BP920069 |
Clone id |
YMU001_000132_F08 |
Library |
YMU01 |
Length |
472 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000132_F08. |
Accession |
BP920069 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CATCCTTAACCATTTTGTTAGGAGAATCATCTTTATCCAAGTCATTGGATTCTGCATGTT GCATCCCAACATCGTTATCATGTAAATCCTTATTTATGGCCGTAGATCCACTCGAGGAAG ACGTTGCTTGGTGAGCCTTTCATTTGGTCTATTTACGCTTAGCGGCAAAAGACTTGATAC ACCATAAATAAATATCCTCCTCCTTCCAAGGATAAGAAGCTCCATCTATGACAATGTCTT TGAGTTTGCCTATGTTGTCTCCAATGATGCTCATAACTTGATTCTTTCGTTCAAGTTTGT CTCCAAGGTCACCAATAGAATTAACTTTTGCAAACCATTTTCCCACCTCCCCGTAGTTAG AATATAACACTCTATATTGATCCGGATGATGCTTCACAAGAAAATTTCTACCATAAAGCT TCCCTGCATCTCTATGTGTGGAAGGTGGAGGTCTAAACACCTGGTCATATAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8D370 |
Definition |
sp|Q8D370|PYRD_WIGBR Dihydroorotate dehydrogenase OS=Wigglesworthia glossinidia brevipalpis |
Align length |
60 |
Score (bit) |
37.0 |
E-value |
0.044 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A4X6W0 |
Definition |
tr|A4X6W0|A4X6W0_SALTO Peptidase M20 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) |
Align length |
52 |
Score (bit) |
39.3 |
E-value |
0.099 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920069|Adiantum capillus-veneris mRNA, clone: YMU001_000132_F08. (472 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A4X6W0|A4X6W0_SALTO Peptidase M20 OS=Salinispora tropica (str... 39 0.099 tr|B6FKC9|B6FKC9_9CLOT Putative uncharacterized protein OS=Clost... 35 1.9 tr|A0A9J3|A0A9J3_XENLA Cyclooxygenase 1 OS=Xenopus laevis GN=ptg... 35 2.4 tr|B7BVQ4|B7BVQ4_9FIRM Putative uncharacterized protein OS=Roseb... 33 5.4 tr|B7AND4|B7AND4_9BACE Putative uncharacterized protein OS=Bacte... 33 5.4 tr|B4CXG6|B4CXG6_9BACT Putative uncharacterized protein OS=Chtho... 33 5.4 tr|A9BKJ9|A9BKJ9_9CRYP Putative uncharacterized protein OS=Crypt... 33 5.4 tr|B6HNE1|B6HNE1_PENCH Pc21g17990 protein OS=Penicillium chrysog... 33 5.4 tr|B7ZRV2|B7ZRV2_XENLA Cyclooxygenase 1 OS=Xenopus laevis GN=cox... 33 7.1 tr|Q3KCX0|Q3KCX0_PSEPF Putative uncharacterized protein OS=Pseud... 33 7.1 tr|B3PIF7|B3PIF7_CELJU RHS Repeat family OS=Cellvibrio japonicus... 33 7.1 tr|O62026|O62026_CAEEL Protein C04H5.3, partially confirmed by t... 33 7.1 tr|A8WZK0|A8WZK0_CAEBR Putative uncharacterized protein OS=Caeno... 33 7.1 tr|A2RB02|A2RB02_ASPNC Remark: a splice site was detected upstre... 33 7.1 tr|A5ZI50|A5ZI50_9BACE Putative uncharacterized protein OS=Bacte... 33 9.3 tr|B6SZV0|B6SZV0_MAIZE Nucleic acid binding protein OS=Zea mays ... 33 9.3 tr|B4FCH4|B4FCH4_MAIZE Putative uncharacterized protein OS=Zea m... 33 9.3
>tr|A4X6W0|A4X6W0_SALTO Peptidase M20 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=Strop_2159 PE=4 SV=1 Length = 442
Score = 39.3 bits (90), Expect = 0.099 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 6/52 (11%) Frame = -1
Query: 457 FRPPP------STHRDAGKLYGRNFLVKHHPDQYRVLYSNYGEVGKWFAKVN 320 FRPP + +AG YG +FLV+HHPD + GEVG + VN Sbjct: 141 FRPPRDVVLAFTADEEAGSDYGAHFLVEHHPDLFAGCTEGIGEVGGFSYSVN 192
>tr|B6FKC9|B6FKC9_9CLOT Putative uncharacterized protein OS=Clostridium nexile DSM 1787 GN=CLONEX_00575 PE=4 SV=1 Length = 394
Score = 35.0 bits (79), Expect = 1.9 Identities = 23/72 (31%), Positives = 39/72 (54%) Frame = -1
Query: 409 RNFLVKHHPDQYRVLYSNYGEVGKWFAKVNSIGDLGDKLERKNQVMSIIGDNIGKLKDIV 230 R LVK + D+ ++ S E+ K ++I L D +E+K++ M +GD I L+D + Sbjct: 183 RERLVKENQDKDALINSQQNELNK---ASSTIARLRDDIEKKDKEMKRMGDRIESLEDKI 239
Query: 229 IDGASYPWKEED 194 I A+ KE + Sbjct: 240 ISVATENKKEAE 251
>tr|A0A9J3|A0A9J3_XENLA Cyclooxygenase 1 OS=Xenopus laevis GN=ptgs1 PE=2 SV=1 Length = 587
Score = 34.7 bits (78), Expect = 2.4 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 5/70 (7%) Frame = -1
Query: 403 FLVKHHPDQYRVLYSNYGEVGKWFAKVNSIG-DL----GDKLERKNQVMSIIGDNIGKLK 239 F +H Q+ + YG +G+ F K G DL GD LER+ Q++ + D GKLK Sbjct: 192 FFAQHFTHQF---FKTYGRMGRGFIKGFGHGVDLSHIYGDSLERQ-QILRLFKD--GKLK 245
Query: 238 DIVIDGASYP 209 +I+G +YP Sbjct: 246 YQIINGETYP 255
>tr|B7BVQ4|B7BVQ4_9FIRM Putative uncharacterized protein OS=Roseburia intestinalis L1-82 GN=ROSINTL182_00832 PE=4 SV=1 Length = 394
Score = 33.5 bits (75), Expect = 5.4 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = -1
Query: 409 RNFLVKHHPDQYRVLYSNYGEVGKWFAKVNSIGDLGDKLERKNQVMSIIGDNIGKLKDIV 230 R LVK + D+ ++ S E+ K ++I L D +E+K++ + +GD I L+D + Sbjct: 183 RERLVKENQDKDALINSQQNELNK---ASSTIARLRDDIEKKDKEIKRMGDRIESLEDKI 239
Query: 229 IDGASYPWKEED 194 I A+ KE + Sbjct: 240 ISVATENKKEAE 251
>tr|B7AND4|B7AND4_9BACE Putative uncharacterized protein OS=Bacteroides pectinophilus ATCC 43243 GN=BACPEC_00188 PE=4 SV=1 Length = 394
Score = 33.5 bits (75), Expect = 5.4 Identities = 21/65 (32%), Positives = 36/65 (55%) Frame = -1
Query: 409 RNFLVKHHPDQYRVLYSNYGEVGKWFAKVNSIGDLGDKLERKNQVMSIIGDNIGKLKDIV 230 R LVK + D+ ++ S E+ K ++I L D +E+K++ M +GD I L+D + Sbjct: 183 RERLVKENQDKDALINSQQNELNK---ASSTIARLRDDIEKKDKEMKRMGDRIESLEDKI 239
Query: 229 IDGAS 215 I A+ Sbjct: 240 ISVAT 244
>tr|B4CXG6|B4CXG6_9BACT Putative uncharacterized protein OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_1257 PE=3 SV=1 Length = 931
Score = 33.5 bits (75), Expect = 5.4 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 16/75 (21%) Frame = -1
Query: 472 IYDQVFRPPPSTHRDAGKLYGRNFLVKHHPDQYR----------------VLYSNYGEVG 341 ++++ +PPP D + G+N V+ +Q+R + NY +G Sbjct: 768 LWNEPAKPPPPNAGDLPAIKGKNLTVRERLEQHRNSASCASCHARLDPFGIALENYDAIG 827
Query: 340 KWFAKVNSIGDLGDK 296 KW + N G GD+ Sbjct: 828 KWRDRQNGEGMRGDE 842
>tr|A9BKJ9|A9BKJ9_9CRYP Putative uncharacterized protein OS=Cryptophyta GN=HAN_2g354 PE=4 SV=1 Length = 249
Score = 33.5 bits (75), Expect = 5.4 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +2
Query: 203 LPRIRSSIYDNVFEFAYVVSNDAHNLILSFKFVSKVTNRINF 328 LP I +DN+F F ++ N ++ FK SK+ NR++F Sbjct: 159 LPFILILKWDNLFRFFFLKKNKNFGKLIKFKIFSKIINRLSF 200
>tr|B6HNE1|B6HNE1_PENCH Pc21g17990 protein OS=Penicillium chrysogenum Wisconsin 54-1255 GN=Pc21g17990 PE=4 SV=1 Length = 631
Score = 33.5 bits (75), Expect = 5.4 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -2
Query: 210 LGRRRIFIYGVSSLLPLSVNRPNERLTKQRLPRVDL 103 LGR R+ ++G ++L P NRP R Q+ PR DL Sbjct: 353 LGRSRVVLHGATALCP--TNRPQSRNPPQQAPRADL 386
>tr|B7ZRV2|B7ZRV2_XENLA Cyclooxygenase 1 OS=Xenopus laevis GN=cox1 PE=2 SV=1 Length = 587
Score = 33.1 bits (74), Expect = 7.1 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 5/70 (7%) Frame = -1
Query: 403 FLVKHHPDQYRVLYSNYGEVGKWFAKVNSIG-DL----GDKLERKNQVMSIIGDNIGKLK 239 F +H Q+ + YG +G+ F K G DL GD LER++ ++ + D GKLK Sbjct: 192 FFAQHFTHQF---FKTYGRMGRGFIKGFGHGVDLSHIYGDSLERQH-ILRLFKD--GKLK 245
Query: 238 DIVIDGASYP 209 +I+G +YP Sbjct: 246 YQIINGETYP 255
>tr|Q3KCX0|Q3KCX0_PSEPF Putative uncharacterized protein OS=Pseudomonas fluorescens (strain Pf0-1) GN=Pf01_2644 PE=4 SV=1 Length = 1288
Score = 33.1 bits (74), Expect = 7.1 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%) Frame = +2
Query: 134 SLSFGLFTLSGKRLDTP*INI--LLLPRIRSSIYDNVFEFAYV 256 S++ L TL+GKR DT I++ +PR+ + +DN EFA V Sbjct: 35 SIASSLSTLAGKRPDTELIDLRDTTVPRLSGTTFDNALEFARV 77
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