BP920175 |
Clone id |
YMU001_000133_H09 |
Library |
YMU01 |
Length |
490 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000133_H09. |
Accession |
BP920175 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATTCAAATGCAACTTTGCTATACAAAATTAGTGAAACCTGAGCATTCGCACAATGCCAAA AGAGAAGCTCTCTACATGTATCCCGGGTTCTCAGTACTAACAAAAATTTGCAAGAGATTG TGGTTGTACGATGGTTAAACTAGCACAAATATCCCATAAAGACCTCTATCAATCATAGTG AAGCAAGGTTGCAGAACCACAAGCAAACAATGTTGCCACCTCAGAGATGGCATCCGGTGG TAGGGAAGATAGCTCAGAACTTTGGCAAGAACATTAAACCTAACCCATCTCTGCCTCAGA CTCCAGCAGCCAACTGTCTGCATAGAGATTTGATATAAGAACATATGCAGTACCATTTGC AGGTTGCAAACCCACTGCATGGTCGAACACATAATCTGCCAGCTCTCGATCACCATGTCT ACAGCATGAACTGAGTACAGACATCAAAGCGTCATTATCAGCCTCCATTGGCATCTTACT CAACACATCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FHR3 |
Definition |
sp|Q9FHR3|PP403_ARATH Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis thaliana |
Align length |
62 |
Score (bit) |
51.6 |
E-value |
2.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P5J1 |
Definition |
tr|A7P5J1|A7P5J1_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
58 |
Score (bit) |
54.7 |
E-value |
2.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920175|Adiantum capillus-veneris mRNA, clone: YMU001_000133_H09. (490 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P5J1|A7P5J1_VITVI Chromosome chr4 scaffold_6, whole genome ... 55 2e-06 tr|B8LLJ0|B8LLJ0_PICSI Putative uncharacterized protein OS=Picea... 54 4e-06 tr|A7P5J4|A7P5J4_VITVI Chromosome chr4 scaffold_6, whole genome ... 53 7e-06 tr|Q8LQE8|Q8LQE8_ORYSJ Pentatricopeptide (PPR) repeat-containing... 52 1e-05 tr|Q7F2F8|Q7F2F8_ORYSJ P0402A09.8 protein (P0455C04.2 protein) O... 52 1e-05 tr|Q655L5|Q655L5_ORYSJ Putative uncharacterized protein P0672D08... 52 1e-05 tr|B8ACR8|B8ACR8_ORYSI Putative uncharacterized protein OS=Oryza... 52 1e-05 tr|A7Q087|A7Q087_VITVI Chromosome chr7 scaffold_42, whole genome... 52 1e-05 tr|A3B7R9|A3B7R9_ORYSJ Putative uncharacterized protein OS=Oryza... 52 1e-05 tr|A2ZN87|A2ZN87_ORYSJ Putative uncharacterized protein OS=Oryza... 52 1e-05 tr|A2WWE8|A2WWE8_ORYSI Putative uncharacterized protein OS=Oryza... 52 1e-05 tr|Q2HSJ6|Q2HSJ6_MEDTR Tetratricopeptide-like helical OS=Medicag... 51 3e-05 tr|Q2HSI6|Q2HSI6_MEDTR Tetratricopeptide-like helical OS=Medicag... 51 3e-05 tr|Q9FU66|Q9FU66_ORYSJ Putative uncharacterized protein P0013F10... 50 4e-05 tr|A7PZG2|A7PZG2_VITVI Chromosome chr15 scaffold_40, whole genom... 50 6e-05 tr|A7PD58|A7PD58_VITVI Chromosome chr17 scaffold_12, whole genom... 50 6e-05 tr|A5C4V9|A5C4V9_VITVI Putative uncharacterized protein OS=Vitis... 50 6e-05 tr|A7PWC5|A7PWC5_VITVI Chromosome chr8 scaffold_34, whole genome... 50 7e-05 tr|Q3LAF9|Q3LAF9_HORVU Pentatricopeptide repeat-containing prote... 49 1e-04 tr|A7QV49|A7QV49_VITVI Chromosome undetermined scaffold_185, who... 49 1e-04 tr|A7PNA8|A7PNA8_VITVI Chromosome chr1 scaffold_22, whole genome... 49 1e-04 tr|A7PEX5|A7PEX5_VITVI Chromosome chr11 scaffold_13, whole genom... 49 1e-04 tr|A7NYW1|A7NYW1_VITVI Chromosome chr6 scaffold_3, whole genome ... 49 1e-04 tr|A5BDU0|A5BDU0_VITVI Putative uncharacterized protein OS=Vitis... 49 1e-04 tr|A5AVY8|A5AVY8_VITVI Putative uncharacterized protein OS=Vitis... 49 1e-04 tr|Q0J6X9|Q0J6X9_ORYSJ Os08g0249600 protein OS=Oryza sativa subs... 48 2e-04 tr|B8B8R2|B8B8R2_ORYSI Putative uncharacterized protein OS=Oryza... 48 2e-04 tr|A3BR65|A3BR65_ORYSJ Putative uncharacterized protein OS=Oryza... 48 2e-04 tr|Q60EX3|Q60EX3_ORYSJ Os05g0370000 protein OS=Oryza sativa subs... 48 3e-04 tr|A7QV19|A7QV19_VITVI Chromosome undetermined scaffold_183, who... 48 3e-04
>tr|A7P5J1|A7P5J1_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032554001 PE=4 SV=1 Length = 866
Score = 54.7 bits (130), Expect = 2e-06 Identities = 26/58 (44%), Positives = 39/58 (67%) Frame = -2
Query: 489 DVLSKMPMEADNDALMSVLSSCCRHGDRELADYVFDHAVGLQPANGTAYVLISNLYAD 316 +++ KMPM+ D+ S+LSSC H + E+A +H + L+PA+ YVL+SNLYAD Sbjct: 732 ELIKKMPMKPDSAIWGSLLSSCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYAD 789
>tr|B8LLJ0|B8LLJ0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 644
Score = 53.9 bits (128), Expect = 4e-06 Identities = 24/57 (42%), Positives = 37/57 (64%) Frame = -2
Query: 489 DVLSKMPMEADNDALMSVLSSCCRHGDRELADYVFDHAVGLQPANGTAYVLISNLYA 319 D+++KMP++ D D S+LS+C H + +L + V H + L P N YVL+SN+YA Sbjct: 546 DLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYA 602
>tr|A7P5J4|A7P5J4_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032558001 PE=4 SV=1 Length = 537
Score = 53.1 bits (126), Expect = 7e-06 Identities = 25/58 (43%), Positives = 39/58 (67%) Frame = -2
Query: 489 DVLSKMPMEADNDALMSVLSSCCRHGDRELADYVFDHAVGLQPANGTAYVLISNLYAD 316 +++ KMP + D+ S+LSSC HG+ ++A +H + L+PA+ YVL+SNLYAD Sbjct: 407 ELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYAD 464
>tr|Q8LQE8|Q8LQE8_ORYSJ Pentatricopeptide (PPR) repeat-containing protein-like (Os01g0819800 protein) OS=Oryza sativa subsp. japonica GN=OJ1529_G03.20 PE=4 SV=1 Length = 646
Score = 52.0 bits (123), Expect = 1e-05 Identities = 24/68 (35%), Positives = 43/68 (63%) Frame = -2
Query: 489 DVLSKMPMEADNDALMSVLSSCCRHGDRELADYVFDHAVGLQPANGTAYVLISNLYADSW 310 ++++ MPM AD ++L +C H + E+ + F+ V L+PAN YVL++N+YAD+ Sbjct: 431 ELIASMPMAADGAVWGALLGACKIHKNVEMGEEAFERVVSLEPANVGYYVLMANIYADAG 490
Query: 309 LLESEAEM 286 L+ A++ Sbjct: 491 QLDGVAKV 498
>tr|Q7F2F8|Q7F2F8_ORYSJ P0402A09.8 protein (P0455C04.2 protein) OS=Oryza sativa subsp. japonica GN=P0402A09.8 PE=4 SV=1 Length = 1122
Score = 52.0 bits (123), Expect = 1e-05 Identities = 26/65 (40%), Positives = 39/65 (60%) Frame = -2
Query: 486 VLSKMPMEADNDALMSVLSSCCRHGDRELADYVFDHAVGLQPANGTAYVLISNLYADSWL 307 +L +MP +AD S+L SC HG++ELA D G++P + T YV++SN+YA + Sbjct: 597 MLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQ 656
Query: 306 LESEA 292 E A Sbjct: 657 WEDAA 661
>tr|Q655L5|Q655L5_ORYSJ Putative uncharacterized protein P0672D08.16 OS=Oryza sativa subsp. japonica GN=P0672D08.16 PE=4 SV=1 Length = 810
Score = 52.0 bits (123), Expect = 1e-05 Identities = 26/65 (40%), Positives = 39/65 (60%) Frame = -2
Query: 486 VLSKMPMEADNDALMSVLSSCCRHGDRELADYVFDHAVGLQPANGTAYVLISNLYADSWL 307 +L +MP +AD S+L SC HG++ELA D G++P + T YV++SN+YA + Sbjct: 597 MLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQ 656
Query: 306 LESEA 292 E A Sbjct: 657 WEDAA 661
>tr|B8ACR8|B8ACR8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00012 PE=4 SV=1 Length = 810
Score = 52.0 bits (123), Expect = 1e-05 Identities = 26/65 (40%), Positives = 39/65 (60%) Frame = -2
Query: 486 VLSKMPMEADNDALMSVLSSCCRHGDRELADYVFDHAVGLQPANGTAYVLISNLYADSWL 307 +L +MP +AD S+L SC HG++ELA D G++P + T YV++SN+YA + Sbjct: 597 MLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQ 656
Query: 306 LESEA 292 E A Sbjct: 657 WEDAA 661
>tr|A7Q087|A7Q087_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027955001 PE=4 SV=1 Length = 421
Score = 52.0 bits (123), Expect = 1e-05 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = -2
Query: 489 DVLSKMPMEADNDALMSVLSSCCRHGDRELADYVFDHAVGLQPANGTAYVLISNLYAD 316 +V+++MP E + + L+ C HGD EL+++ V L+P NG YVL+SN+YA+ Sbjct: 323 EVMTRMPFEPNKVMWGAFLAGCRAHGDLELSEFAARKLVELEPGNGAYYVLLSNIYAE 380
>tr|A3B7R9|A3B7R9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019091 PE=4 SV=1 Length = 602
Score = 52.0 bits (123), Expect = 1e-05 Identities = 24/68 (35%), Positives = 43/68 (63%) Frame = -2
Query: 489 DVLSKMPMEADNDALMSVLSSCCRHGDRELADYVFDHAVGLQPANGTAYVLISNLYADSW 310 ++++ MPM AD ++L +C H + E+ + F+ V L+PAN YVL++N+YAD+ Sbjct: 387 ELIASMPMAADGAVWGALLGACKIHKNVEMGEEAFERVVSLEPANVGYYVLMANIYADAG 446
Query: 309 LLESEAEM 286 L+ A++ Sbjct: 447 QLDGVAKV 454
>tr|A2ZN87|A2ZN87_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_000009 PE=4 SV=1 Length = 1372
Score = 52.0 bits (123), Expect = 1e-05 Identities = 26/65 (40%), Positives = 39/65 (60%) Frame = -2
Query: 486 VLSKMPMEADNDALMSVLSSCCRHGDRELADYVFDHAVGLQPANGTAYVLISNLYADSWL 307 +L +MP +AD S+L SC HG++ELA D G++P + T YV++SN+YA + Sbjct: 820 MLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQ 879
Query: 306 LESEA 292 E A Sbjct: 880 WEDAA 884
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