... 36 0.83 tr|B6Q442|B6Q442_PENMA Autophagy protein Atg13, putative OS=Peni... 35 1.4 tr|O89525|O89525_9POTY Polyprotein OS=Ryegrass mosaic virus PE=4... 35 2.4 tr|B1WZV5|B1WZV5_CYAA5 Putative uncharacterized protein OS=Cyano... 34 4.1 tr|A9UUU4|A9UUU4_MONBE Predicted protein OS=Monosiga brevicollis... 34 4.1 tr|B8LYK9|B8LYK9_9EURO Autophagy protein Atg13, putative OS=Tala... 34 4.1 tr|Q8NAH9|Q8NAH9_HUMAN cDNA FLJ35331 fis, clone PROST2014659 OS=... 33 5.4 tr|Q8DLX3|Q8DLX3_THEEB Tlr0353 protein OS=Thermosynechococcus el... 33 7.0 tr|Q8LME0|Q8LME0_ORYSJ Putative uncharacterized protein OJ1325D0... 33 7.0 tr|Q5C745|Q5C745_SCHJA SJCHGC07993 protein (Fragment) OS=Schisto... 33 7.0 tr|Q4J5G3|Q4J5G3_AZOVI Glucose-inhibited division protein A subf... 33 7.0 tr|B5CY76|B5CY76_9BACE Putative uncharacterized protein OS=Bacte... 33 7.0 tr|Q648I1|Q648I1_9ARCH Putative uncharacterized protein OS=uncul... 33 7.0 tr|B1KCU4|B1KCU4_BURCC Putative uncharacterized protein OS=Burkh... 33 9.2 tr|Q010M0|Q010M0_OSTTA Prolylcarboxypeptidase (Angiotensinase C)... 33 9.2 tr|A7RVT7|A7RVT7_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 9.2
>tr|A3IP68|A3IP68_9CHRO Putative uncharacterized protein OS=Cyanothece sp. CCY 0110 GN=CY0110_25918 PE=4 SV=1 Length = 273
Score = 36.6 bits (83), Expect = 0.63 Identities = 18/51 (35%), Positives = 29/51 (56%) Frame = +1
Query: 124 SWPKIKTHQRPAPRVSGYALHTPPKPRDYVLHSLPWLATACAVTALP*SFP 276 ++P+ +Q V+G+ +H+P P DY+L S ++ T CAV A P P Sbjct: 159 AYPEPDAYQGQKADVTGFVVHSPLLPEDYILLS-RFIITCCAVDAYPVGLP 208
>tr|A7SUX5|A7SUX5_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g133066 PE=4 SV=1 Length = 185
Score = 36.2 bits (82), Expect = 0.83 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = +3
Query: 207 LCPPLSTLACYSLRCYGPALKFPHTHIQCLASLLCCITP----LSPVACC 344 LC PL L C+SL C P L ++ C+ LCC+ P + P CC Sbjct: 113 LCHPLPLL-CHSLYCVSPYLCCVTPYLCCVIPYLCCVIPYLCCVIPYLCC 161
>tr|B6Q442|B6Q442_PENMA Autophagy protein Atg13, putative OS=Penicillium marneffei ATCC 18224 GN=PMAA_030310 PE=4 SV=1 Length = 974
Score = 35.4 bits (80), Expect = 1.4 Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 6/125 (4%) Frame = +2
Query: 50 RKDFMAPHPLSLISGASTLAFVALTAGPKSRHTNGQPLEFLATPFTLHQSPETMSSTL-- 223 RKD ++P + + A+ ALT + R TN + +++ F LH+S + S L Sbjct: 581 RKDLLSPVKKAAVDAATRRTSAALTRFQRMRDTNAALSDSMSSSFHLHRSSSSSSRQLSS 640
Query: 224 ----YLGLLQPALLRPCLEVSPHTHTMSC*PAVLHNSPLSRSLLQPNELACDAVKSSHRP 391 G P VSPHT ++P RS L N + + + P Sbjct: 641 VPPMVAGTSISTASSPGKPVSPHT----------PHTPAIRSRLGSNNIITNDRERDASP 690
Query: 392 YSADI 406 +D+ Sbjct: 691 RQSDV 695
>tr|O89525|O89525_9POTY Polyprotein OS=Ryegrass mosaic virus PE=4 SV=1 Length = 3086
Score = 34.7 bits (78), Expect = 2.4 Identities = 20/49 (40%), Positives = 25/49 (51%) Frame = +2
Query: 32 LLAGRHRKDFMAPHPLSLISGASTLAFVALTAGPKSRHTNGQPLEFLAT 178 LLAG +K M H LS SG T A+ KSR+ G +E +AT Sbjct: 1669 LLAGERKKQEMFTHHLSTTSGGYTFGLNAIAMCIKSRYAKGYCIENIAT 1717
>tr|B1WZV5|B1WZV5_CYAA5 Putative uncharacterized protein OS=Cyanothece (strain ATCC 51142) GN=cce_3506 PE=4 SV=1 Length = 275
Score = 33.9 bits (76), Expect = 4.1 Identities = 16/51 (31%), Positives = 29/51 (56%) Frame = +1
Query: 124 SWPKIKTHQRPAPRVSGYALHTPPKPRDYVLHSLPWLATACAVTALP*SFP 276 ++P+ +Q V+G+ +H+P P DY+L + ++ + CAV A P P Sbjct: 161 AYPEPDAYQGQKANVTGFVVHSPLLPDDYILLT-RFIISCCAVDAYPVGLP 210
>tr|A9UUU4|A9UUU4_MONBE Predicted protein OS=Monosiga brevicollis GN=23789 PE=4 SV=1 Length = 17829
Score = 33.9 bits (76), Expect = 4.1 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 1/114 (0%) Frame = +2
Query: 83 LISGASTLAFVALTAGPKSRHTNGQPLEFLATPFTLHQSPETMSSTLYLGLLQPALLRPC 262 +I AST+A A + P+ H + QP+ PF E+ +T++ P + Sbjct: 2089 VICDASTIAEAAAPSEPRFAHLDIQPIN--DAPFVRSPLAESSGATIFFEGRGPVFIAED 2146
Query: 263 LEVSPHTHTMSC*PAVLHNSPLSRSLLQPNELACDAVKSSHR-PYSADILVPLS 421 L V M + +P+ R ++QP LA + S YS + L+ LS Sbjct: 2147 LSVHDDDSLMLTEATAVLLNPVDRDVVQPELLAVNTTGSGLAFSYSVNGLLRLS 2200
>tr|B8LYK9|B8LYK9_9EURO Autophagy protein Atg13, putative OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_067950 PE=4 SV=1 Length = 974
Score = 33.9 bits (76), Expect = 4.1 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 7/87 (8%) Frame = +2
Query: 50 RKDFMAPHPLSLISGASTLAFVALTAGPKSRHTNGQPLEFLATPFTLHQSPETMSSTL-- 223 RKD ++P + + A+ ALT + R TN + +++ F LH+S + S L Sbjct: 579 RKDLLSPVKAAAVDAATRRTSAALTRFQRMRDTNAALSDSMSSSFHLHRSSSSSSRQLSS 638
Query: 224 ----YLGLLQPALLRPCLEVSPHT-HT 289 G P +SPHT HT Sbjct: 639 VPPMVAGTSISTASSPGKPISPHTPHT 665
>tr|Q8NAH9|Q8NAH9_HUMAN cDNA FLJ35331 fis, clone PROST2014659 OS=Homo sapiens PE=2 SV=1 Length = 577
Score = 33.5 bits (75), Expect = 5.4 Identities = 30/105 (28%), Positives = 40/105 (38%), Gaps = 5/105 (4%) Frame = +3
Query: 96 PAPSLLLHLQLAQNQDTPTASP*--SFWLRPSHSTKAQRLCPPLSTLACYSLRCYGPALK 269 P +LL L P +P L + + + R P L + S RC Sbjct: 333 PLHQILLLLSARYYSSPPDTTPPLRQMLLVSARCSSSPRDAPRLHRMLLLSTRCCSSPRD 392
Query: 270 FPHTHIQCLASLLCCITPLSPVACCNPTSSLVMP---SRAPTDHT 395 PH H L S CC SP A +P L++P S +P D T Sbjct: 393 APHLHRMLLVSTSCC---SSPPAAPHPHWMLLIPAGCSSSPPDPT 434
>tr|Q8DLX3|Q8DLX3_THEEB Tlr0353 protein OS=Thermosynechococcus elongatus (strain BP-1) GN=tlr0353 PE=4 SV=1 Length = 262
Score = 33.1 bits (74), Expect = 7.0 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 7/77 (9%) Frame = +1
Query: 67 STPPEFNLRSQHPRFCCTYSW-------PKIKTHQRPAPRVSGYALHTPPKPRDYVLHSL 225 +TP F L SQ P+ W P+ + R+ G+A+H+P P Y+ S Sbjct: 136 NTPVAFRL-SQRPQDRTLIDWIRTLDVYPEPDAYSGLPARIEGFAVHSPQLPETYLTLS- 193
Query: 226 PWLATACAVTALP*SFP 276 ++ T CA A P P Sbjct: 194 RFVMTCCAADAYPVGLP 210
>tr|Q8LME0|Q8LME0_ORYSJ Putative uncharacterized protein OJ1325D05.30 OS=Oryza sativa subsp. japonica GN=OJ1325D05.30 PE=4 SV=1 Length = 405
Score = 33.1 bits (74), Expect = 7.0 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = +1
Query: 133 KIKTHQRPAPRVSGYALHTPPKPRDYVLHSLP 228 K+ H+R PR LHT P+PR LH LP Sbjct: 199 KVLRHRRRRPRPPPSTLHTEPEPRHRQLHPLP 230
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