BP920181
Clone id YMU001_000134_A05
Library
Length 379
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000134_A05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CCCCCTCAAGCCTACCCTTATCCACCTCAGGGGATATCCTCCCCAGCACGGATATGGTGC
TCCGGCTCCTGGTTCTTATCCACCTTACTAAGGGGGCCTAGTGCTATCTCTCCCATGTAT
ATTCGTCTTTGTGCTATAGACACAAGGTAAGTTCTTTCCAAGTCTCCTCCTTTGCACAAG
ATAAATTCTTTGCAAGTCCTTCTAGTTGAAACTGTTATCTGGTGTAGCGGCCATCCTGCG
ACCCCTTTCATCGTGCCACTGATTTAATGCACCTATTGATTTTAACCACACCGGCTTTTT
TTGTCATTTGATCACAAAGCATTTCATTTGTAGGAAATTTGTAATCCTCTCTTGCCTGAT
ACATATTCTTAAGTGAAGT
■■Homology search results ■■ -
sp_hit_id Q8C0S4
Definition sp|Q8C0S4|TT21A_MOUSE Tetratricopeptide repeat protein 21A OS=Mus musculus
Align length 56
Score (bit) 29.3
E-value 6.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920181|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_A05.
(379 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8C0S4|TT21A_MOUSE Tetratricopeptide repeat protein 21A OS=Mu... 29 6.3
sp|Q32E44|MUKB_SHIDS Chromosome partition protein mukB OS=Shigel... 29 8.2
sp|Q83FX9|COAD_TROWT Phosphopantetheine adenylyltransferase OS=T... 29 8.2
sp|Q83I84|COAD_TROW8 Phosphopantetheine adenylyltransferase OS=T... 29 8.2

>sp|Q8C0S4|TT21A_MOUSE Tetratricopeptide repeat protein 21A OS=Mus
musculus GN=Ttc21a PE=1 SV=2
Length = 1314

Score = 29.3 bits (64), Expect = 6.3
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = +3

Query: 117 VYSSLCYRHKVSSFQVSSFAQDKFFASPSS*NCYLV*RPSCDPFHRATDLMHLLIL 284
V S LC RH+V VS F + F A+PS C LV AT+L +L IL
Sbjct: 296 VISRLCGRHQVVHRLVSGFLERIFMATPS---CALV----------ATELGYLFIL 338


>sp|Q32E44|MUKB_SHIDS Chromosome partition protein mukB OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=mukB PE=3 SV=1
Length = 1483

Score = 28.9 bits (63), Expect = 8.2
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -2

Query: 372 LRICIRQERITNFLQMKCFVIK*QKKPVWLKSIGALNQWHDERGRRMAATPD 217
+ +C QE++ + +Q Q+ PVWL + +LNQ ++ G +++ D
Sbjct: 581 MALCQEQEQLQSRIQSLM-----QRAPVWLAAQNSLNQLSEQCGEEFSSSQD 627


>sp|Q83FX9|COAD_TROWT Phosphopantetheine adenylyltransferase
OS=Tropheryma whipplei (strain Twist) GN=coaD PE=3 SV=1
Length = 176

Score = 28.9 bits (63), Expect = 8.2
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1

Query: 358 QAREDYKFPTNEMLCDQMTKKAG-VVKINRCIKSV 257
QA E+Y FP +E CD + + G +VKI+R K +
Sbjct: 58 QALEEYGFPRSEPKCDSESDRNGPIVKIHRFEKGL 92


>sp|Q83I84|COAD_TROW8 Phosphopantetheine adenylyltransferase
OS=Tropheryma whipplei (strain TW08/27) GN=coaD PE=3
SV=1
Length = 176

Score = 28.9 bits (63), Expect = 8.2
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1

Query: 358 QAREDYKFPTNEMLCDQMTKKAG-VVKINRCIKSV 257
QA E+Y FP +E CD + + G +VKI+R K +
Sbjct: 58 QALEEYGFPRSEPKCDSESDRNGPIVKIHRFEKGL 92


tr_hit_id Q7SD93
Definition tr|Q7SD93|Q7SD93_NEUCR Predicted protein OS=Neurospora crassa
Align length 65
Score (bit) 36.2
E-value 0.82
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920181|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_A05.
(379 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7SD93|Q7SD93_NEUCR Predicted protein OS=Neurospora crassa GN... 36 0.82

>tr|Q7SD93|Q7SD93_NEUCR Predicted protein OS=Neurospora crassa
GN=NCU00846 PE=4 SV=1
Length = 814

Score = 36.2 bits (82), Expect = 0.82
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1

Query: 1 PPQAYPYPPQGISSPARIWCSGSWFLSTLLRGPSAISPMYIRLCAIDTR*VLSKSP-PLH 177
P YP PP G+ P R W +W+ T+L P A SP Y+ A V++ SP P H
Sbjct: 232 PDAEYPVPP-GLGQPDRKWTQQTWYRDTVLLIPQAQSP-YVLSSA-----VVAPSPWPDH 284

Query: 178 KINSL 192
+I ++
Sbjct: 285 QIQNI 289