BP920150 |
Clone id |
YMU001_000133_F04 |
Library |
YMU01 |
Length |
550 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000133_F04. |
Accession |
BP920150 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTGACACAACATACTGCATGCTTTACTGCACATAAAATCATTAAAGCATTCCAGCAAAAG ATCAAACTTATAGGAATAGAAAGACACTTAGCACCATCATTGCCAAGAAACCCAAATTGG TATCACCACTCACAAATTCACCATTATCCCTGCCAAAAGCGGCCTCAGCACTTAGCTGTC AAATTTTGTCCTATGCAAATTTTGACTTAAGACTCTTCTCTTTTTCCAATGCCCTTGGAG AAAATGGAAAGCACCATCCCCAAGTCAGGTAAGAGAAATTGGGTACAAAGACCCAAAATT ATGACCACCACCCCAATGAAAAGAGCCAAACCTAGCCACACCGATATCGTCCATCTCCAA TTCCCTATAAGTCCTACCCACCATGGAAGATCAGATTCCAGCCTTACTCCTGCCTCGTAC AATTCCGGTAATCCTGTGAGCAAAGGACGCCCTGCACGTGGCGCCAGCACAACACGCAAT GCTGTCGAAGAAAAAGTGTTTTGTTCTTGCCACTTTAGAGATGAGACAGCCAACGTCTGC GTCTCCAAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O15534 |
Definition |
sp|O15534|PER1_HUMAN Period circadian protein homolog 1 OS=Homo sapiens |
Align length |
68 |
Score (bit) |
35.0 |
E-value |
0.24 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SN34 |
Definition |
tr|A9SN34|A9SN34_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
93 |
Score (bit) |
75.1 |
E-value |
2.0e-12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920150|Adiantum capillus-veneris mRNA, clone: YMU001_000133_F04. (550 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SN34|A9SN34_PHYPA Predicted protein (Fragment) OS=Physcomit... 75 2e-12 tr|A9TUG1|A9TUG1_PHYPA Predicted protein (Fragment) OS=Physcomit... 71 3e-11 tr|A5BSZ7|A5BSZ7_VITVI Putative uncharacterized protein OS=Vitis... 67 6e-10 tr|B6U0B9|B6U0B9_MAIZE Putative uncharacterized protein OS=Zea m... 61 4e-08 tr|B6TWL7|B6TWL7_MAIZE Putative uncharacterized protein OS=Zea m... 61 4e-08 tr|Q9FFD9|Q9FFD9_ARATH Genomic DNA, chromosome 5, P1 clone:MQK4 ... 60 6e-08 tr|Q9FXF3|Q9FXF3_ARATH F1N18.18 protein OS=Arabidopsis thaliana ... 60 1e-07 tr|Q8L615|Q8L615_ARATH Putative uncharacterized protein At2g3438... 58 4e-07 tr|Q69SG4|Q69SG4_ORYSJ Os09g0534000 protein OS=Oryza sativa subs... 58 4e-07 tr|O64707|O64707_ARATH Putative uncharacterized protein At2g3438... 58 4e-07 tr|A3C0Y5|A3C0Y5_ORYSJ Putative uncharacterized protein OS=Oryza... 58 4e-07 tr|A7P240|A7P240_VITVI Chromosome chr19 scaffold_4, whole genome... 51 3e-05 tr|A5C3D8|A5C3D8_VITVI Putative uncharacterized protein OS=Vitis... 51 3e-05 tr|A7QDF0|A7QDF0_VITVI Chromosome chr10 scaffold_81, whole genom... 50 1e-04 tr|A5ANF5|A5ANF5_VITVI Putative uncharacterized protein OS=Vitis... 50 1e-04 tr|Q2QXP5|Q2QXP5_ORYSJ Os12g0148700 protein OS=Oryza sativa subs... 49 2e-04 tr|B8BM24|B8BM24_ORYSI Putative uncharacterized protein OS=Oryza... 49 2e-04 tr|B8BDV5|B8BDV5_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.004 tr|Q4L470|Q4L470_STAHJ ABC-type cobalamin/Fe3+-siderophores tran... 38 0.31 tr|A7NNZ4|A7NNZ4_ROSCS Abortive infection protein OS=Roseiflexus... 37 0.89 tr|B2WB12|B2WB12_PYRTR Putative uncharacterized protein OS=Pyren... 36 1.2 tr|Q1E3Q2|Q1E3Q2_COCIM Predicted protein OS=Coccidioides immitis... 36 1.5 tr|Q0KKA0|Q0KKA0_FLAVE Pilues specific hydrohobin-like protein O... 36 1.5 tr|B6NXZ4|B6NXZ4_BRAFL Putative uncharacterized protein (Fragmen... 35 2.0 tr|B6L2U8|B6L2U8_BRAFL Putative uncharacterized protein (Fragmen... 35 2.0 tr|Q5KF77|Q5KF77_CRYNE Rho GTPase activator, putative OS=Cryptoc... 35 2.0 tr|Q55QZ0|Q55QZ0_CRYNE Putative uncharacterized protein OS=Crypt... 35 2.0 tr|A8K4U6|A8K4U6_HUMAN cDNA FLJ77255, highly similar to Homo sap... 35 2.6 tr|A2I2P6|A2I2P6_HUMAN Period 1 OS=Homo sapiens GN=PER1 PE=4 SV=1 35 2.6 tr|Q5Y9D3|Q5Y9D3_9METZ Brachyury OS=Sycon raphanus GN=Bra PE=2 SV=1 35 2.6
>tr|A9SN34|A9SN34_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_19000 PE=4 SV=1 Length = 141
Score = 75.1 bits (183), Expect = 2e-12 Identities = 38/93 (40%), Positives = 55/93 (59%) Frame = -3
Query: 545 ETQTLAVSSLKWQEQNTFSSTALRVVLAPRAGRPLLTGLPELYEAGVRLESDLPWWVGLI 366 E+Q L + + +++ T + +R VL RAG P GLPE+Y A ++ S LPW L+ Sbjct: 49 ESQVLGLRLFENEKETTTPTAMVRFVLESRAGSPRGQGLPEVYSAEAQVLSVLPWSKDLL 108
Query: 365 GNWRWTISVWLGLALFIGVVVIILGLCTQFLLP 267 W+WT +W L+LF+ VVI+L C Q LLP Sbjct: 109 RGWKWTFYLWSALSLFMFEVVIVLCCCHQVLLP 141
>tr|A9TUG1|A9TUG1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_4743 PE=4 SV=1 Length = 264
Score = 71.2 bits (173), Expect = 3e-11 Identities = 35/93 (37%), Positives = 54/93 (58%) Frame = -3
Query: 545 ETQTLAVSSLKWQEQNTFSSTALRVVLAPRAGRPLLTGLPELYEAGVRLESDLPWWVGLI 366 E+Q L + + ++ + +R VL PRAG P GLPE+Y A +++S LPW L+ Sbjct: 163 ESQMLGLRLFENEKTLSAPVAMVRFVLEPRAGFPRGHGLPEVYSAEAQVQSVLPWTRDLL 222
Query: 365 GNWRWTISVWLGLALFIGVVVIILGLCTQFLLP 267 W+WT VW L +F+ ++++L C Q LLP Sbjct: 223 RRWKWTFYVWNALCIFMFEIMVVLCCCHQVLLP 255
>tr|A5BSZ7|A5BSZ7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024107 PE=4 SV=1 Length = 403
Score = 67.0 bits (162), Expect = 6e-10 Identities = 35/93 (37%), Positives = 55/93 (59%) Frame = -3
Query: 545 ETQTLAVSSLKWQEQNTFSSTALRVVLAPRAGRPLLTGLPELYEAGVRLESDLPWWVGLI 366 ETQ L + LK +E + + A+RV L PRAG LP++YEA + + S LPW L+ Sbjct: 227 ETQELTIEILKHKEGYS-RTKAIRVTLIPRAGT---LSLPQIYEAELLMNSQLPWKKKLV 282
Query: 365 GNWRWTISVWLGLALFIGVVVIILGLCTQFLLP 267 +W+WT VW+ L ++I ++V+++ L P Sbjct: 283 XSWKWTFYVWMSLYVYIMLLVVLMCCFRPVLFP 315
>tr|B6U0B9|B6U0B9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 128
Score = 60.8 bits (146), Expect = 4e-08 Identities = 29/77 (37%), Positives = 43/77 (55%) Frame = -3
Query: 488 STALRVVLAPRAGRPLLTGLPELYEAGVRLESDLPWWVGLIGNWRWTISVWLGLALFIGV 309 +TA+R++L RA G+PE+Y A ++LE +LP L+ NWRWT VW LF+ Sbjct: 46 TTAVRIILEQRAEFGRGAGIPEIYVASLKLEGELPLVRRLLWNWRWTFFVWSSTGLFVSE 105
Query: 308 VVIILGLCTQFLLPDLG 258 ++ L C + P G Sbjct: 106 LLFALVCCRPCIFPRSG 122
>tr|B6TWL7|B6TWL7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 471
Score = 60.8 bits (146), Expect = 4e-08 Identities = 29/77 (37%), Positives = 43/77 (55%) Frame = -3
Query: 488 STALRVVLAPRAGRPLLTGLPELYEAGVRLESDLPWWVGLIGNWRWTISVWLGLALFIGV 309 +TA+R++L RA G+PE+Y A ++LE +LP L+ NWRWT VW LF+ Sbjct: 389 TTAVRIILEQRAEFGRGAGIPEIYVASLKLEGELPLVRRLLWNWRWTFFVWSSTGLFVSE 448
Query: 308 VVIILGLCTQFLLPDLG 258 ++ L C + P G Sbjct: 449 LLFALVCCRPCIFPRSG 465
>tr|Q9FFD9|Q9FFD9_ARATH Genomic DNA, chromosome 5, P1 clone:MQK4 OS=Arabidopsis thaliana PE=4 SV=1 Length = 368
Score = 60.5 bits (145), Expect = 6e-08 Identities = 32/93 (34%), Positives = 50/93 (53%) Frame = -3
Query: 545 ETQTLAVSSLKWQEQNTFSSTALRVVLAPRAGRPLLTGLPELYEAGVRLESDLPWWVGLI 366 E QT+ + +LK QE+ + A+R L PRA L P+LYEA + + S PW + Sbjct: 230 EAQTMRIDALKHQEKMP-RTKAVRATLIPRAQTRTL---PQLYEAEIVINSKPPWIKRMA 285
Query: 365 GNWRWTISVWLGLALFIGVVVIILGLCTQFLLP 267 NW+WT+ VW + L++ ++ +L L P Sbjct: 286 YNWKWTLCVWTSMYLYVAILTALLWCFRPVLFP 318
>tr|Q9FXF3|Q9FXF3_ARATH F1N18.18 protein OS=Arabidopsis thaliana GN=F1N18.18 PE=4 SV=1 Length = 161
Score = 59.7 bits (143), Expect = 1e-07 Identities = 31/93 (33%), Positives = 54/93 (58%) Frame = -3
Query: 545 ETQTLAVSSLKWQEQNTFSSTALRVVLAPRAGRPLLTGLPELYEAGVRLESDLPWWVGLI 366 E QTL++ LK + + L++++ RA G+PELY+A + +ES LP++ +I Sbjct: 53 EIQTLSLK-LKGFVEKDIPTACLKIIIEQRAEFRPGAGIPELYDASLSVESGLPFFRKII 111
Query: 365 GNWRWTISVWLGLALFIGVVVIILGLCTQFLLP 267 WR T+ VW+ ++LFI ++ L C ++P Sbjct: 112 WKWRKTLFVWISMSLFITELLFTLVCCRPLIIP 144
>tr|Q8L615|Q8L615_ARATH Putative uncharacterized protein At2g34380 OS=Arabidopsis thaliana GN=At2g34380 PE=2 SV=1 Length = 509
Score = 57.8 bits (138), Expect = 4e-07 Identities = 31/96 (32%), Positives = 53/96 (55%) Frame = -3
Query: 545 ETQTLAVSSLKWQEQNTFSSTALRVVLAPRAGRPLLTGLPELYEAGVRLESDLPWWVGLI 366 E QTL + E++ + L++++ RA G+PE+Y+A + LES LP+ +I Sbjct: 389 EIQTLNLKLKGLVEKDIIPTACLKIMIEQRAEFRPGAGIPEIYDASLFLESKLPFLKRII 448
Query: 365 GNWRWTISVWLGLALFIGVVVIILGLCTQFLLPDLG 258 NWR T+ VW+ ++LFI ++ L ++P G Sbjct: 449 WNWRKTLFVWISMSLFIMELLFALVFFRPLIIPRTG 484
>tr|Q69SG4|Q69SG4_ORYSJ Os09g0534000 protein OS=Oryza sativa subsp. japonica GN=OJ1112_E07.18 PE=4 SV=1 Length = 457
Score = 57.8 bits (138), Expect = 4e-07 Identities = 25/74 (33%), Positives = 43/74 (58%) Frame = -3
Query: 479 LRVVLAPRAGRPLLTGLPELYEAGVRLESDLPWWVGLIGNWRWTISVWLGLALFIGVVVI 300 +R++L RA G+PE+Y A ++LE++LP ++ NWRWT+ VW + F+ +++ Sbjct: 378 IRIILEQRAEFSPGAGIPEIYAASLKLEAELPLLKRILWNWRWTLFVWSSMGFFVFELLL 437
Query: 299 ILGLCTQFLLPDLG 258 L C + P G Sbjct: 438 ALICCRPCIFPRSG 451
>tr|O64707|O64707_ARATH Putative uncharacterized protein At2g34380 OS=Arabidopsis thaliana GN=At2g34380 PE=4 SV=1 Length = 459
Score = 57.8 bits (138), Expect = 4e-07 Identities = 31/96 (32%), Positives = 53/96 (55%) Frame = -3
Query: 545 ETQTLAVSSLKWQEQNTFSSTALRVVLAPRAGRPLLTGLPELYEAGVRLESDLPWWVGLI 366 E QTL + E++ + L++++ RA G+PE+Y+A + LES LP+ +I Sbjct: 339 EIQTLNLKLKGLVEKDIIPTACLKIMIEQRAEFRPGAGIPEIYDASLFLESKLPFLKRII 398
Query: 365 GNWRWTISVWLGLALFIGVVVIILGLCTQFLLPDLG 258 NWR T+ VW+ ++LFI ++ L ++P G Sbjct: 399 WNWRKTLFVWISMSLFIMELLFALVFFRPLIIPRTG 434
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