BP920100
Clone id YMU001_000133_A04
Library
Length 617
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000133_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CGAAGAAACCTTCTCTCTGATCCTTTGCAAGTGGAGAGCCTGCTGTGTCTACTTCCCGCC
CACCTGCCATAGCCTACCCATTTTTGGGTGATGTAGACAATCCTTTCAGTGAAATTTCTC
TTTCTTGCAGTTTACTCATCGTAGTATTTGACTTCATCAAAGTAAGATGCCATGTGTTGT
CATCTTCAGCTCGTATCACTCTTTTCTGGACCGTTTCTGGAAATTTAAGCTGAGGCATGA
AGTTAACCTCAGCACCCTTGGATTCGCCACTTGTGCCTTTGGTATCATTCTGACCCAAAT
CAGCATTCACAGTTTTCTCACAGCCGGTGCTTTCATCTCCATCACTCTCATAACCCTTGC
CTTGCAATCTCATTTCCGCTTCTGCAGAATCCTGCTTCTCCTGGCTATTCCCTAACTGAA
CTTGTTCACTACCATCATCTCCTTTCAATCCCAGTGATGGTGATTTTTGCTTATCTACAG
GTGAGGCGCTCATCCATGTGTTGCTGCCTGGCCTGCAAAAACCATGAAGTGTATCCTCCT
TCTTGCCCTTTTTCTGGTGATTTAGCTCTTCTACGAGGTGCTTCCTTTTCTTCCCAGCAT
CCTGAAATTTCTGTTGC
■■Homology search results ■■ -
sp_hit_id P40020
Definition sp|P40020|FIR1_YEAST Factor interacting with REF2 OS=Saccharomyces cerevisiae
Align length 138
Score (bit) 38.5
E-value 0.028
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920100|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_A04.
(617 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P40020|FIR1_YEAST Factor interacting with REF2 OS=Saccharomyc... 39 0.028
sp|O43719|HTSF1_HUMAN HIV Tat-specific factor 1 OS=Homo sapiens ... 38 0.037
sp|Q5RB63|HTSF1_PONAB HIV Tat-specific factor 1 homolog OS=Pongo... 37 0.062
sp|O43290|SNUT1_HUMAN U4/U6.U5 tri-snRNP-associated protein 1 OS... 35 0.31
sp|P04929|HRPX_PLALO Histidine-rich glycoprotein OS=Plasmodium l... 35 0.31
sp|Q5M7D6|P4R2A_XENLA Serine/threonine-protein phosphatase 4 reg... 35 0.40
sp|Q2VIS4|FILA2_MOUSE Filaggrin-2 OS=Mus musculus GN=Flg2 PE=2 SV=2 35 0.40
sp|Q5UQ50|COLL6_MIMIV Collagen-like protein 6 OS=Acanthamoeba po... 35 0.40
sp|Q54G14|Y0266_DICDI Uncharacterized protein DDB_G0290685 OS=Di... 34 0.69
sp|Q5UPX3|COLL3_MIMIV Collagen-like protein 3 OS=Acanthamoeba po... 34 0.69
sp|Q5XIW8|SNUT1_RAT U4/U6.U5 tri-snRNP-associated protein 1 OS=R... 33 0.90
sp|Q9Z315|SNUT1_MOUSE U4/U6.U5 tri-snRNP-associated protein 1 OS... 33 0.90
sp|O85467|GERIA_BACCE Spore germination protein gerIA OS=Bacillu... 33 0.90
sp|Q5KN79|DBP4_CRYNE ATP-dependent RNA helicase DBP4 OS=Cryptoco... 33 0.90
sp|Q5KME7|PRP5_CRYNE Pre-mRNA-processing ATP-dependent RNA helic... 33 1.5
sp|Q5UQ13|COLL2_MIMIV Collagen-like protein 2 OS=Acanthamoeba po... 33 1.5
sp|Q01033|VG48_SHV21 Uncharacterized gene 48 protein OS=Saimirii... 32 2.0
sp|Q54KT2|Y8896_DICDI Putative uncharacterized protein DDB_G0287... 32 2.6
sp|Q92794|MYST3_HUMAN Histone acetyltransferase MYST3 OS=Homo sa... 32 3.4
sp|P38760|MIP6_YEAST RNA-binding protein MIP6 OS=Saccharomyces c... 32 3.4
sp|Q5UNS9|COLL7_MIMIV Collagen-like protein 7 OS=Acanthamoeba po... 32 3.4
sp|Q8R1U2|CGRE1_MOUSE Cell growth regulator with EF hand domain ... 32 3.4
sp|Q9JJA7|CCNL2_MOUSE Cyclin-L2 OS=Mus musculus GN=Ccnl2 PE=2 SV=1 32 3.4
sp|P55860|NEUM_XENLA Neuromodulin OS=Xenopus laevis GN=gap43 PE=... 31 4.5
sp|Q18DN4|HMU_HALWD Halomucin OS=Haloquadratum walsbyi (strain D... 31 4.5
sp|Q5UPS6|COLL5_MIMIV Collagen-like protein 5 OS=Acanthamoeba po... 31 4.5
sp|Q9UKB5|AJAP1_HUMAN Adherens junction-associated protein 1 OS=... 31 4.5
sp|Q16533|SNPC1_HUMAN snRNA-activating protein complex subunit 1... 31 5.8
sp|Q8I3Z1|MLRR1_PLAF7 MATH and LRR domain-containing protein PFE... 31 5.8
sp|Q5T8A7|K0649_HUMAN Protein KIAA0649 OS=Homo sapiens GN=KIAA06... 31 5.8

>sp|P40020|FIR1_YEAST Factor interacting with REF2 OS=Saccharomyces
cerevisiae GN=FIR1 PE=1 SV=3
Length = 876

Score = 38.5 bits (88), Expect = 0.028
Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 4/138 (2%)
Frame = -2

Query: 484 SPVDKQKSPSLGLKGDDGSEQVQLGNSQEKQDSAEAEMRLQGKGYESDGDESTGCEKTVN 305
SP +K K S + DG Q Q GN+ S E+ + Y + D V+
Sbjct: 245 SPQNKDKKRSSLVYDGDGYSQFQEGNTSS---STESSLEQPSSSYSDEDDSIPYAHHDVS 301

Query: 304 ADLGQNDTKGTSGESKGAEVNFMPQ---LKFPETVQKRVIR-AEDDNTWHLTLMKSNTTM 137
+L D G + A VN Q LK P+ ++ + R E+ NT
Sbjct: 302 FELNNADADKLLGIDENANVNLKIQRRNLKNPQHIKSKTDRECEEKNT------------ 349

Query: 136 SKLQEREISLKGLSTSPK 83
E+ +SLK LST K
Sbjct: 350 ----EKNVSLKILSTPNK 363


>sp|O43719|HTSF1_HUMAN HIV Tat-specific factor 1 OS=Homo sapiens
GN=HTATSF1 PE=1 SV=1
Length = 755

Score = 38.1 bits (87), Expect = 0.037
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Frame = -2

Query: 568 ELNHQKKGKKEDTLHGFCRPGSNTWMSASPVDKQKSPSLGL---KGDDGSEQVQLGNSQE 398
E + KK K+ TL C S ++K+ +G +D SE+ + E
Sbjct: 495 EEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSE 554

Query: 397 KQDSAEAEMRLQGKGYESDGDESTGCEK-----TVNADLGQNDTKGTSGESKGAE 248
KQ +E + G E D DE G EK ++ +L +ND++ + E G+E
Sbjct: 555 KQSEDGSEREFEENGLEKDLDEE-GSEKELHENVLDKELEENDSENSEFEDDGSE 608


>sp|Q5RB63|HTSF1_PONAB HIV Tat-specific factor 1 homolog OS=Pongo
abelii GN=HTATSF1 PE=2 SV=1
Length = 754

Score = 37.4 bits (85), Expect = 0.062
Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 8/165 (4%)
Frame = -2

Query: 553 KKGKKEDTLHGFCRPGSNTWMSASPVDKQKSPSLGL---KGDDGSEQVQLGNSQEKQDSA 383
KK K+ TL C S +K+ +G +D SE+ + EKQ
Sbjct: 500 KKESKKKTLRNDCEENGFAKESEDDPNKESEEEVGPTKESEEDDSEKESDEDCSEKQSED 559

Query: 382 EAEMRLQGKGYESDGDESTGCEK-----TVNADLGQNDTKGTSGESKGAEVNFMPQLKFP 218
+E + G E D DE G EK ++ +L +ND++ + E G+E +
Sbjct: 560 GSEREFEENGLEKDLDEE-GSEKELHENVLDKELEENDSENSEFEDDGSEKVLDEEGSER 618

Query: 217 ETVQKRVIRAEDDNTWHLTLMKSNTTMSKLQEREISLKGLSTSPK 83
E + + E+++T+ + + K E KGL + K
Sbjct: 619 EFDEDSDEKEEEEDTYEKVF--DDESNEKEDEEYADEKGLEAADK 661


>sp|O43290|SNUT1_HUMAN U4/U6.U5 tri-snRNP-associated protein 1
OS=Homo sapiens GN=SART1 PE=1 SV=1
Length = 800

Score = 35.0 bits (79), Expect = 0.31
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = -2

Query: 613 QKFQDAGKKRKHLVEELNHQKKGKKEDTLHGFCRPGSNTWMSASPVDKQ--KSPSLGLKG 440
Q+ +D+G+K +V++L +++G +ED R G+ + + S + + P+ GL G
Sbjct: 516 QQLRDSGEKVVEIVKKLESRQRGWEED--EDPERKGAIVFNATSEFCRTLGEIPTYGLAG 573

Query: 439 DDGSEQVQLGNSQEKQDSAEAEMRLQGKGYESDGDESTGCEKTVNAD 299
+ + +E D E R G ESDG+E+ G TVN D
Sbjct: 574 NREEQ-------EELMDFERDEERSANGGSESDGEENIGW-STVNLD 612


>sp|P04929|HRPX_PLALO Histidine-rich glycoprotein OS=Plasmodium
lophurae PE=4 SV=1
Length = 351

Score = 35.0 bits (79), Expect = 0.31
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +1

Query: 253 HPWIRHLCLWYHSD--PNQHSQFSHSRCFHLHHSHNP 357
HPW H L YH P+ H H+ H HH H P
Sbjct: 158 HPWFHHHHLGYHHHHAPHHHHHHHHAPHHHHHHHHAP 194


>sp|Q5M7D6|P4R2A_XENLA Serine/threonine-protein phosphatase 4
regulatory subunit 2-A OS=Xenopus laevis GN=ppp4r2-A
PE=2 SV=1
Length = 403

Score = 34.7 bits (78), Expect = 0.40
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Frame = -2

Query: 472 KQKSPSLGLKGDDGSEQVQLGNSQEKQDSAEA-EMRLQGKGYESDGDESTGC-----EKT 311
K+KS S DDGS+ N +DSAE E ++ ++ D +E C
Sbjct: 207 KEKSQSDSAVSDDGSQATTSRNKHSAEDSAEVEEHEVKRLKFDPDEEEEAACANPDASSE 266

Query: 310 VNADLGQNDTKGTSGESKGAE 248
V+A++ + ++ KG E
Sbjct: 267 VSAEMAEEAESASTSADKGKE 287


>sp|Q2VIS4|FILA2_MOUSE Filaggrin-2 OS=Mus musculus GN=Flg2 PE=2 SV=2
Length = 2362

Score = 34.7 bits (78), Expect = 0.40
Identities = 27/95 (28%), Positives = 43/95 (45%)
Frame = -2

Query: 598 AGKKRKHLVEELNHQKKGKKEDTLHGFCRPGSNTWMSASPVDKQKSPSLGLKGDDGSEQV 419
+ KR +EL+ ++ +K+ HG ++W S D +S LG KGD +
Sbjct: 156 SNSKRLERQDELSSSEESRKKH--HGSIF--GHSWSSNKEKDGSRSEELGEKGDKSYD-- 209

Query: 418 QLGNSQEKQDSAEAEMRLQGKGYESDGDESTGCEK 314
S+E ++ E+ RL +G E S G EK
Sbjct: 210 --SPSRESEEEYESGYRLNHQGREGHSGLSCGLEK 242


>sp|Q5UQ50|COLL6_MIMIV Collagen-like protein 6 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L668 PE=4 SV=1
Length = 1387

Score = 34.7 bits (78), Expect = 0.40
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -2

Query: 451 GLKGDDGSEQVQLGNSQEKQDSAEAEMRLQGKGYESD-GDESTGCEKTVNADLGQNDTKG 275
G KGD+G + GN +K D+ + KG + D GD+ +K N D G N KG
Sbjct: 695 GDKGDNGDK----GNKGDKGDNGD-------KGNKGDKGDKGDNGDKGDNGDKGDNGDKG 743

Query: 274 TSGES 260
GES
Sbjct: 744 DKGES 748



Score = 33.9 bits (76), Expect = 0.69
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = -2

Query: 475 DKQKSPSLGLKGDDGSEQVQLGNSQEKQDSAEAEMRLQGKGYESD-GDESTGCEKTVNAD 299
DK + G KGD+G + GN +K D+ + KG + D GD+ +K N D
Sbjct: 627 DKGDNGDKGDKGDNGDK----GNKGDKGDNGD-------KGDKGDNGDKGNKGDKGDNGD 675

Query: 298 LGQNDTKGTSGES 260
G N KG G++
Sbjct: 676 KGDNGDKGNKGDN 688



Score = 32.0 bits (71), Expect = 2.6
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -2

Query: 457 SLGLKGDDGSEQVQLGNSQEKQDSAEAEMRLQGKGYESD-GDESTGCEKTVNADLGQNDT 281
S G KGD GS+ + GN+ K D + KG + D GD K D G N
Sbjct: 345 SKGYKGDKGSKGTK-GNNGFKGDRGDKG----DKGSKGDKGDNGIKGNKGSKGDKGDNGI 399

Query: 280 KGTSGESKGAEVNF 239
KG GES G+ + F
Sbjct: 400 KGEKGES-GSSILF 412


>sp|Q54G14|Y0266_DICDI Uncharacterized protein DDB_G0290685
OS=Dictyostelium discoideum GN=DDB_G0290685 PE=2 SV=2
Length = 1081

Score = 33.9 bits (76), Expect = 0.69
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = -2

Query: 475 DKQKSPSLGLKGDDGSEQVQLGNSQEKQDSAEAEMRLQGKGYESDGDESTGCEKTVNADL 296
D+ + G DG E Q G+ QD E Q DGDE+ + N D
Sbjct: 851 DENNNQDGGENNQDGGENNQDGDENNNQDGGENN---QDGENNQDGDENNNQDGEQNQDG 907

Query: 295 GQNDTKGTSGESKGAEVN 242
+N+ +G ++G + N
Sbjct: 908 DENNQEGDENNNQGDDEN 925



Score = 31.6 bits (70), Expect = 3.4
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Frame = -2

Query: 451 GLKGDDGSEQVQLG---NSQEKQDSAEAEMRLQGKGYESDGDESTGCEKTVNADLGQNDT 281
G DG E Q G N + +++ + E G DGDE+ N D G+N+
Sbjct: 607 GENKQDGGENNQDGGENNQDDGENNQDGENNQDGGENNQDGDENNQDSGENNQDSGENNQ 666

Query: 280 KGTSGESKGAEVN 242
G G E N
Sbjct: 667 DGGENNQDGDENN 679


>sp|Q5UPX3|COLL3_MIMIV Collagen-like protein 3 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R239 PE=4 SV=1
Length = 939

Score = 33.9 bits (76), Expect = 0.69
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Frame = -2

Query: 475 DKQKSPSLGLKGDDGSEQVQLGNSQEKQDSAE----AEMRLQGK-GYESD-GDESTGCEK 314
+K + G KGD+G E+ + G EK D+ E ++ ++G+ G ++D GD+ +K
Sbjct: 452 EKGDNGEKGDKGDNG-EKGEKGEKGEKGDNGEKGEKGDVGIKGESGADADKGDKGEKGDK 510

Query: 313 TVNADLGQNDTKGTSG 266
VN D G +KG +G
Sbjct: 511 GVNGDKGDKGSKGDTG 526


tr_hit_id Q5B978
Definition tr|Q5B978|Q5B978_EMENI Putative uncharacterized protein OS=Emericella nidulans
Align length 115
Score (bit) 44.7
E-value 0.004
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920100|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_A04.
(617 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5B978|Q5B978_EMENI Putative uncharacterized protein OS=Emeri... 45 0.004
tr|A3Q2I5|A3Q2I5_MYCSJ Putative uncharacterized protein OS=Mycob... 40 0.084
tr|Q1B5Z7|Q1B5Z7_MYCSS Putative uncharacterized protein OS=Mycob... 40 0.11
tr|A1UJ39|A1UJ39_MYCSK Putative uncharacterized protein OS=Mycob... 40 0.11
tr|B5VHG7|B5VHG7_YEAS6 YER032Wp-like protein (Fragment) OS=Sacch... 39 0.32
tr|A6ZQY1|A6ZQY1_YEAS7 Factor interacting with ref2 OS=Saccharom... 39 0.32
tr|Q9ET15|Q9ET15_MOUSE Retinitis pigmentosa GTPase regulator (Fr... 38 0.42
tr|B7U588|B7U588_BACSU Putative uncharacterized protein OS=Bacil... 38 0.42
tr|B4HTA2|B4HTA2_DROSE GM21729 OS=Drosophila sechellia GN=GM2172... 38 0.42
tr|B4DRS4|B4DRS4_HUMAN cDNA FLJ60139, highly similar to Homo sap... 38 0.42
tr|B7HC04|B7HC04_BACCE Group-specific protein OS=Bacillus cereus... 38 0.54
tr|A5E512|A5E512_LODEL Putative uncharacterized protein OS=Lodde... 38 0.54
tr|Q03CZ4|Q03CZ4_LACC3 Periplasmic glycine betaine/choline-bindi... 37 0.71
tr|B3W6U7|B3W6U7_LACCB Putative ABC transporter; osmoprotectant-... 37 0.71
tr|A3ZYA7|A3ZYA7_9PLAN BatB OS=Blastopirellula marina DSM 3645 G... 37 0.71
tr|B6N1I7|B6N1I7_BRAFL Putative uncharacterized protein OS=Branc... 37 0.71
tr|B6KV65|B6KV65_TOXGO Putative uncharacterized protein OS=Toxop... 37 0.71
tr|B4N5B8|B4N5B8_DROWI GK20351 OS=Drosophila willistoni GN=GK203... 37 0.71
tr|B3MW27|B3MW27_DROAN GF22613 OS=Drosophila ananassae GN=GF2261... 37 0.93
tr|A0C4X9|A0C4X9_PARTE Chromosome undetermined scaffold_15, whol... 37 0.93
tr|Q46BD8|Q46BD8_METBF Putative uncharacterized protein OS=Metha... 37 0.93
tr|B6KI44|B6KI44_TOXGO YT521-B-like family domain-containing pro... 37 1.2
tr|B6KAU5|B6KAU5_TOXGO Putative uncharacterized protein OS=Toxop... 37 1.2
tr|B4QIG7|B4QIG7_DROSI GD11224 OS=Drosophila simulans GN=GD11224... 37 1.2
tr|A5K031|A5K031_PLAVI cAMP-dependent protein kinase regulatory ... 37 1.2
tr|Q5AHF3|Q5AHF3_CANAL Putative uncharacterized protein OS=Candi... 37 1.2
tr|Q2GDJ3|Q2GDJ3_NEOSM Cytochrome c-type biogenesis protein, Ccm... 36 1.6
tr|B8KXW7|B8KXW7_9GAMM Putative uncharacterized protein OS=gamma... 36 1.6
tr|B6KSW3|B6KSW3_TOXGO Putative uncharacterized protein OS=Toxop... 36 1.6
tr|B4QKD5|B4QKD5_DROSI GD13063 OS=Drosophila simulans GN=GD13063... 36 1.6

>tr|Q5B978|Q5B978_EMENI Putative uncharacterized protein OS=Emericella
nidulans GN=AN2902.2 PE=4 SV=1
Length = 829

Score = 44.7 bits (104), Expect = 0.004
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Frame = -2

Query: 499 TWMSASPVDKQKSPSLGLKGDDGSEQVQLGNSQEKQDSAEAEMRLQGKGYESDGDESTGC 320
+WM + + +P K +DG++ N+ + Q S E + + + STG
Sbjct: 678 SWMERNELPPTSNPDKKRKREDGTDNDNDENNSDTQGSGEVAGSRLSQRIKRSYERSTGL 737

Query: 319 EKTVNADLGQNDTKGTSGESKG-----AEVNFMPQLKFPETVQKRVIRAEDDNTW 170
++ +A G+N + +G + G AE + +P + FPET ++ D+++
Sbjct: 738 KEVASATSGENGSNTDTGTATGTDTDTAEADDVPDVAFPETEEEGAASRNPDSSY 792


>tr|A3Q2I5|A3Q2I5_MYCSJ Putative uncharacterized protein
OS=Mycobacterium sp. (strain JLS) GN=Mjls_3585 PE=3 SV=1
Length = 460

Score = 40.4 bits (93), Expect = 0.084
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = -2

Query: 574 VEELNHQKKGKK-EDTLHGFCRPGSNTWMSASPVDKQKSPSLGLKGDDGSEQVQLGNSQE 398
V+E++ Q+ + E + P + + P D + DDG++ V LG +
Sbjct: 335 VKEVSFQESAPEPEKIVAAVTDPDEEDDLDSEPTDSEPVDGT----DDGTDDVDLGGDTD 390

Query: 397 KQDSAEAEMRLQGKGYESD-GDESTGCEKTVNADLGQNDTKGTSGES 260
+ D ++ E + G + D GDE G ++ +A+ G +D GT+G++
Sbjct: 391 EGDDSDLEESVDVTGGDEDAGDEDGGEDEGADANDGGSDNGGTAGDN 437


>tr|Q1B5Z7|Q1B5Z7_MYCSS Putative uncharacterized protein
OS=Mycobacterium sp. (strain MCS) GN=Mmcs_3580 PE=3 SV=1
Length = 460

Score = 40.0 bits (92), Expect = 0.11
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = -2

Query: 574 VEELNHQKK-GKKEDTLHGFCRPGSNTWMSASPVDKQKSPSLGLKGDDGSEQVQLGNSQE 398
V+E+++Q+ + E + P + + P D + DDG++ V LG +
Sbjct: 335 VKEVSYQESVPEPEKIVAAVTDPDEEVDVVSEPTDSEPVDGT----DDGTDDVDLGGDTD 390

Query: 397 KQDSAEAEMRLQGKGYESD-GDESTGCEKTVNADLGQNDTKGTSGES 260
+ D ++ E + G + D GDE G ++ +A+ G +D GT+G++
Sbjct: 391 EGDDSDLEESVDVTGGDEDAGDEDGGEDEGADANDGGSDNGGTAGDN 437


>tr|A1UJ39|A1UJ39_MYCSK Putative uncharacterized protein
OS=Mycobacterium sp. (strain KMS) GN=Mkms_3653 PE=3 SV=1
Length = 460

Score = 40.0 bits (92), Expect = 0.11
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = -2

Query: 574 VEELNHQKK-GKKEDTLHGFCRPGSNTWMSASPVDKQKSPSLGLKGDDGSEQVQLGNSQE 398
V+E+++Q+ + E + P + + P D + DDG++ V LG +
Sbjct: 335 VKEVSYQESVPEPEKIVAAVTDPDEEVDVVSEPTDSEPVDGT----DDGTDDVDLGGDTD 390

Query: 397 KQDSAEAEMRLQGKGYESD-GDESTGCEKTVNADLGQNDTKGTSGES 260
+ D ++ E + G + D GDE G ++ +A+ G +D GT+G++
Sbjct: 391 EGDDSDLEESVDVTGGDEDAGDEDGGEDEGADANDGGSDNGGTAGDN 437


>tr|B5VHG7|B5VHG7_YEAS6 YER032Wp-like protein (Fragment)
OS=Saccharomyces cerevisiae (strain AWRI1631)
GN=AWRI1631_51040 PE=4 SV=1
Length = 578

Score = 38.5 bits (88), Expect = 0.32
Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 4/138 (2%)
Frame = -2

Query: 484 SPVDKQKSPSLGLKGDDGSEQVQLGNSQEKQDSAEAEMRLQGKGYESDGDESTGCEKTVN 305
SP +K K S + DG Q Q GN+ S E+ + Y + D V+
Sbjct: 216 SPQNKDKKRSSLVYDGDGYSQFQEGNTSS---STESSLEQPSSSYSDEDDSIPYAHHDVS 272

Query: 304 ADLGQNDTKGTSGESKGAEVNFMPQ---LKFPETVQKRVIR-AEDDNTWHLTLMKSNTTM 137
+L D G + A VN Q LK P+ ++ + R E+ NT
Sbjct: 273 FELNNADADKLLGIDENANVNLKIQRRNLKNPQHIKSKTDRECEEKNT------------ 320

Query: 136 SKLQEREISLKGLSTSPK 83
E+ +SLK LST K
Sbjct: 321 ----EKNVSLKILSTPNK 334


>tr|A6ZQY1|A6ZQY1_YEAS7 Factor interacting with ref2
OS=Saccharomyces cerevisiae (strain YJM789) GN=FIR1 PE=4
SV=1
Length = 876

Score = 38.5 bits (88), Expect = 0.32
Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 4/138 (2%)
Frame = -2

Query: 484 SPVDKQKSPSLGLKGDDGSEQVQLGNSQEKQDSAEAEMRLQGKGYESDGDESTGCEKTVN 305
SP +K K S + DG Q Q GN+ S E+ + Y + D V+
Sbjct: 245 SPQNKDKKRSSLVYDGDGYSQFQEGNTSS---STESSLEQPSSSYSDEDDSIPYAHHDVS 301

Query: 304 ADLGQNDTKGTSGESKGAEVNFMPQ---LKFPETVQKRVIR-AEDDNTWHLTLMKSNTTM 137
+L D G + A VN Q LK P+ ++ + R E+ NT
Sbjct: 302 FELNNADADKLLGIDENANVNLKIQRRNLKNPQHIKSKTDRECEEKNT------------ 349

Query: 136 SKLQEREISLKGLSTSPK 83
E+ +SLK LST K
Sbjct: 350 ----EKNVSLKILSTPNK 363


>tr|Q9ET15|Q9ET15_MOUSE Retinitis pigmentosa GTPase regulator
(Fragment) OS=Mus musculus GN=Rpgr PE=4 SV=1
Length = 538

Score = 38.1 bits (87), Expect = 0.42
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Frame = -2

Query: 613 QKFQDAGKKRKHLVEELNHQKKGKKEDTLHGFCRPGSNTWMSASPVDKQKSPSLGLKGDD 434
+K + G K K +E N +K+ K+ + + S +++ P G K +
Sbjct: 117 EKGSEGGDKMKR--DEGNQEKRKKEME------ERDAGDERSEEEEGEEEEPEEGEKEEG 168

Query: 433 GSEQVQLGNSQEKQDSA---EAEMRLQGKGYESDGDE--STGCEKTVNADLGQNDTKGTS 269
G E+ Q ++D E E R +GKG + DG E G E+ ++ + + +
Sbjct: 169 GEEEEGTSEDQSREDEGDRQEKEGRREGKGRQEDGREGWKEGEEQEQEEEIEEGEEEERE 228

Query: 268 GESKGAE 248
GE +G E
Sbjct: 229 GEEEGGE 235


>tr|B7U588|B7U588_BACSU Putative uncharacterized protein OS=Bacillus
subtilis GN=Bsb_11 PE=4 SV=1
Length = 842

Score = 38.1 bits (87), Expect = 0.42
Identities = 43/194 (22%), Positives = 83/194 (42%), Gaps = 11/194 (5%)
Frame = -2

Query: 589 KRKHLVEELNHQKKGKKEDTLHGFCRPGSNTWMSA-----SPVDKQKSPSLGLKGDDGSE 425
++ L ++L +KGK D L+ G ++ + S + +P+ LK + ++
Sbjct: 478 QKDQLDKQLKGAEKGKSPDALNSLNNKGLSSMQNKGNNIYSQKGTENTPN-ALK-EATND 535

Query: 424 QVQLGNSQEKQDSAEAEMRLQGKGYESDGDESTGCEKTVNADLGQNDTKGTSGESKGAEV 245
L + + + +AE +L G SD +E +G + ND+ +SG+S+ V
Sbjct: 536 VGDLKDMKNNNSALQAEQQLYGDSSHSDQNEQSGDSVNTTNSIDTNDSIDSSGDSERLPV 595

Query: 244 NFMPQLKFP-ETVQKRVIRAEDDNTWHLTLMKSNTTMSKLQEREISLKGLS-----TSPK 83
N + + P E + + + ++D + S T +K E S GL+ S
Sbjct: 596 NNVNDSEQPLEKMSQHEVDQDNDVKGIYSDNVSETDQTKNVESAASGAGLTNGSAVNSAS 655

Query: 82 NG*AMAGGREVDTA 41
G + G V++A
Sbjct: 656 GGAGLTNGSAVNSA 669


>tr|B4HTA2|B4HTA2_DROSE GM21729 OS=Drosophila sechellia GN=GM21729
PE=4 SV=1
Length = 663

Score = 38.1 bits (87), Expect = 0.42
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Frame = -2

Query: 505 SNTWMSASPVDK-QKSPSLGLKGDDGSEQVQLGNSQEKQDSAEAEMRLQGKGYESDGDES 329
SN A+ VDK +KSPS +K + + + NS++ ++++E + +G E DE
Sbjct: 77 SNPESDAAAVDKKEKSPSPAIKKSNNKDAKKEDNSEKDEENSEDGDEPEEEGDEKASDEE 136

Query: 328 TGCEK-TVNADLGQNDTKGTSGESKGAEVNFMPQLKFPETVQKRVIRAEDDN 176
+ +K ++A+ + D S GA+ P+ P+ +V + EDD+
Sbjct: 137 SEKKKPKLDAEDKKKDATDESKPKSGAD---KPKKPEPKAKNGKVAKEEDDD 185


>tr|B4DRS4|B4DRS4_HUMAN cDNA FLJ60139, highly similar to Homo
sapiens HIV TAT specific factor 1 (HTATSF1), mRNA
OS=Homo sapiens PE=2 SV=1
Length = 721

Score = 38.1 bits (87), Expect = 0.42
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Frame = -2

Query: 568 ELNHQKKGKKEDTLHGFCRPGSNTWMSASPVDKQKSPSLGL---KGDDGSEQVQLGNSQE 398
E + KK K+ TL C S ++K+ +G +D SE+ + E
Sbjct: 495 EEDSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSE 554

Query: 397 KQDSAEAEMRLQGKGYESDGDESTGCEK-----TVNADLGQNDTKGTSGESKGAE 248
KQ +E + G E D DE G EK ++ +L +ND++ + E G+E
Sbjct: 555 KQSEDGSEREFEENGLEKDLDEE-GSEKELHENVLDKELEENDSENSEFEDDGSE 608