BP920230
Clone id YMU001_000134_E09
Library
Length 276
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000134_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGAAATCTTCTCCATCAGCATTTGACACAGCATAATCTTGCATGTCCTCAAGCGCATTGG
CAGGCTGCAACTCCTCTATAGGGGCATCCATCCAGATCTCAGCTAACATTGTTGAGTATC
TCTCTGTTTGACCAACAAGAAAATCAAGATGCTTGTCCAGCGCTTTTTTCTTGATGCCTT
CAAGCACCATTTGGTGCTTATACATAATCAGCTTTTCAATTTTCGTCCAGAATTTCTTCA
CGTCCTTAGAAATATTGCTTGCAAGCCTACGCATGC
■■Homology search results ■■ -
sp_hit_id Q6ZRS2
Definition sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens
Align length 59
Score (bit) 76.3
E-value 5.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920230|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_E09.
(276 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE... 76 5e-14
sp|Q9NDJ2|DOM_DROME Helicase domino OS=Drosophila melanogaster G... 70 3e-12
sp|Q9NEL2|SSL1_CAEEL Helicase ssl-1 OS=Caenorhabditis elegans GN... 47 4e-05
sp|Q8CHI8|EP400_MOUSE E1A-binding protein p400 OS=Mus musculus G... 37 0.024
sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens G... 36 0.068
sp|Q5QW95|PURA_IDILO Adenylosuccinate synthetase OS=Idiomarina l... 31 1.7
sp|Q59KI4|INO80_CANAL Putative DNA helicase INO80 OS=Candida alb... 30 3.8
sp|A5IZ52|RPOC_MYCAP DNA-directed RNA polymerase subunit beta' O... 30 4.9
sp|Q9QW07|PLCB4_RAT 1-phosphatidylinositol-4,5-bisphosphate phos... 30 4.9
sp|Q15147|PLCB4_HUMAN 1-phosphatidylinositol-4,5-bisphosphate ph... 30 4.9
sp|A6X993|YJZ3_SCHPO Putative uncharacterized protein C338.03c O... 29 6.4
sp|P62135|RAD50_NANEQ DNA double-strand break repair rad50 ATPas... 29 8.4
sp|Q8C0Z1|ITFG3_MOUSE Protein ITFG3 OS=Mus musculus GN=Itfg3 PE=... 29 8.4

>sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1
SV=2
Length = 3230

Score = 76.3 bits (186), Expect = 5e-14
Identities = 32/59 (54%), Positives = 49/59 (83%)
Frame = -3

Query: 274 MRRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAE 98
+RR+AS ++KDV++FW+ +EK++ +K Q LE +KKALD HLDF+VGQTE+YS +L++
Sbjct: 191 LRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQ 249


>sp|Q9NDJ2|DOM_DROME Helicase domino OS=Drosophila melanogaster
GN=dom PE=1 SV=2
Length = 3198

Score = 70.5 bits (171), Expect = 3e-12
Identities = 30/59 (50%), Positives = 46/59 (77%)
Frame = -3

Query: 274 MRRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAE 98
++R+AS I+++VK FW+ +EKL+ YKHQ +E +K+ALD+HL F+V QTE++S L E
Sbjct: 574 LKRVASFIAREVKSFWSNVEKLVEYKHQTKIEEKRKQALDQHLSFIVDQTEKFSQQLVE 632


>sp|Q9NEL2|SSL1_CAEEL Helicase ssl-1 OS=Caenorhabditis elegans
GN=ssl-1 PE=2 SV=4
Length = 2395

Score = 46.6 bits (109), Expect = 4e-05
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = -3

Query: 271 RRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAE 98
R++ + I+K V+ FW+ +K++ + + VLE +KA +KHL F++GQ + S ++ E
Sbjct: 295 RKMCAGIAKMVRDFWSSTDKVVDIRAKEVLESRLRKARNKHLMFVIGQVDEMSNIVQE 352


>sp|Q8CHI8|EP400_MOUSE E1A-binding protein p400 OS=Mus musculus
GN=Ep400 PE=1 SV=2
Length = 3072

Score = 37.4 bits (85), Expect = 0.024
Identities = 15/40 (37%), Positives = 30/40 (75%)
Frame = -3

Query: 274 MRRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALD 155
+RR+A+ +++++ FW+ IE+++ K Q+ LE +KKAL+
Sbjct: 865 LRRIAATTAREIEYFWSNIEQVVEIKLQVELEEKRKKALN 904


>sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens
GN=EP400 PE=1 SV=3
Length = 3160

Score = 35.8 bits (81), Expect = 0.068
Identities = 14/40 (35%), Positives = 31/40 (77%)
Frame = -3

Query: 274 MRRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALD 155
+RR+A++ +++++ FW+ IE+++ K ++ LE +KKAL+
Sbjct: 866 LRRIAASTAREIECFWSNIEQVVEIKLRVELEEKRKKALN 905


>sp|Q5QW95|PURA_IDILO Adenylosuccinate synthetase OS=Idiomarina
loihiensis GN=purA PE=3 SV=1
Length = 432

Score = 31.2 bits (69), Expect = 1.7
Identities = 16/55 (29%), Positives = 33/55 (60%)
Frame = -3

Query: 244 DVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAEIWMDAP 80
D+K+F K+++L+ Y + ++E K A+D D ++ Q E ++ +L + +D P
Sbjct: 154 DMKRFGEKLKELVDYHNFSLVEYYKADAID--FDTVLKQCEEFAEVLKPMVIDVP 206


>sp|Q59KI4|INO80_CANAL Putative DNA helicase INO80 OS=Candida
albicans GN=INO80 PE=3 SV=1
Length = 1387

Score = 30.0 bits (66), Expect = 3.8
Identities = 22/80 (27%), Positives = 41/80 (51%)
Frame = -3

Query: 253 ISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAEIWMDAPIE 74
+ +D+KK K EK ++ K + E + K + L+FL+ QTE YS + + +
Sbjct: 511 LERDLKK---KHEKELLDKAKKEEEEREAKRQSRKLNFLITQTELYSHFIGK---KIKTD 564

Query: 73 ELQPANALEDMQDYAVSNAD 14
EL+ NA ++++ + D
Sbjct: 565 ELEGTNADDNLKSNTKEHLD 584


>sp|A5IZ52|RPOC_MYCAP DNA-directed RNA polymerase subunit beta'
OS=Mycoplasma agalactiae (strain PG2) GN=rpoC PE=3 SV=1
Length = 1478

Score = 29.6 bits (65), Expect = 4.9
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Frame = -3

Query: 259 SNISKDVKKFWTKIEKLIMYKHQMVLE--GIKKKALDKHLDFLVGQTERYSTMLAEI--W 92
+N +K V K +EKLI YK +VLE G+KK + +D + Y+ L E+
Sbjct: 135 ANSNKTVSK--GDLEKLIYYKSHIVLEDGGLKKLQKNAIID-ISDAAIIYADALEELKER 191

Query: 91 MDAPIEELQ-PANALEDMQDYAVSNADGEDF 2
+ EE + + AL +++ YAVS G+D+
Sbjct: 192 FEKDTEEYEIISEALAELESYAVSQT-GQDY 221


>sp|Q9QW07|PLCB4_RAT 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase beta-4 OS=Rattus norvegicus GN=Plcb4
PE=2 SV=2
Length = 1175

Score = 29.6 bits (65), Expect = 4.9
Identities = 22/74 (29%), Positives = 40/74 (54%)
Frame = -3

Query: 271 RRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAEIW 92
RR+ S + KKF + ++L M K ++ +KK L+ HL+FL Q E+ M +
Sbjct: 1105 RRVRELNSSNTKKFLEERKRLAM-KQSKEMDQLKKVQLE-HLEFLEKQNEQAKEMQQMVK 1162

Query: 91 MDAPIEELQPANAL 50
++A ++ +PA +
Sbjct: 1163 LEAEMDR-RPATVV 1175


>sp|Q15147|PLCB4_HUMAN 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase beta-4 OS=Homo sapiens GN=PLCB4 PE=1
SV=3
Length = 1175

Score = 29.6 bits (65), Expect = 4.9
Identities = 22/74 (29%), Positives = 40/74 (54%)
Frame = -3

Query: 271 RRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAEIW 92
RR+ S + KKF + ++L M K ++ +KK L+ HL+FL Q E+ M +
Sbjct: 1105 RRVRELNSSNTKKFLEERKRLAM-KQSKEMDQLKKVQLE-HLEFLEKQNEQAKEMQQMVK 1162

Query: 91 MDAPIEELQPANAL 50
++A ++ +PA +
Sbjct: 1163 LEAEMDR-RPATVV 1175


tr_hit_id A9S832
Definition tr|A9S832|A9S832_PHYPA SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) OS=Physcomitrella patens subsp. patens
Align length 59
Score (bit) 97.4
E-value 3.0e-19
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920230|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_E09.
(276 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9S832|A9S832_PHYPA SWR1 complex protein, SNF2 family DNA-dep... 97 3e-19
tr|Q6ZGY4|Q6ZGY4_ORYSJ Putative photoperiod independent early fl... 97 4e-19
tr|A9U2Y8|A9U2Y8_PHYPA SWR1 complex protein, SNF2 family DNA-dep... 92 2e-17
tr|Q9LTV5|Q9LTV5_ARATH Helicase-like protein OS=Arabidopsis thal... 91 3e-17
tr|Q7X9V2|Q7X9V2_ARATH Photoperiod independent early flowering1 ... 91 3e-17
tr|Q3U4M6|Q3U4M6_MOUSE Putative uncharacterized protein OS=Mus m... 76 7e-13
tr|Q6P4A2|Q6P4A2_HUMAN SRCAP protein (Fragment) OS=Homo sapiens ... 76 7e-13
tr|B0JZA6|B0JZA6_HUMAN SRCAP protein OS=Homo sapiens GN=SRCAP PE... 76 7e-13
tr|Q4SFE5|Q4SFE5_TETNG Chromosome 2 SCAF14604, whole genome shot... 73 6e-12
tr|B3MBX4|B3MBX4_DROAN GF12812 OS=Drosophila ananassae GN=GF1281... 73 6e-12
tr|B5E1L0|B5E1L0_DROPS GA24314 OS=Drosophila pseudoobscura pseud... 72 1e-11
tr|B4GI08|B4GI08_DROPE GL16840 OS=Drosophila persimilis GN=GL168... 72 1e-11
tr|B4P902|B4P902_DROYA Domino OS=Drosophila yakuba GN=Dyak\dom P... 72 1e-11
tr|B4MJU2|B4MJU2_DROWI GK20897 OS=Drosophila willistoni GN=GK208... 72 1e-11
tr|B4LLH7|B4LLH7_DROVI GJ20044 OS=Drosophila virilis GN=GJ20044 ... 72 1e-11
tr|B4KRF8|B4KRF8_DROMO GI19071 OS=Drosophila mojavensis GN=GI190... 72 1e-11
tr|B4J6Z7|B4J6Z7_DROGR GH20710 OS=Drosophila grimshawi GN=GH2071... 72 1e-11
tr|B3NJL6|B3NJL6_DROER GG22110 OS=Drosophila erecta GN=GG22110 P... 72 1e-11
tr|Q28EN0|Q28EN0_XENTR Novel protein (Fragment) OS=Xenopus tropi... 72 2e-11
tr|Q8MLW2|Q8MLW2_DROME Domino, isoform D OS=Drosophila melanogas... 70 4e-11
tr|B5RJR0|B5RJR0_DROME LP03212p (Fragment) OS=Drosophila melanog... 70 4e-11
tr|B5RJJ7|B5RJJ7_DROME LD35056p (Fragment) OS=Drosophila melanog... 70 4e-11
tr|B4QG22|B4QG22_DROSI GD11588 OS=Drosophila simulans GN=GD11588... 70 4e-11
tr|B4I7P3|B4I7P3_DROSE GM15831 OS=Drosophila sechellia GN=GM1583... 70 4e-11
tr|B7QDK0|B7QDK0_IXOSC E1A-binding protein p400, putative (Fragm... 69 9e-11
tr|B6NEC3|B6NEC3_BRAFL Putative uncharacterized protein OS=Branc... 68 2e-10
tr|B6MUW8|B6MUW8_BRAFL Putative uncharacterized protein OS=Branc... 68 2e-10
tr|B3S577|B3S577_TRIAD Putative uncharacterized protein OS=Trich... 67 3e-10
tr|Q17L58|Q17L58_AEDAE E1a binding protein P400 OS=Aedes aegypti... 65 2e-09
tr|B0WLJ6|B0WLJ6_CULQU E1a binding protein P400 OS=Culex quinque... 65 2e-09

>tr|A9S832|A9S832_PHYPA SWR1 complex protein, SNF2 family
DNA-dependent ATPase (Fragment) OS=Physcomitrella patens
subsp. patens GN=CHR1515 PE=4 SV=1
Length = 1780

Score = 97.4 bits (241), Expect = 3e-19
Identities = 45/59 (76%), Positives = 54/59 (91%)
Frame = -3

Query: 274 MRRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAE 98
MRR+ASNI+KDVKKFW K++KL+ YK Q+++E KKKALDKHLDFL+GQTERYSTMLAE
Sbjct: 76 MRRVASNIAKDVKKFWLKVDKLVSYKQQLLVEERKKKALDKHLDFLLGQTERYSTMLAE 134


>tr|Q6ZGY4|Q6ZGY4_ORYSJ Putative photoperiod independent early
flowering1 OS=Oryza sativa subsp. japonica
GN=OJ1743_B12.28 PE=4 SV=1
Length = 2021

Score = 97.1 bits (240), Expect = 4e-19
Identities = 47/67 (70%), Positives = 57/67 (85%)
Frame = -3

Query: 274 MRRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAEI 95
+R++A NISKDVKKFWTKIEKL+ YK+Q+ LE KKKALDK LDFL+GQTERYSTMLAE
Sbjct: 90 LRKVALNISKDVKKFWTKIEKLVFYKNQLELEERKKKALDKQLDFLLGQTERYSTMLAEN 149

Query: 94 WMDAPIE 74
+D ++
Sbjct: 150 LVDVRLQ 156


>tr|A9U2Y8|A9U2Y8_PHYPA SWR1 complex protein, SNF2 family
DNA-dependent ATPase (Fragment) OS=Physcomitrella patens
subsp. patens GN=CHR1545 PE=4 SV=1
Length = 1727

Score = 91.7 bits (226), Expect = 2e-17
Identities = 44/60 (73%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = -3

Query: 274 MRRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTE-RYSTMLAE 98
MR++ASNI+KDV+KFW K+EKL+ YK Q+++E KKKALDKHLDFL+GQTE RYSTMLAE
Sbjct: 63 MRKVASNIAKDVRKFWLKVEKLVSYKQQLLVEERKKKALDKHLDFLLGQTESRYSTMLAE 122


>tr|Q9LTV5|Q9LTV5_ARATH Helicase-like protein OS=Arabidopsis
thaliana PE=4 SV=1
Length = 2061

Score = 90.9 bits (224), Expect = 3e-17
Identities = 41/59 (69%), Positives = 52/59 (88%)
Frame = -3

Query: 274 MRRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAE 98
+R++A NISKD+KKFW K+EKL++YKHQ+V KKKA+DK L+FL+GQTERYSTMLAE
Sbjct: 102 LRKVALNISKDMKKFWMKVEKLVLYKHQLVRNEKKKKAMDKQLEFLLGQTERYSTMLAE 160


>tr|Q7X9V2|Q7X9V2_ARATH Photoperiod independent early flowering1
OS=Arabidopsis thaliana GN=PIE1 PE=1 SV=1
Length = 2055

Score = 90.9 bits (224), Expect = 3e-17
Identities = 41/59 (69%), Positives = 52/59 (88%)
Frame = -3

Query: 274 MRRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAE 98
+R++A NISKD+KKFW K+EKL++YKHQ+V KKKA+DK L+FL+GQTERYSTMLAE
Sbjct: 102 LRKVALNISKDMKKFWMKVEKLVLYKHQLVRNEKKKKAMDKQLEFLLGQTERYSTMLAE 160


>tr|Q3U4M6|Q3U4M6_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Srcap PE=2 SV=1
Length = 936

Score = 76.3 bits (186), Expect = 7e-13
Identities = 32/59 (54%), Positives = 49/59 (83%)
Frame = -3

Query: 274 MRRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAE 98
+RR+AS ++KDV++FW+ +EK++ +K Q LE +KKALD HLDF+VGQTE+YS +L++
Sbjct: 172 LRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQ 230


>tr|Q6P4A2|Q6P4A2_HUMAN SRCAP protein (Fragment) OS=Homo sapiens
GN=SRCAP PE=2 SV=1
Length = 584

Score = 76.3 bits (186), Expect = 7e-13
Identities = 32/59 (54%), Positives = 49/59 (83%)
Frame = -3

Query: 274 MRRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAE 98
+RR+AS ++KDV++FW+ +EK++ +K Q LE +KKALD HLDF+VGQTE+YS +L++
Sbjct: 191 LRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQ 249


>tr|B0JZA6|B0JZA6_HUMAN SRCAP protein OS=Homo sapiens GN=SRCAP PE=2
SV=1
Length = 3049

Score = 76.3 bits (186), Expect = 7e-13
Identities = 32/59 (54%), Positives = 49/59 (83%)
Frame = -3

Query: 274 MRRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAE 98
+RR+AS ++KDV++FW+ +EK++ +K Q LE +KKALD HLDF+VGQTE+YS +L++
Sbjct: 168 LRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQ 226


>tr|Q4SFE5|Q4SFE5_TETNG Chromosome 2 SCAF14604, whole genome shotgun
sequence. (Fragment) OS=Tetraodon nigroviridis
GN=GSTENG00019136001 PE=4 SV=1
Length = 4522

Score = 73.2 bits (178), Expect = 6e-12
Identities = 34/71 (47%), Positives = 51/71 (71%)
Frame = -3

Query: 274 MRRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAEI 95
+RR+AS+I+K+V+ FW+ +EK++ YK Q LE +KKALD LDF+VGQTE+YS +L++
Sbjct: 1634 IRRVASSIAKEVRAFWSNVEKVVQYKQQSRLEEKRKKALDLQLDFIVGQTEKYSDLLSKS 1693

Query: 94 WMDAPIEELQP 62
E+ P
Sbjct: 1694 LAPIKPSEIVP 1704


>tr|B3MBX4|B3MBX4_DROAN GF12812 OS=Drosophila ananassae GN=GF12812
PE=4 SV=1
Length = 3199

Score = 73.2 bits (178), Expect = 6e-12
Identities = 32/59 (54%), Positives = 47/59 (79%)
Frame = -3

Query: 274 MRRLASNISKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGQTERYSTMLAE 98
++R+AS I+K+VK FW+ +EKL+ YKHQ +E +K+ALD+HL F+V QTE++S LAE
Sbjct: 572 LKRVASFIAKEVKSFWSNVEKLVEYKHQTKIEEKRKQALDQHLSFIVDQTEKFSQQLAE 630