BP920171
Clone id YMU001_000133_H05
Library
Length 509
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000133_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACACATGCAGGTGCGTGGTAAAAGGTACTTTTTTGATCTGGTCGTTCTCACGACTTCTTC
ATTTAGAGAGACCCGAGATGTTTAGTTTGAAGAACTCTAGTCAGGCTCTCATGATTTGAA
GTACAGACTTAAACCAGACATATACACAATTTGGGTATGCAAAGATGCTCACGTTAGCCA
TCTGTTTCCATTATGCACAGATGTCGAACATTGGAGACTGTGTTATCAGGCTTTTTTTGT
ATTGTGTACAACAGTCAAGAAGGCTCAGCACCTGTAGGTAGTTGGAAACTTGGAAGAGAC
TTCAGTGTAAGGTTACTCTCAAATAACATAAAACTTGCCTTTCCTTCTTCCTTGTACACA
GAGACACACACATGTGCACAAGGCTCGTTATGAATGGGTTTAATCTTCCACTACCTAGTA
CCTAGTCGGGTATTTTGTGGTCGGATTTTTTCTCCCAACAATGGCCTTCAGGCAATCTAT
AGGCATGCGAGGACATATGGCGAGCATTA
■■Homology search results ■■ -
sp_hit_id Q5RBV9
Definition sp|Q5RBV9|YN012_PONAB RING finger protein ENSP00000382794 homolog OS=Pongo abelii
Align length 61
Score (bit) 29.6
E-value 8.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920171|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_H05.
(509 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5RBV9|YN012_PONAB RING finger protein ENSP00000382794 homolo... 30 8.6

>sp|Q5RBV9|YN012_PONAB RING finger protein ENSP00000382794 homolog
OS=Pongo abelii PE=2 SV=1
Length = 300

Score = 29.6 bits (65), Expect = 8.6
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = -1

Query: 443 RPQNTRLGTR*WKIKPIHNEPCAHVCVSVYKEEGKASFMLFESNLTLKSLPSFQLPTGAE 264
RP + G + +P N H V +F ES TL+SLPSFQLP
Sbjct: 225 RPSSASSGQGIFSFRPSPNGHSGHTRVLTPN-----NFAQRESRTTLESLPSFQLPVLQT 279

Query: 263 P 261
P
Sbjct: 280 P 280


tr_hit_id A4X3S7
Definition tr|A4X3S7|A4X3S7_SALTO YD repeat protein OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
Align length 69
Score (bit) 34.7
E-value 2.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920171|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_H05.
(509 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4X3S7|A4X3S7_SALTO YD repeat protein OS=Salinispora tropica ... 35 2.7
tr|A5B6X8|A5B6X8_VITVI Putative uncharacterized protein (Chromos... 33 8.0

>tr|A4X3S7|A4X3S7_SALTO YD repeat protein OS=Salinispora tropica
(strain ATCC BAA-916 / DSM 44818 / CNB-440)
GN=Strop_1054 PE=3 SV=1
Length = 2286

Score = 34.7 bits (78), Expect = 2.7
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = -1

Query: 464 PLLGEKIRPQNTRLGTR*WKIKPIHNEPCAHVCVSVYKEEGKASFMLFESNLTLKSLPSF 285
PL P + R G W+IK +H E V VS + + + + T + +PS+
Sbjct: 659 PLPNRVDGPDDGRTGLYRWRIKTVHTESGGDVIVSYSDADCTRTTLPNPATNTTRCMPSY 718

Query: 284 QLPTGAEPS 258
P G EP+
Sbjct: 719 YSPDGDEPT 727


>tr|A5B6X8|A5B6X8_VITVI Putative uncharacterized protein (Chromosome
chr18 scaffold_1, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00014870001 PE=4 SV=1
Length = 662

Score = 33.1 bits (74), Expect = 8.0
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1

Query: 178 PSVSIMHRCRTLETVLSGFFCIVYNSQEGSAPVGSWKLGRDFSVRLLSNNIKLAFP 345
PS+S +HR RTL+ YN+ G P+ KL R + +RL SN P
Sbjct: 150 PSISSLHRLRTLD--------FSYNNLTGPLPIWLTKLDRLYYLRLESNRFNGTIP 197