BP920220 |
Clone id |
YMU001_000134_D11 |
Library |
YMU01 |
Length |
532 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000134_D11. |
Accession |
BP920220 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3701Contig1 |
Sequence |
TTTAAAGAAAGGAAACTACACTGTTAAGTAAGTTCTTGGGACATAAAATAACCTCCAAAA AATTGTTGGCTTTTAGCCATAAGCTTCCAAAAGAGTACACCACAGCTACAGGAGTGCTAT CCAGAGAATCCTAAGGGGTGGCATAGGTCATAACTTCAAGCTTTCAATGAACCCAAAAAA ATATTGAGCTTGGATTTCTCTAGAAAAAAAATAAAGAGTGTCTCCAACAAACTGTTGGAA AGAGGCTGTTGAAAGCACTTCACCATAAGCATACAGCCATAAAAGAAGGGTTATCTGATC ACCAACACTCCAGCAATTGTGTACAAGGGGTTAGGAAAGAGCAACCTGCAAATGCTTGTG TTCAAAATAGGTTGAAGGGGAAGCCATCAACAGGGTGCACAAGGTATGTAACCAAGAGCG CCACAAACATGAGGGCATAGGCAATGCCAAGGTCAATTGTGGTTCCGTCACTGGTCGGGG AAGGAGCAGGAGCCATGGACGGCTGGCCGTGCACTGCGTTCTGCAGAAGGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M373 |
Definition |
sp|Q9M373|AGP20_ARATH Arabinogalactan peptide 20 OS=Arabidopsis thaliana |
Align length |
41 |
Score (bit) |
66.6 |
E-value |
7.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NL94 |
Definition |
tr|A9NL94|A9NL94_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
45 |
Score (bit) |
75.5 |
E-value |
2.0e-12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920220|Adiantum capillus-veneris mRNA, clone: YMU001_000134_D11. (532 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NL94|A9NL94_PICSI Putative uncharacterized protein OS=Picea... 75 2e-12 tr|B6TQ77|B6TQ77_MAIZE AGP16 OS=Zea mays PE=4 SV=1 67 6e-10 tr|B6SR56|B6SR56_MAIZE AGP16 OS=Zea mays PE=4 SV=1 67 6e-10 tr|B6SMF8|B6SMF8_MAIZE AGP16 OS=Zea mays PE=4 SV=1 67 6e-10 tr|A5BTA7|A5BTA7_VITVI Putative uncharacterized protein (Chromos... 66 1e-09 tr|Q6ETY5|Q6ETY5_ORYSJ Os02g0264800 protein OS=Oryza sativa subs... 65 2e-09 tr|A9PBL3|A9PBL3_POPTR Putative uncharacterized protein OS=Popul... 65 2e-09 tr|A2X375|A2X375_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09 tr|B8B358|B8B358_ORYSI Putative uncharacterized protein OS=Oryza... 64 4e-09 tr|Q94DB9|Q94DB9_ORYSJ cDNA clone:002-150-C11, full insert seque... 64 5e-09 tr|Q8S344|Q8S344_CAPAN Putative uncharacterized protein upa9 OS=... 64 5e-09 tr|A2WTE3|A2WTE3_ORYSI Putative uncharacterized protein OS=Oryza... 64 5e-09 tr|B6SPA0|B6SPA0_MAIZE AGP20 OS=Zea mays PE=4 SV=1 64 6e-09 tr|B4FIH4|B4FIH4_MAIZE Putative uncharacterized protein OS=Zea m... 64 6e-09 tr|Q6I5W4|Q6I5W4_ORYSJ Os05g0217000 protein OS=Oryza sativa subs... 63 8e-09 tr|A2Y1M8|A2Y1M8_ORYSI Putative uncharacterized protein OS=Oryza... 63 8e-09 tr|A5AM00|A5AM00_VITVI Putative uncharacterized protein (Chromos... 62 2e-08 tr|Q8L9T8|Q8L9T8_ARATH Putative uncharacterized protein (At5g241... 60 5e-08 tr|B6T2G3|B6T2G3_MAIZE AGP16 OS=Zea mays PE=4 SV=1 59 2e-07 tr|B4FD31|B4FD31_MAIZE Putative uncharacterized protein OS=Zea m... 59 2e-07 tr|A9PA79|A9PA79_POPTR Putative uncharacterized protein OS=Popul... 59 2e-07 tr|A9NR89|A9NR89_PICSI Putative uncharacterized protein OS=Picea... 54 4e-06 tr|A5B2M5|A5B2M5_VITVI Putative uncharacterized protein OS=Vitis... 54 4e-06 tr|B6T179|B6T179_MAIZE AGP16 OS=Zea mays PE=4 SV=1 50 7e-05 tr|Q6H8D2|Q6H8D2_ORYSJ Putative uncharacterized protein OJ1006_A... 46 0.001 tr|A2X2A7|A2X2A7_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002 tr|Q5ZD40|Q5ZD40_ORYSJ Putative uncharacterized protein P0710A02... 41 0.044 tr|A2WS21|A2WS21_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.044 tr|A3B0K5|A3B0K5_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.63 tr|A2Y115|A2Y115_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.63
>tr|A9NL94|A9NL94_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 73
Score = 75.5 bits (184), Expect = 2e-12 Identities = 32/45 (71%), Positives = 40/45 (88%) Frame = -1
Query: 499 SMAPAPSPTSDGTTIDLGIAYALMFVALLVTYLVHPVDGFPFNLF 365 + APAP+PTSDGT+ID GIAY LMF+AL +TYL+HP+D FP+NLF Sbjct: 29 AQAPAPAPTSDGTSIDQGIAYVLMFLALALTYLIHPLDAFPYNLF 73
>tr|B6TQ77|B6TQ77_MAIZE AGP16 OS=Zea mays PE=4 SV=1 Length = 76
Score = 67.0 bits (162), Expect = 6e-10 Identities = 31/46 (67%), Positives = 39/46 (84%), Gaps = 1/46 (2%) Frame = -1
Query: 499 SMAPAPSPTSDGTTIDLGIAYALMFVALLVTYLVHPVD-GFPFNLF 365 + APAP+PTSDGT+IDLGIAY LM VAL++TYL+HP+D P+ LF Sbjct: 31 AQAPAPAPTSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 76
>tr|B6SR56|B6SR56_MAIZE AGP16 OS=Zea mays PE=4 SV=1 Length = 73
Score = 67.0 bits (162), Expect = 6e-10 Identities = 31/46 (67%), Positives = 39/46 (84%), Gaps = 1/46 (2%) Frame = -1
Query: 499 SMAPAPSPTSDGTTIDLGIAYALMFVALLVTYLVHPVD-GFPFNLF 365 + APAP+PTSDGT+IDLGIAY LM VAL++TYL+HP+D P+ LF Sbjct: 28 AQAPAPAPTSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 73
>tr|B6SMF8|B6SMF8_MAIZE AGP16 OS=Zea mays PE=4 SV=1 Length = 75
Score = 67.0 bits (162), Expect = 6e-10 Identities = 31/46 (67%), Positives = 39/46 (84%), Gaps = 1/46 (2%) Frame = -1
Query: 499 SMAPAPSPTSDGTTIDLGIAYALMFVALLVTYLVHPVD-GFPFNLF 365 + APAP+PTSDGT+IDLGIAY LM VAL++TYL+HP+D P+ LF Sbjct: 30 AQAPAPAPTSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 75
>tr|A5BTA7|A5BTA7_VITVI Putative uncharacterized protein (Chromosome chr15 scaffold_40, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00026982001 PE=4 SV=1 Length = 75
Score = 65.9 bits (159), Expect = 1e-09 Identities = 29/45 (64%), Positives = 36/45 (80%) Frame = -1
Query: 499 SMAPAPSPTSDGTTIDLGIAYALMFVALLVTYLVHPVDGFPFNLF 365 S APAP+PTSDGT ID GIAY LM VAL++TYL+HP+D ++ F Sbjct: 31 SSAPAPAPTSDGTAIDQGIAYVLMLVALVLTYLIHPLDASSYSFF 75
>tr|Q6ETY5|Q6ETY5_ORYSJ Os02g0264800 protein OS=Oryza sativa subsp. japonica GN=P0006C08.11 PE=4 SV=1 Length = 73
Score = 65.1 bits (157), Expect = 2e-09 Identities = 30/46 (65%), Positives = 38/46 (82%), Gaps = 1/46 (2%) Frame = -1
Query: 499 SMAPAPSPTSDGTTIDLGIAYALMFVALLVTYLVHPVD-GFPFNLF 365 + APAP+P SDGT+IDLGIAY LM VAL++TYL+HP+D P+ LF Sbjct: 28 AQAPAPAPVSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 73
>tr|A9PBL3|A9PBL3_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 76
Score = 65.1 bits (157), Expect = 2e-09 Identities = 29/45 (64%), Positives = 36/45 (80%) Frame = -1
Query: 499 SMAPAPSPTSDGTTIDLGIAYALMFVALLVTYLVHPVDGFPFNLF 365 S APAP+PTSDGT+ID GIAY LM VAL++TYL+HP+D + F Sbjct: 32 SPAPAPAPTSDGTSIDQGIAYLLMLVALVLTYLIHPLDASSYTFF 76
>tr|A2X375|A2X375_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06656 PE=4 SV=1 Length = 73
Score = 65.1 bits (157), Expect = 2e-09 Identities = 30/46 (65%), Positives = 38/46 (82%), Gaps = 1/46 (2%) Frame = -1
Query: 499 SMAPAPSPTSDGTTIDLGIAYALMFVALLVTYLVHPVD-GFPFNLF 365 + APAP+P SDGT+IDLGIAY LM VAL++TYL+HP+D P+ LF Sbjct: 28 AQAPAPAPVSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 73
>tr|B8B358|B8B358_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23127 PE=4 SV=1 Length = 77
Score = 64.3 bits (155), Expect = 4e-09 Identities = 29/47 (61%), Positives = 38/47 (80%), Gaps = 1/47 (2%) Frame = -1
Query: 502 PSMAPAPSPTSDGTTIDLGIAYALMFVALLVTYLVHPVD-GFPFNLF 365 P+ PAP+P+SDGT+ID GIAY LM VAL++TYL+HP+D P+ LF Sbjct: 31 PAQPPAPAPSSDGTSIDQGIAYVLMLVALVLTYLIHPLDASSPYKLF 77
>tr|Q94DB9|Q94DB9_ORYSJ cDNA clone:002-150-C11, full insert sequence OS=Oryza sativa subsp. japonica GN=P0694A04.20 PE=4 SV=1 Length = 69
Score = 63.9 bits (154), Expect = 5e-09 Identities = 27/38 (71%), Positives = 34/38 (89%) Frame = -1
Query: 499 SMAPAPSPTSDGTTIDLGIAYALMFVALLVTYLVHPVD 386 + APAP+PTSDGT++D GIAY LMFVAL +TYL+HP+D Sbjct: 24 AQAPAPAPTSDGTSVDQGIAYVLMFVALALTYLIHPLD 61
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