BP920069
Clone id YMU001_000132_F08
Library
Length 472
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000132_F08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CATCCTTAACCATTTTGTTAGGAGAATCATCTTTATCCAAGTCATTGGATTCTGCATGTT
GCATCCCAACATCGTTATCATGTAAATCCTTATTTATGGCCGTAGATCCACTCGAGGAAG
ACGTTGCTTGGTGAGCCTTTCATTTGGTCTATTTACGCTTAGCGGCAAAAGACTTGATAC
ACCATAAATAAATATCCTCCTCCTTCCAAGGATAAGAAGCTCCATCTATGACAATGTCTT
TGAGTTTGCCTATGTTGTCTCCAATGATGCTCATAACTTGATTCTTTCGTTCAAGTTTGT
CTCCAAGGTCACCAATAGAATTAACTTTTGCAAACCATTTTCCCACCTCCCCGTAGTTAG
AATATAACACTCTATATTGATCCGGATGATGCTTCACAAGAAAATTTCTACCATAAAGCT
TCCCTGCATCTCTATGTGTGGAAGGTGGAGGTCTAAACACCTGGTCATATAT
■■Homology search results ■■ -
sp_hit_id Q8D370
Definition sp|Q8D370|PYRD_WIGBR Dihydroorotate dehydrogenase OS=Wigglesworthia glossinidia brevipalpis
Align length 60
Score (bit) 37.0
E-value 0.044
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920069|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_F08.
(472 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8D370|PYRD_WIGBR Dihydroorotate dehydrogenase OS=Wiggleswort... 37 0.044
sp|P23219|PGH1_HUMAN Prostaglandin G/H synthase 1 OS=Homo sapien... 31 2.4
sp|Q79PF6|KAIA_SYNE7 Circadian clock protein kaiA OS=Synechococc... 30 4.2
sp|Q6CQR6|MRD1_KLULA Multiple RNA-binding domain-containing prot... 30 5.4
sp|P44052|Y787_HAEIN Uncharacterized protein HI0787 OS=Haemophil... 30 7.1
sp|Q9Y7Z1|NOP16_SCHPO Nucleolar protein 16 OS=Schizosaccharomyce... 30 7.1
sp|Q6CEW9|MRD1_YARLI Multiple RNA-binding domain-containing prot... 30 7.1
sp|A7GG76|Y2551_CLOBL UPF0348 protein CLI_2551 OS=Clostridium bo... 29 9.3
sp|A5I4R8|Y2491_CLOBH UPF0348 protein CBO2491/CLC_2345 OS=Clostr... 29 9.3
sp|A7FW56|Y2363_CLOB1 UPF0348 protein CLB_2363 OS=Clostridium bo... 29 9.3
sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containi... 29 9.3

>sp|Q8D370|PYRD_WIGBR Dihydroorotate dehydrogenase OS=Wigglesworthia
glossinidia brevipalpis GN=pyrD PE=3 SV=1
Length = 337

Score = 37.0 bits (84), Expect = 0.044
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = -1

Query: 355 YGEVGKWFAKVNSIGDLGDKLERKNQVMSIIGDNIGKLKDIVIDGASYPWKEEDIYLWCI 176
YG + + N I +L + ++ + V SI+G NIGK KD +I+ K +D YL CI
Sbjct: 107 YGIINRMGFNNNGIENLIENIKNEKNVKSILGINIGKNKDTLIE------KAKDDYLICI 160


>sp|P23219|PGH1_HUMAN Prostaglandin G/H synthase 1 OS=Homo sapiens
GN=PTGS1 PE=1 SV=1
Length = 599

Score = 31.2 bits (69), Expect = 2.4
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = -1

Query: 403 FLVKHHPDQYRVLYSNYGEVGKWFAKVNSIG-DLG----DKLERKNQVMSIIGDNIGKLK 239
F +H Q+ + G++G F K G DLG D LER+ Q + + D GKLK
Sbjct: 199 FFAQHFTHQF---FKTSGKMGPGFTKALGHGVDLGHIYGDNLERQYQ-LRLFKD--GKLK 252

Query: 238 DIVIDGASYPWKEED 194
V+DG YP E+
Sbjct: 253 YQVLDGEMYPPSVEE 267


>sp|Q79PF6|KAIA_SYNE7 Circadian clock protein kaiA OS=Synechococcus
elongatus (strain PCC 7942) GN=kaiA PE=1 SV=1
Length = 284

Score = 30.4 bits (67), Expect = 4.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1

Query: 379 DPDDASQENFYHKASLHLYVWKVE 450
DPD+ ++E YH A LHL + ++E
Sbjct: 89 DPDEPAKEQLYHSAELHLGIHQLE 112


>sp|Q6CQR6|MRD1_KLULA Multiple RNA-binding domain-containing protein
1 OS=Kluyveromyces lactis GN=MRD1 PE=3 SV=1
Length = 878

Score = 30.0 bits (66), Expect = 5.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1

Query: 433 RDAGKLYGRNFLVKHHPDQYRVLYSNYGEV 344
R+ G+L+ RN L D +R L+S YGE+
Sbjct: 327 RETGRLFLRNILYTATEDDFRKLFSPYGEL 356


>sp|P44052|Y787_HAEIN Uncharacterized protein HI0787 OS=Haemophilus
influenzae GN=HI0787 PE=4 SV=1
Length = 201

Score = 29.6 bits (65), Expect = 7.1
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = -1

Query: 415 YGRNFLVKHHPDQYRVLYSNYGEVGKWFAKVNSIGDLGDKLERKNQVMSIIGDNIGKLKD 236
+ + H+P + + S +V +F KV+ +RK+ N K K+
Sbjct: 122 FATKYCSHHNPIAFPIYDSYVEQVLLYFNKVDKFS----AFKRKDL------KNYRKFKE 171

Query: 235 IVIDGASYPWKEEDIYLWCI 176
++ID + KE D+YLW +
Sbjct: 172 VLIDFQRFNLKELDLYLWLL 191


>sp|Q9Y7Z1|NOP16_SCHPO Nucleolar protein 16 OS=Schizosaccharomyces
pombe GN=nop16 PE=2 SV=1
Length = 209

Score = 29.6 bits (65), Expect = 7.1
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = -1

Query: 448 PPSTHRDAGK-----LYGRNFLVKHHPDQYRVLYSNYGEVGKWFAKVNSIGDLGDKL--- 293
P T R+A K +YG NF+++ + D++ L NY +G A N + +KL
Sbjct: 15 PRLTRRNANKKAKAKIYG-NFVIQQNWDKHATLRQNYARLG-LLATPNYVTGGVEKLYPD 72

Query: 292 -ERKNQVMSIIGDNIGKLKDIVIDGASYPWKEED 194
+R+N+ + + + +LK + G + +++D
Sbjct: 73 PKRENEDRELTSEELDELKKSLPPGQAIVRRDDD 106


>sp|Q6CEW9|MRD1_YARLI Multiple RNA-binding domain-containing protein
1 OS=Yarrowia lipolytica GN=MRD1 PE=3 SV=1
Length = 828

Score = 29.6 bits (65), Expect = 7.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1

Query: 433 RDAGKLYGRNFLVKHHPDQYRVLYSNYGEVGKWFAKVNS 317
R G+L+ RN L + +R L+S YGE+ + +N+
Sbjct: 298 RKTGRLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINT 336


>sp|A7GG76|Y2551_CLOBL UPF0348 protein CLI_2551 OS=Clostridium
botulinum (strain Langeland / NCTC 10281 / Type F)
GN=CLI_2551 PE=3 SV=1
Length = 409

Score = 29.3 bits (64), Expect = 9.3
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -1

Query: 385 PDQYRVLYSNYGEVGKWFAKVNSIGDLGDKLERKNQVMSIIGDNIGKL 242
P +Y++L NY + G FAK ++ + +L R N++MS +NI K+
Sbjct: 122 PLEYKILLKNYLDKGISFAKARNLALV--ELNRDNKIMS---ENISKI 164


>sp|A5I4R8|Y2491_CLOBH UPF0348 protein CBO2491/CLC_2345
OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC
13319 / Type A) GN=CBO2491 PE=3 SV=1
Length = 409

Score = 29.3 bits (64), Expect = 9.3
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -1

Query: 385 PDQYRVLYSNYGEVGKWFAKVNSIGDLGDKLERKNQVMSIIGDNIGKL 242
P +Y++L NY + G FAK ++ + +L R N++MS +NI K+
Sbjct: 122 PLEYKILLKNYLDKGISFAKARNLALV--ELNRDNKIMS---ENINKI 164


>sp|A7FW56|Y2363_CLOB1 UPF0348 protein CLB_2363 OS=Clostridium
botulinum (strain ATCC 19397 / Type A) GN=CLB_2363 PE=3
SV=1
Length = 409

Score = 29.3 bits (64), Expect = 9.3
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -1

Query: 385 PDQYRVLYSNYGEVGKWFAKVNSIGDLGDKLERKNQVMSIIGDNIGKL 242
P +Y++L NY + G FAK ++ + +L R N++MS +NI K+
Sbjct: 122 PLEYKILLKNYLDKGISFAKARNLALV--ELNRDNKIMS---ENINKI 164


tr_hit_id A4X6W0
Definition tr|A4X6W0|A4X6W0_SALTO Peptidase M20 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
Align length 52
Score (bit) 39.3
E-value 0.099
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920069|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_F08.
(472 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4X6W0|A4X6W0_SALTO Peptidase M20 OS=Salinispora tropica (str... 39 0.099
tr|B6FKC9|B6FKC9_9CLOT Putative uncharacterized protein OS=Clost... 35 1.9
tr|A0A9J3|A0A9J3_XENLA Cyclooxygenase 1 OS=Xenopus laevis GN=ptg... 35 2.4
tr|B7BVQ4|B7BVQ4_9FIRM Putative uncharacterized protein OS=Roseb... 33 5.4
tr|B7AND4|B7AND4_9BACE Putative uncharacterized protein OS=Bacte... 33 5.4
tr|B4CXG6|B4CXG6_9BACT Putative uncharacterized protein OS=Chtho... 33 5.4
tr|A9BKJ9|A9BKJ9_9CRYP Putative uncharacterized protein OS=Crypt... 33 5.4
tr|B6HNE1|B6HNE1_PENCH Pc21g17990 protein OS=Penicillium chrysog... 33 5.4
tr|B7ZRV2|B7ZRV2_XENLA Cyclooxygenase 1 OS=Xenopus laevis GN=cox... 33 7.1
tr|Q3KCX0|Q3KCX0_PSEPF Putative uncharacterized protein OS=Pseud... 33 7.1
tr|B3PIF7|B3PIF7_CELJU RHS Repeat family OS=Cellvibrio japonicus... 33 7.1
tr|O62026|O62026_CAEEL Protein C04H5.3, partially confirmed by t... 33 7.1
tr|A8WZK0|A8WZK0_CAEBR Putative uncharacterized protein OS=Caeno... 33 7.1
tr|A2RB02|A2RB02_ASPNC Remark: a splice site was detected upstre... 33 7.1
tr|A5ZI50|A5ZI50_9BACE Putative uncharacterized protein OS=Bacte... 33 9.3
tr|B6SZV0|B6SZV0_MAIZE Nucleic acid binding protein OS=Zea mays ... 33 9.3
tr|B4FCH4|B4FCH4_MAIZE Putative uncharacterized protein OS=Zea m... 33 9.3

>tr|A4X6W0|A4X6W0_SALTO Peptidase M20 OS=Salinispora tropica (strain
ATCC BAA-916 / DSM 44818 / CNB-440) GN=Strop_2159 PE=4
SV=1
Length = 442

Score = 39.3 bits (90), Expect = 0.099
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Frame = -1

Query: 457 FRPPP------STHRDAGKLYGRNFLVKHHPDQYRVLYSNYGEVGKWFAKVN 320
FRPP + +AG YG +FLV+HHPD + GEVG + VN
Sbjct: 141 FRPPRDVVLAFTADEEAGSDYGAHFLVEHHPDLFAGCTEGIGEVGGFSYSVN 192


>tr|B6FKC9|B6FKC9_9CLOT Putative uncharacterized protein
OS=Clostridium nexile DSM 1787 GN=CLONEX_00575 PE=4 SV=1
Length = 394

Score = 35.0 bits (79), Expect = 1.9
Identities = 23/72 (31%), Positives = 39/72 (54%)
Frame = -1

Query: 409 RNFLVKHHPDQYRVLYSNYGEVGKWFAKVNSIGDLGDKLERKNQVMSIIGDNIGKLKDIV 230
R LVK + D+ ++ S E+ K ++I L D +E+K++ M +GD I L+D +
Sbjct: 183 RERLVKENQDKDALINSQQNELNK---ASSTIARLRDDIEKKDKEMKRMGDRIESLEDKI 239

Query: 229 IDGASYPWKEED 194
I A+ KE +
Sbjct: 240 ISVATENKKEAE 251


>tr|A0A9J3|A0A9J3_XENLA Cyclooxygenase 1 OS=Xenopus laevis GN=ptgs1
PE=2 SV=1
Length = 587

Score = 34.7 bits (78), Expect = 2.4
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = -1

Query: 403 FLVKHHPDQYRVLYSNYGEVGKWFAKVNSIG-DL----GDKLERKNQVMSIIGDNIGKLK 239
F +H Q+ + YG +G+ F K G DL GD LER+ Q++ + D GKLK
Sbjct: 192 FFAQHFTHQF---FKTYGRMGRGFIKGFGHGVDLSHIYGDSLERQ-QILRLFKD--GKLK 245

Query: 238 DIVIDGASYP 209
+I+G +YP
Sbjct: 246 YQIINGETYP 255


>tr|B7BVQ4|B7BVQ4_9FIRM Putative uncharacterized protein
OS=Roseburia intestinalis L1-82 GN=ROSINTL182_00832 PE=4
SV=1
Length = 394

Score = 33.5 bits (75), Expect = 5.4
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = -1

Query: 409 RNFLVKHHPDQYRVLYSNYGEVGKWFAKVNSIGDLGDKLERKNQVMSIIGDNIGKLKDIV 230
R LVK + D+ ++ S E+ K ++I L D +E+K++ + +GD I L+D +
Sbjct: 183 RERLVKENQDKDALINSQQNELNK---ASSTIARLRDDIEKKDKEIKRMGDRIESLEDKI 239

Query: 229 IDGASYPWKEED 194
I A+ KE +
Sbjct: 240 ISVATENKKEAE 251


>tr|B7AND4|B7AND4_9BACE Putative uncharacterized protein
OS=Bacteroides pectinophilus ATCC 43243 GN=BACPEC_00188
PE=4 SV=1
Length = 394

Score = 33.5 bits (75), Expect = 5.4
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = -1

Query: 409 RNFLVKHHPDQYRVLYSNYGEVGKWFAKVNSIGDLGDKLERKNQVMSIIGDNIGKLKDIV 230
R LVK + D+ ++ S E+ K ++I L D +E+K++ M +GD I L+D +
Sbjct: 183 RERLVKENQDKDALINSQQNELNK---ASSTIARLRDDIEKKDKEMKRMGDRIESLEDKI 239

Query: 229 IDGAS 215
I A+
Sbjct: 240 ISVAT 244


>tr|B4CXG6|B4CXG6_9BACT Putative uncharacterized protein
OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_1257
PE=3 SV=1
Length = 931

Score = 33.5 bits (75), Expect = 5.4
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 16/75 (21%)
Frame = -1

Query: 472 IYDQVFRPPPSTHRDAGKLYGRNFLVKHHPDQYR----------------VLYSNYGEVG 341
++++ +PPP D + G+N V+ +Q+R + NY +G
Sbjct: 768 LWNEPAKPPPPNAGDLPAIKGKNLTVRERLEQHRNSASCASCHARLDPFGIALENYDAIG 827

Query: 340 KWFAKVNSIGDLGDK 296
KW + N G GD+
Sbjct: 828 KWRDRQNGEGMRGDE 842


>tr|A9BKJ9|A9BKJ9_9CRYP Putative uncharacterized protein
OS=Cryptophyta GN=HAN_2g354 PE=4 SV=1
Length = 249

Score = 33.5 bits (75), Expect = 5.4
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2

Query: 203 LPRIRSSIYDNVFEFAYVVSNDAHNLILSFKFVSKVTNRINF 328
LP I +DN+F F ++ N ++ FK SK+ NR++F
Sbjct: 159 LPFILILKWDNLFRFFFLKKNKNFGKLIKFKIFSKIINRLSF 200


>tr|B6HNE1|B6HNE1_PENCH Pc21g17990 protein OS=Penicillium
chrysogenum Wisconsin 54-1255 GN=Pc21g17990 PE=4 SV=1
Length = 631

Score = 33.5 bits (75), Expect = 5.4
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2

Query: 210 LGRRRIFIYGVSSLLPLSVNRPNERLTKQRLPRVDL 103
LGR R+ ++G ++L P NRP R Q+ PR DL
Sbjct: 353 LGRSRVVLHGATALCP--TNRPQSRNPPQQAPRADL 386


>tr|B7ZRV2|B7ZRV2_XENLA Cyclooxygenase 1 OS=Xenopus laevis GN=cox1
PE=2 SV=1
Length = 587

Score = 33.1 bits (74), Expect = 7.1
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = -1

Query: 403 FLVKHHPDQYRVLYSNYGEVGKWFAKVNSIG-DL----GDKLERKNQVMSIIGDNIGKLK 239
F +H Q+ + YG +G+ F K G DL GD LER++ ++ + D GKLK
Sbjct: 192 FFAQHFTHQF---FKTYGRMGRGFIKGFGHGVDLSHIYGDSLERQH-ILRLFKD--GKLK 245

Query: 238 DIVIDGASYP 209
+I+G +YP
Sbjct: 246 YQIINGETYP 255


>tr|Q3KCX0|Q3KCX0_PSEPF Putative uncharacterized protein
OS=Pseudomonas fluorescens (strain Pf0-1) GN=Pf01_2644
PE=4 SV=1
Length = 1288

Score = 33.1 bits (74), Expect = 7.1
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2

Query: 134 SLSFGLFTLSGKRLDTP*INI--LLLPRIRSSIYDNVFEFAYV 256
S++ L TL+GKR DT I++ +PR+ + +DN EFA V
Sbjct: 35 SIASSLSTLAGKRPDTELIDLRDTTVPRLSGTTFDNALEFARV 77