BP920269
Clone id YMU001_000135_A07
Library
Length 514
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000135_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTTTGGGCTTGAGGCCCCTTGCATTTCAGCCGAGCTTTGTGCCTTTGAAGGTGATGCAAT
AAAGGTATATATAAAGTCCACTTTTTTGTTGAGACTTTTGCAGGTTTCCCTCATGTTTTT
GCAATAACTTTGCGTGCTTGGTCGATTGGAGAAGAAGGTCAAGCCTTTTGTGCTCTCTTC
TTACATGCATGCACGCATTGGTTAATTTATGGGAAATTGTAGGTTCAGAGCTAGATTGCT
CTGTAGATTCGGTGGCCAGATATGAAGGACCCAATTGGGTTATTTGCTTTTGGGGGATTA
TTTGGAGATGCAATGTGCTGCCTTAACAAAGCACCACACCATAGGCTGCCCAAAAAATTA
GGGCAATGCCATGGTTGGCTGGTCGGAGTCCTTGGGTATGGAAACACCAAGACACATTTG
TATATGGTGTGTATTTCGAAAGTATTTGTACCATTGGATTTTGCGCTGCTGGTTTGAACA
GGAATTACATTGCAACTAAATTCGCGGCCGCGAA
■■Homology search results ■■ -
sp_hit_id Q7YS37
Definition sp|Q7YS37|G6PD_BOSIN Glucose-6-phosphate 1-dehydrogenase OS=Bos indicus
Align length 17
Score (bit) 30.8
E-value 3.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920269|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_A07.
(498 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7YS37|G6PD_BOSIN Glucose-6-phosphate 1-dehydrogenase OS=Bos ... 31 3.6
sp|P41391|RNA1_SCHPO Ran GTPase-activating protein 1 OS=Schizosa... 30 4.7
sp|Q32LF0|NPT3_BOVIN Sodium-dependent phosphate transport protei... 30 6.1

>sp|Q7YS37|G6PD_BOSIN Glucose-6-phosphate 1-dehydrogenase OS=Bos
indicus GN=G6PD PE=2 SV=3
Length = 515

Score = 30.8 bits (68), Expect = 3.6
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2

Query: 80 WTLYIPLLHHLQRHKAR 30
W ++ PLLHH++R KAR
Sbjct: 462 WRIFTPLLHHIEREKAR 478


>sp|P41391|RNA1_SCHPO Ran GTPase-activating protein 1
OS=Schizosaccharomyces pombe GN=rna1 PE=1 SV=1
Length = 386

Score = 30.4 bits (67), Expect = 4.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3

Query: 478 FKPAAQNPMVQILSKYTPYTNVSWCFHTQGLRP 380
F P AQ P++ LSK+TP ++ H GL P
Sbjct: 106 FGPTAQEPLIDFLSKHTPLEHL--YLHNNGLGP 136


>sp|Q32LF0|NPT3_BOVIN Sodium-dependent phosphate transport protein 3
OS=Bos taurus GN=SLC17A2 PE=2 SV=1
Length = 479

Score = 30.0 bits (66), Expect = 6.1
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +2

Query: 17 PCISAELCAFEGDAIKVYIKSTFLLRLLQVSLMFLQ*LCVLGRLEKKVKPFVLSSY 184
P I+A C G + ++ S LLRL+ V +F +L L PFV SSY
Sbjct: 319 PFIAAASCTILGGQLADFLLSRNLLRLITVRKLFSSLGLLLPSLCAVALPFVASSY 374


tr_hit_id Q11B82
Definition tr|Q11B82|Q11B82_MESSB Polar amino acid ABC transporter, inner membrane subunit OS=Mesorhizobium sp. (strain BNC1)
Align length 27
Score (bit) 35.4
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920269|Adiantum capillus-veneris mRNA, clone:
YMU001_000135_A07.
(498 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q11B82|Q11B82_MESSB Polar amino acid ABC transporter, inner m... 35 1.5
tr|B5DLU7|B5DLU7_DROPS GA27851 OS=Drosophila pseudoobscura pseud... 33 5.7
tr|B4H4I0|B4H4I0_DROPE GL18228 OS=Drosophila persimilis GN=GL182... 33 5.7

>tr|Q11B82|Q11B82_MESSB Polar amino acid ABC transporter, inner
membrane subunit OS=Mesorhizobium sp. (strain BNC1)
GN=Meso_3976 PE=3 SV=1
Length = 234

Score = 35.4 bits (80), Expect = 1.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3

Query: 393 WVWKHQDTFVYGVYFESICTIGFCAAG 473
W+W++ DT +YG + TIG CAAG
Sbjct: 8 WLWQNYDTLLYGALTTILLTIGACAAG 34


>tr|B5DLU7|B5DLU7_DROPS GA27851 OS=Drosophila pseudoobscura
pseudoobscura GN=GA27851 PE=4 SV=1
Length = 981

Score = 33.5 bits (75), Expect = 5.7
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -2

Query: 485 IPVQTSSAKSNGTNTFEIHTIYKCVLVFPYPRTPTSQPWHCPNFLGSLWCG 333
+ Q SSA S T+T +H + LV YP TPTS P F L G
Sbjct: 162 VSAQASSAPSASTSTESLHRLTPPNLVASYPATPTSWSSAPPQFPAGLGSG 212


>tr|B4H4I0|B4H4I0_DROPE GL18228 OS=Drosophila persimilis GN=GL18228
PE=4 SV=1
Length = 995

Score = 33.5 bits (75), Expect = 5.7
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -2

Query: 485 IPVQTSSAKSNGTNTFEIHTIYKCVLVFPYPRTPTSQPWHCPNFLGSLWCG 333
+ Q SSA S T+T +H + LV YP TPTS P F L G
Sbjct: 160 VSAQASSAPSASTSTESLHRLTPPNLVASYPATPTSWSSAPPQFPAGLGSG 210