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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920165
Clone id YMU001_000133_G11
Library
Length 301
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000133_G11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TCTCCCTTTCCAAAGCCCATATCACTCCCTCCACTCTTACTGGCATTTTCAGAAGTTGAC
TGTATCCACCTTGCAAGACTGTACATTGAGATTCTTCTCATCCTTACTGGGAACAGCTTT
CTCACTTCCTGAAGAAACATCCGAACAGGTTGATGAATCTGGAGCATCCTCTTCATCATT
AGAATCGCCTTCCATGCGCTCAGCAAAATCTAGTTCCAAGTCATTGTTCTCAATCATCAG
ATCAGCATCGGTGCCATGGGTATCTGGTACTTGCTGGCGATAATTACCCCCTTCGGTCTC
T
■■Homology search results ■■ -
sp_hit_id A1RSR6
Definition sp|A1RSR6|SYP_PYRIL Prolyl-tRNA synthetase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189)
Align length 44
Score (bit) 30.4
E-value 2.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920165|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_G11.
         (301 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A1RSR6|SYP_PYRIL Prolyl-tRNA synthetase OS=Pyrobaculum island...    30   2.9  
sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5 ...    27   5.7  
sp|Q05591|CBIJ_SALTY Cobalt-precorrin-6A reductase OS=Salmonella...    29   6.5  
sp|Q6FM20|CIS1_CANGA Autophagy-related protein 31 OS=Candida gla...    29   8.4  
sp|Q8ZVQ9|SYP_PYRAE Prolyl-tRNA synthetase OS=Pyrobaculum aeroph...    29   8.4  

>sp|A1RSR6|SYP_PYRIL Prolyl-tRNA synthetase OS=Pyrobaculum
           islandicum (strain DSM 4184 / JCM 9189) GN=proS PE=3
           SV=1
          Length = 488

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = -3

Query: 164 LQIHQPVRMFLQEVRKLFP-VRMRRISMYSLARWIQSTSENASK 36
           L+++Q V +F  E +   P +R+R ISM+  A  + +T E+A +
Sbjct: 136 LRLYQIVSVFRAETKMTHPMIRLREISMFKEAHTVHATREDAER 179


>sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5
           OS=Mus musculus GN=Creb5 PE=2 SV=3
          Length = 357

 Score = 26.6 bits (57), Expect(2) = 5.7
 Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 10/55 (18%)
 Frame = +3

Query: 123 HFLKKHPNRLMNL----------EHPLHH*NRLPCAQQNLVPSHCSQSSDQHRCH 257
           H L  HP++   L          +HP HH +  P  QQN    H       H  H
Sbjct: 121 HHLHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAH 175



 Score = 21.6 bits (44), Expect(2) = 5.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 11  QSPYHSLHSYWH 46
           Q+P+H LHS+ H
Sbjct: 117 QTPHHHLHSHPH 128


>sp|Q05591|CBIJ_SALTY Cobalt-precorrin-6A reductase OS=Salmonella
           typhimurium GN=cbiJ PE=3 SV=1
          Length = 263

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 13/41 (31%)
 Frame = +3

Query: 90  DSSHPYWEQLSHFLKK-------------HPNRLMNLEHPL 173
           D+SHPY E +SH L +              P +L NL HPL
Sbjct: 73  DASHPYAEMVSHNLLRACETAGVLLSRYQRPEQLSNLTHPL 113


>sp|Q6FM20|CIS1_CANGA Autophagy-related protein 31 OS=Candida
           glabrata GN=CIS1 PE=3 SV=1
          Length = 182

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
 Frame = -2

Query: 285 NYRQQVPDTHGTDADL--MIENNDLELDFAERMEGDSNDEEDAPDXXXXXXXXXXSEKAV 112
           +YR++ P +  +   L  +   ND   D A +  GD +D    PD           E   
Sbjct: 87  SYRRERPVSLASQRSLSWLTSGNDTGGD-AGKKSGDISDPAAGPDVPREAPLSIELELVS 145

Query: 111 PSKDEKNLNVQSCKVD 64
             KD +NLN++  K+D
Sbjct: 146 EFKDYRNLNLEDLKLD 161


>sp|Q8ZVQ9|SYP_PYRAE Prolyl-tRNA synthetase OS=Pyrobaculum
           aerophilum GN=proS PE=3 SV=1
          Length = 488

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = -3

Query: 164 LQIHQPVRMFLQEVRKLFP-VRMRRISMYSLARWIQSTSENASK 36
           L+++Q V +F  E +   P +R+R ISM+  A  + +  E+A +
Sbjct: 136 LRVYQIVSVFRAETKMTHPMIRLREISMFKEAHTVHADKEDAER 179
tr_hit_id Q5NAR7
Definition tr|Q5NAR7|Q5NAR7_ORYSJ Putative FUSED serine/threonine kinase (Os01g0259400 protein) OS=Oryza sativa subsp. japonica
Align length 48
Score (bit) 48.1
E-value 0.0002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920165|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_G11.
         (301 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5NAR7|Q5NAR7_ORYSJ Putative FUSED serine/threonine kinase (O...    48   2e-04
tr|B8AC52|B8AC52_ORYSI Putative uncharacterized protein OS=Oryza...    48   2e-04
tr|A2ZRG0|A2ZRG0_ORYSJ Putative uncharacterized protein OS=Oryza...    48   2e-04
tr|Q3E9E3|Q3E9E3_ARATH Uncharacterized protein At5g18700.1 OS=Ar...    40   0.044
tr|A7NW94|A7NW94_VITVI Chromosome chr5 scaffold_2, whole genome ...    39   0.17 
tr|A9TXE0|A9TXE0_PHYPA Predicted protein OS=Physcomitrella paten...    38   0.22 
tr|A9SVX3|A9SVX3_PHYPA Predicted protein OS=Physcomitrella paten...    37   0.63 
tr|B5HSY8|B5HSY8_9ACTO Squalene-hopene cyclase OS=Streptomyces s...    34   4.1  
tr|Q9X7V9|Q9X7V9_STRCO Putative squalene-hopene cyclase OS=Strep...    33   7.0  
tr|B3NN53|B3NN53_DROER GG22720 OS=Drosophila erecta GN=GG22720 P...    33   9.1  

>tr|Q5NAR7|Q5NAR7_ORYSJ Putative FUSED serine/threonine kinase
           (Os01g0259400 protein) OS=Oryza sativa subsp. japonica
           GN=P0699D11.2 PE=4 SV=1
          Length = 1346

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 21/48 (43%), Positives = 29/48 (60%)
 Frame = -2

Query: 300 ETEGGNYRQQVPDTHGTDADLMIENNDLELDFAERMEGDSNDEEDAPD 157
           E +  NYR+   +    D ++ IENND+ELDF E  EGD+ D+ D  D
Sbjct: 358 EKDKENYRRHPTEASENDTEVKIENNDMELDFGENPEGDAPDDNDGSD 405


>tr|B8AC52|B8AC52_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_01252 PE=4 SV=1
          Length = 1346

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 21/48 (43%), Positives = 29/48 (60%)
 Frame = -2

Query: 300 ETEGGNYRQQVPDTHGTDADLMIENNDLELDFAERMEGDSNDEEDAPD 157
           E +  NYR+   +    D ++ IENND+ELDF E  EGD+ D+ D  D
Sbjct: 358 EKDKENYRRHPTEASENDTEVKIENNDMELDFGENPEGDAPDDNDGSD 405


>tr|A2ZRG0|A2ZRG0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_001132 PE=4 SV=1
          Length = 1393

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 21/48 (43%), Positives = 29/48 (60%)
 Frame = -2

Query: 300 ETEGGNYRQQVPDTHGTDADLMIENNDLELDFAERMEGDSNDEEDAPD 157
           E +  NYR+   +    D ++ IENND+ELDF E  EGD+ D+ D  D
Sbjct: 405 EKDKENYRRHPTEASENDTEVKIENNDMELDFGENPEGDAPDDNDGSD 452


>tr|Q3E9E3|Q3E9E3_ARATH Uncharacterized protein At5g18700.1
           OS=Arabidopsis thaliana GN=At5g18700 PE=4 SV=1
          Length = 1366

 Score = 40.4 bits (93), Expect = 0.044
 Identities = 17/48 (35%), Positives = 30/48 (62%)
 Frame = -2

Query: 300 ETEGGNYRQQVPDTHGTDADLMIENNDLELDFAERMEGDSNDEEDAPD 157
           E E  NYR+ +P+++   A++ I+N D+ELDF E  + +  DE +  +
Sbjct: 369 ENEKENYRRPLPNSNENCAEVKIDNTDMELDFDENNDDEGPDESEGTE 416


>tr|A7NW94|A7NW94_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019833001
           PE=4 SV=1
          Length = 1267

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = -2

Query: 270 VPDTHGTDADLMIENNDLELDFAERMEGDSNDEEDAPD 157
           +P+    D+++ IEN D+ELDF E  E + +DE D  D
Sbjct: 284 LPNNSENDSEVKIENTDMELDFNENTEDEPHDEPDGSD 321


>tr|A9TXE0|A9TXE0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_152269 PE=4 SV=1
          Length = 1398

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = -2

Query: 300 ETEGGNYRQQVPDTHGT--DADLMIENNDLELDFAERMEGDSNDEED 166
           E E   YRQQ    +GT  D D+ IEN D+EL+F E  + +  +E+D
Sbjct: 353 EAENDTYRQQ-SKANGTSDDTDVTIENRDVELNFGEGADSEGTEEDD 398


>tr|A9SVX3|A9SVX3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_136143 PE=4 SV=1
          Length = 1364

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 300 ETEGGNYRQQVPDTHGTD-ADLMIENNDLELDFAERMEGDSND 175
           ETE   YRQQ      +D  D+ +EN+DLEL+F E  E +  D
Sbjct: 360 ETENDTYRQQSKANGASDDTDVTLENHDLELNFGEGAETEEKD 402


>tr|B5HSY8|B5HSY8_9ACTO Squalene-hopene cyclase OS=Streptomyces
           sviceus ATCC 29083 GN=SSEG_08967 PE=4 SV=1
          Length = 669

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -3

Query: 134 LQEVRKLFPVRMRRISMYSLARWIQSTSENASKSGG 27
           + ++RK+ P R+RR +M S ARWI    EN    GG
Sbjct: 257 MHQLRKVAPRRLRRAAMNSAARWIIERQENDGCWGG 292


>tr|Q9X7V9|Q9X7V9_STRCO Putative squalene-hopene cyclase
           OS=Streptomyces coelicolor GN=SCO6764 PE=4 SV=1
          Length = 680

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = -3

Query: 152 QPVRMFLQEVRKLFPVRMRRISMYSLARWIQSTSENASKSGG 27
           Q +   L   RK+ P R+RR +M S ARWI    EN    GG
Sbjct: 247 QRIDKALHAYRKVAPRRLRRAAMNSAARWIIERQENDGCWGG 288


>tr|B3NN53|B3NN53_DROER GG22720 OS=Drosophila erecta GN=GG22720 PE=4
           SV=1
          Length = 1415

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = -2

Query: 285 NYRQQVPDTHGT-DADLMIENNDLELDFAERMEGDSNDEEDAPDXXXXXXXXXXSEKAVP 109
           N R++     GT +A+   EN DLE++  E  EGD+  +ED P+          +EK  P
Sbjct: 423 NEREEPEKPKGTTNAEKAKENEDLEIEIIEESEGDTKGKED-PNTTQKVKGVKETEKPEP 481

Query: 108 SKDEKNLNVQSCKVDTVN 55
            + E+       K D ++
Sbjct: 482 VEVEEEETEDPKKEDQID 499