BP920138
Clone id YMU001_000133_E01
Library
Length 423
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000133_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAGGCCCACCTTTTTTAAGTAGTTATTTGTGTGCAGACAAGGGCATAACAATGTGCACGT
AGATTGATTCTCAAGTTCCTCATTGAAATCATAACAAGCTACAACAAATTCAAGAGAATT
GTAGCAAAGTTCCTTTTTTTCAAGAAAATCATGAATTTTCTTAACTATAGCAAATTTCCT
TCTTTTTAAGAAAATCACGAATTTTCTTAACTATAATTCAGTTAAGAAGCTCAATCTTCC
ACAAATGGCCATGTCACATTGTTAGAAGGTAGCATTGATTAACAGGCACGACACCAAAGT
CAGGGATACTCAAGTTAAAGATGCCTCTGCAAGGGAAGGAGTTTCTTCAAGAATACATCA
ATGTTTTTTTTAATGACTTACATACTGGTTTACCATCTACATGGGATGTGCAACACAACA
TAT
■■Homology search results ■■ -
sp_hit_id Q6TND0
Definition sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii
Align length 28
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920138|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_E01.
(408 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii GN=matK PE=3 SV=1 31 2.2
sp|Q6TND4|MATK_DALPU Maturase K OS=Dalea purpurea GN=matK PE=3 SV=1 31 2.2
sp|Q54HM0|ABCGG_DICDI ABC transporter G family member 16 OS=Dict... 29 8.2
sp|P31916|MAT2_EUGGR Maturase-like protein 2 OS=Euglena gracilis... 29 8.5
sp|A5LFX5|KCNU1_MACFA Potassium channel subfamily U member 1 OS=... 29 8.5

>sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii GN=matK PE=3 SV=1
Length = 512

Score = 30.8 bits (68), Expect = 2.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1

Query: 85 EIITSYNKFKRIVAKFLFFKKIMNFLNY 168
E+I SYNK + I A F FF+ +LNY
Sbjct: 122 EVIKSYNKLRSIHAIFPFFEDKFTYLNY 149


>sp|Q6TND4|MATK_DALPU Maturase K OS=Dalea purpurea GN=matK PE=3 SV=1
Length = 509

Score = 30.8 bits (68), Expect = 2.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1

Query: 85 EIITSYNKFKRIVAKFLFFKKIMNFLNY 168
E+I SYNK + I A F FF+ +LNY
Sbjct: 119 EVIKSYNKLRSIHAIFPFFEDKFTYLNY 146


>sp|Q54HM0|ABCGG_DICDI ABC transporter G family member 16
OS=Dictyostelium discoideum GN=abcG16 PE=3 SV=1
Length = 1528

Score = 28.9 bits (63), Expect = 8.2
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Frame = +3

Query: 129 VPFFQENHEFS*L*QISFFLRKSRIFLTIIQLRSSIFHKWPCHIVRR*H*LTGTTPKSG- 305
+PF + + L +SF+L+ + L + + S + + C LT PK G
Sbjct: 176 IPFLKRKEKIEILKDLSFYLKPGMMVLLLSEAGSGVSTLFKC--------LTNRIPKRGS 227

Query: 306 ----ILKLKMPLQGKEFLQEYINVFFNDLH 383
IL P+ G+ +Y+ V +D H
Sbjct: 228 INGDILFDNEPIDGESHHSQYLFVQQSDHH 257


>sp|P31916|MAT2_EUGGR Maturase-like protein 2 OS=Euglena gracilis
GN=mat2 PE=4 SV=3
Length = 758

Score = 28.9 bits (63), Expect = 8.5
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1

Query: 58 RRLILKFLIEIITSYNKFKRIVAKFLFFKKIMNFLNYSKFPSF*ENHEFS 207
++ L +IIT +N F + + + + NF + +P+F + FS
Sbjct: 424 KKYFLNVFQKIITKHNTFLKALKNIFHYSRCFNFFKKNCYPNFYKKKNFS 473


>sp|A5LFX5|KCNU1_MACFA Potassium channel subfamily U member 1
OS=Macaca fascicularis GN=KCNU1 PE=2 SV=1
Length = 1149

Score = 28.9 bits (63), Expect = 8.5
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -1

Query: 186 KRRKFAIVKKIHDF-LEKKELCYNSLEFVVACYDFNEELENQSTCTLL 46
+ ++F I + ++F L +L + ++ F ACY NEE +Q + ++
Sbjct: 1012 ENKRFVITRPANEFKLLPSDLVFCAIPFSTACYKRNEEFSSQKSYEII 1059


tr_hit_id Q7YYI3
Definition tr|Q7YYI3|Q7YYI3_CRYPV Putative uncharacterized protein OS=Cryptosporidium parvum
Align length 38
Score (bit) 33.1
E-value 7.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920138|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_E01.
(408 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7YYI3|Q7YYI3_CRYPV Putative uncharacterized protein OS=Crypt... 33 7.1
tr|Q5CX84|Q5CX84_CRYPV Putative uncharacterized protein OS=Crypt... 33 7.1
tr|Q3LWD7|Q3LWD7_BIGNA Putative uncharacterized protein OS=Bigel... 33 9.4

>tr|Q7YYI3|Q7YYI3_CRYPV Putative uncharacterized protein
OS=Cryptosporidium parvum GN=1MB.209 PE=4 SV=1
Length = 1412

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -1

Query: 177 KFAIVKKIHDFLEKKELCYNSLEFVVACYDFNEELENQ 64
KFA+ +I+ LEKK++ SLE+ + YD +++LE++
Sbjct: 1197 KFAVKNRINFSLEKKQIILISLEYRIWKYDIHKQLESK 1234


>tr|Q5CX84|Q5CX84_CRYPV Putative uncharacterized protein
OS=Cryptosporidium parvum Iowa II GN=cgd6_2100 PE=4 SV=1
Length = 1645

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -1

Query: 177 KFAIVKKIHDFLEKKELCYNSLEFVVACYDFNEELENQ 64
KFA+ +I+ LEKK++ SLE+ + YD +++LE++
Sbjct: 1304 KFAVKNRINFSLEKKQIILISLEYRIWKYDIHKQLESK 1341


>tr|Q3LWD7|Q3LWD7_BIGNA Putative uncharacterized protein
OS=Bigelowiella natans PE=4 SV=1
Length = 500

Score = 32.7 bits (73), Expect = 9.4
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +2

Query: 104 TNSREL*QSSFFSRKS*IF----LTIANFLLFKKITNFLNYNSVKKLNLPQMAMSHC*KV 271
TN + + ++ FFS+ + I+ LLF+K +N +N+ K N P + +
Sbjct: 194 TNIKNIFRNVFFSKYKNWYSHNSFFISKGLLFQKYSNHINFKRTSKSN-PSIIII---PT 249

Query: 272 ALINRHDTKVRDTQVK 319
+LIN+ D+K +D+ +K
Sbjct: 250 SLINKKDSKFKDSSIK 265