BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920173|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_H07.
         (437 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LSU0|PSA3_ORYSJ Proteasome subunit alpha type-3 OS=Oryza sa...    30   3.4  
sp|Q9P2E9|RRBP1_HUMAN Ribosome-binding protein 1 OS=Homo sapiens...    29   7.5  
sp|P96693|MHQO_BACSU Putative ring-cleaving dioxygenase mhqO OS=...    29   7.5  
sp|Q9HM89|EF1A_HALSA Elongation factor 1-alpha OS=Halobacterium ...    29   7.5  
sp|B0R8C3|EF1A_HALS3 Elongation factor 1-alpha OS=Halobacterium ...    29   7.5  
sp|Q8NAJ2|CI106_HUMAN Putative uncharacterized protein C9orf106 ...    29   9.8  

>sp|Q9LSU0|PSA3_ORYSJ Proteasome subunit alpha type-3 OS=Oryza
           sativa subsp. japonica GN=PAG1 PE=2 SV=1
          Length = 249

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
 Frame = +2

Query: 200 LSMNEPSALK------ALSRHYPQARIEMAKLHLWHLIVGIENARSRRVQITRLFFGIYN 361
           L M EPS +       AL +    A+ E+ KL L  L       R   V++ ++ +G+++
Sbjct: 148 LYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSEL-----TCREGIVEVAKIIYGVHD 202

Query: 362 EARPSCIGLSTGWL 403
           EA+     L   W+
Sbjct: 203 EAKDKAFELELSWI 216


>sp|Q9P2E9|RRBP1_HUMAN Ribosome-binding protein 1 OS=Homo sapiens
           GN=RRBP1 PE=1 SV=4
          Length = 1410

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -1

Query: 305 RSQR*GARGEVLPFQSGPGDSVCLRP*ELKVHS*RGVRADGNADMIKHTKGRPGRG 138
           RS   G +GE  P Q    DSV  +  +++  + +G +A+G+    K  +G P +G
Sbjct: 532 RSPNQGKKGEGAPIQGKKADSVANQGTKVEGITNQGKKAEGSPSEGKKAEGSPNQG 587


>sp|P96693|MHQO_BACSU Putative ring-cleaving dioxygenase mhqO
           OS=Bacillus subtilis GN=mhqO PE=2 SV=1
          Length = 312

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -3

Query: 378 QEGLASLYIPKNSLVIWTRRDRAFSIPTIRCQR 280
           Q G+ S  +PK ++  W +R   F++P  + +R
Sbjct: 78  QVGVTSYVVPKGAMAFWEKRLEKFNVPYTKIER 110


>sp|Q9HM89|EF1A_HALSA Elongation factor 1-alpha OS=Halobacterium
           salinarium GN=tuf PE=3 SV=1
          Length = 421

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -2

Query: 418 LDKVLEPACGKTNAGGPCFIVYPKEQPCDLDPARSSIFDPNDKVPEV 278
           +DK ++PA G+T    P FI         + P +    +P+ ++PE+
Sbjct: 352 IDKKMDPASGETQEENPDFIQSGDAAVVTVRPQKPLSLEPSSEIPEL 398


>sp|B0R8C3|EF1A_HALS3 Elongation factor 1-alpha OS=Halobacterium
           salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tuf PE=3
           SV=1
          Length = 421

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -2

Query: 418 LDKVLEPACGKTNAGGPCFIVYPKEQPCDLDPARSSIFDPNDKVPEV 278
           +DK ++PA G+T    P FI         + P +    +P+ ++PE+
Sbjct: 352 IDKKMDPASGETQEENPDFIQSGDAAVVTVRPQKPLSLEPSSEIPEL 398


>sp|Q8NAJ2|CI106_HUMAN Putative uncharacterized protein C9orf106
           OS=Homo sapiens GN=C9orf106 PE=2 SV=1
          Length = 232

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
 Frame = +1

Query: 136 WPLPGLPFVCLIMSALPSALTPLYE*TFSSQGLKQTLSPGPD*NG----KTSPLAP--YR 297
           WPLPG PF  L + ALP +         SS G K +L P P  +     +T  L P    
Sbjct: 38  WPLPGTPF--LPIRALPFSA--------SSSG-KSSLVPSPSSSAHSGFRTPCLGPDCLL 86

Query: 298 WDRKCSISPGPNHKAV 345
             + C +  G NH AV
Sbjct: 87  CTQGCELHEGRNHMAV 102

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920173|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_H07.
         (437 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T7B2|A9T7B2_PHYPA Predicted protein OS=Physcomitrella paten...    55   2e-06
tr|Q5ZM40|Q5ZM40_CHICK Putative uncharacterized protein OS=Gallu...    34   3.2  
tr|Q11KF9|Q11KF9_MESSB FAD linked oxidase-like OS=Mesorhizobium ...    33   9.2  
tr|B6Q8P5|B6Q8P5_PENMA Putative uncharacterized protein OS=Penic...    33   9.2  

>tr|A9T7B2|A9T7B2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_89037 PE=4 SV=1
          Length = 546

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = -2

Query: 436 VFINYGLDKVLE-PACGKTNAGGPCFIVYPKEQPCDLDPARSSIFDPNDKVPEVKFCHFN 260
           VF+ +G +   +   C ++N  GPC+I  P  Q C LDP  + I DPN  VPE++ C   
Sbjct: 479 VFVRWGFEDYTQYNGCERSNLAGPCYIDTPHGQECPLDPPGTRIGDPNAAVPEIQHCRNQ 538

Query: 259 PGLGI 245
            G+G+
Sbjct: 539 WGVGV 543


>tr|Q5ZM40|Q5ZM40_CHICK Putative uncharacterized protein OS=Gallus
           gallus GN=RCJMB04_3d17 PE=2 SV=1
          Length = 468

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = +1

Query: 310 CSISPGPNHKAVLWDIQ*SKALLHWSFHRLAPVLC 414
           C  S G NH   LWDI+ +K L H+  HR A V C
Sbjct: 200 CIASAGSNHTVKLWDIRMNKLLQHYKVHR-AEVNC 233


>tr|Q11KF9|Q11KF9_MESSB FAD linked oxidase-like OS=Mesorhizobium sp.
           (strain BNC1) GN=Meso_0716 PE=4 SV=1
          Length = 476

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 212 EPSALKALSRHYPQARIEMAKLHLWHLIVGIENARS 319
           E + L  + RH PQAR  +A+ H W+ ++ I + RS
Sbjct: 263 EKTPLDFVLRHIPQARAPLAESHPWNALIEISSGRS 298


>tr|B6Q8P5|B6Q8P5_PENMA Putative uncharacterized protein
           OS=Penicillium marneffei ATCC 18224 GN=PMAA_069420 PE=4
           SV=1
          Length = 972

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +1

Query: 166 LIMSALPSALTPLYE*TFSSQGLKQTLSPGPD*NGKTSPLAPYRWDRKCSISPGPNHKAV 345
           ++  ALPS   P Y     S G++    P P+ N +  PLAP   DR+ ++ P P     
Sbjct: 255 VLSPALPSNY-PSYSNNMQS-GVQSKNHPAPNQNERGVPLAPIVTDRRQAVEPSP----Y 308

Query: 346 LWDIQ*S-KALLH 381
            WD Q S  AL+H
Sbjct: 309 SWDSQTSTNALMH 321