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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920142
Clone id YMU001_000133_E05
Library
Length 486
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000133_E05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTGTCACGTGAAACATACTTCCATACTTCCAATATCAATGGAAAACTTTGTGGATATGTA
CAAATATGTAGAAAAAGTGTTTGGGCTTGCTTTCTAGGAGGCTTACTTGGAACACTCTAC
ACTTCTTTGTACTAATTTATGTATAATAACTATTGCTTGAAGCATTATGCAAACTCGTGT
ACTCGCCCTGATACTAGCAAAGGGAGAGAACCACAATCATTTCCCGTGACATACCAAGGA
AAGCTTCAATTCTACTTTCCTACTGATAGATGTCATCCCAAACAAAGGCTGTCATTGCCA
ATTGAGTGTCCCACTTTTACCATTTGGGACCTTAATCACATCCAACATTTGACGTCATGG
GCTCATCATGAAGTCGCAATACAGCATTACTTACTTGCTACTTTGGAGGTCTGCTTGGCT
CTGTAGCAGCTTGAAGGCATTTGCTGTTTTCTCATCAAAGCCTCCTGCAAAATTATGTAC
TTGAAG
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920142|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_E05.
         (486 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id B8BNT3
Definition tr|B8BNT3|B8BNT3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 29
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920142|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_E05.
         (486 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8BNT3|B8BNT3_ORYSI Putative uncharacterized protein OS=Oryza...    35   1.9  
tr|A3CE50|A3CE50_ORYSJ Putative uncharacterized protein OS=Oryza...    35   1.9  
tr|B0WXK1|B0WXK1_CULQU Putative uncharacterized protein OS=Culex...    34   4.1  
tr|Q9LI74|Q9LI74_ARATH Similarity to pherophorin (Actin binding ...    33   9.3  
tr|A7Q4U9|A7Q4U9_VITVI Chromosome chr10 scaffold_50, whole genom...    33   9.3  
tr|A8NQ32|A8NQ32_COPC7 Predicted protein OS=Coprinopsis cinerea ...    33   9.3  

>tr|B8BNT3|B8BNT3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_37158 PE=4 SV=1
          Length = 930

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 15/29 (51%), Positives = 22/29 (75%)
 Frame = -1

Query: 483 QVHNFAGGFDEKTANAFKLLQSQADLQSS 397
           +VH FAGGFDE++  AF+ L+S+   Q+S
Sbjct: 895 RVHQFAGGFDEESMKAFEELRSKMSTQTS 923


>tr|A3CE50|A3CE50_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_033572 PE=4 SV=1
          Length = 1190

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 15/29 (51%), Positives = 22/29 (75%)
 Frame = -1

Query: 483  QVHNFAGGFDEKTANAFKLLQSQADLQSS 397
            +VH FAGGFDE++  AF+ L+S+   Q+S
Sbjct: 1155 RVHQFAGGFDEESMKAFEELRSKMSTQTS 1183


>tr|B0WXK1|B0WXK1_CULQU Putative uncharacterized protein OS=Culex
           quinquefasciatus GN=CpipJ_CPIJ011910 PE=4 SV=1
          Length = 230

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
 Frame = +2

Query: 275 IPNKGCHCQLSVPLLPFGTLITSNI*RHGLIMKSQYSITYLLLWRSAWLCS-SLKAFAVF 451
           I  K C   L  P++  GTL++ +   +G+++++ + +   L+  +  LCS  L  FA+F
Sbjct: 155 ILKKKCTEGLPFPIIFAGTLVSLSWLLYGIVLRNDFIVVQNLI--ALALCSVQLALFAIF 212

Query: 452 SSKPPAKL 475
            SKP +K+
Sbjct: 213 PSKPASKV 220


>tr|Q9LI74|Q9LI74_ARATH Similarity to pherophorin (Actin binding
            protein) OS=Arabidopsis thaliana GN=CHUP1 PE=2 SV=1
          Length = 1004

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = -1

Query: 483  QVHNFAGGFDEKTANAFKLLQSQADLQS 400
            +VH FAGGFD ++  AF+ L+S+A  +S
Sbjct: 959  RVHQFAGGFDAESMKAFEELRSRAKTES 986


>tr|A7Q4U9|A7Q4U9_VITVI Chromosome chr10 scaffold_50, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00029855001
           PE=4 SV=1
          Length = 781

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -1

Query: 483 QVHNFAGGFDEKTANAFKLLQSQADLQSSK 394
           ++H FAGGFD +T +AF+ L++ A L + K
Sbjct: 737 RIHQFAGGFDVETMHAFEELRNLAHLLNKK 766


>tr|A8NQ32|A8NQ32_COPC7 Predicted protein OS=Coprinopsis cinerea
           (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_05431 PE=4
           SV=1
          Length = 413

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +1

Query: 211 PQSFPVTYQGKLQFYFPTDRCHPKQRLSLPIECPTF--TIWDLNHIQHLTSWAHHEVAIQ 384
           PQS  +   G L FY  TDR H      +  +C     ++ D+  IQ L +W+   + +Q
Sbjct: 203 PQSLEIEQDGVLHFYVWTDR-HDVASFPIKRDCYVLYRSVLDIPAIQSLPAWSIRSLRLQ 261

Query: 385 HY 390
           +Y
Sbjct: 262 NY 263