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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920048
Clone id YMU001_000132_D11
Library
Length 495
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000132_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTCTTGTTTCACTACTATACATAATCATTTCAATTATCTGCTCTTCCCCTTCACAGA
ATTTAGGGGGAGCACAACAAATAGTCTGTCTTTGAGGACACTGTATCAATAACATGAATG
GTGCATGGTCTGCACTTGTACAGTGTCCTTCCGCAAATCAACATCCTCGGGAATTACCTT
ACAAGTTGGTACTCAACAGAGCAGCACAAGGCTCTTGAACAAAACTTTCCTACACTCGGG
TACCCATTGGAAAGTTACATGTACTTCCGATGCAGCCTCTTCCTCCCCCTCCACAAAAGG
GTTCTTTCTCGCAGTTAGTAGAATATACTTCTACAACGAGCCTACCACAGCACAAGAAGA
TGCAGAACATTAGTCATACACCAGCTCAGCGCATCGCCGTAGCACCTGATTGGACACATA
TGGAGTCTCTTTGGCCAATCCCAGCTCCTCTCTGTGGTACAGTATAAACAGTTCCACCTG
CACGGATTGCGTGCG
■■Homology search results ■■ -
sp_hit_id P53832
Definition sp|P53832|WSC2_YEAST Cell wall integrity and stress response component 2 OS=Saccharomyces cerevisiae
Align length 109
Score (bit) 32.7
E-value 0.93
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920048|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_D11.
         (495 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P53832|WSC2_YEAST Cell wall integrity and stress response com...    33   0.93 
sp|Q4R736|SPT21_MACFA Spermatogenesis-associated protein 21 OS=M...    32   2.1  
sp|Q22017|FLAD1_CAEEL Probable FAD synthetase OS=Caenorhabditis ...    32   2.1  
sp|Q626I0|FLAD1_CAEBR Probable FAD synthetase OS=Caenorhabditis ...    32   2.1  
sp|Q7Z572|SPT21_HUMAN Spermatogenesis-associated protein 21 OS=H...    30   4.6  
sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=...    30   4.6  
sp|Q55C49|GTAG_DICDI GATA zinc finger domain-containing protein ...    30   6.0  
sp|Q48AU1|RIMN_COLP3 Putative ribosome maturation factor rimN OS...    30   7.9  
sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B ...    30   7.9  

>sp|P53832|WSC2_YEAST Cell wall integrity and stress response
           component 2 OS=Saccharomyces cerevisiae GN=WSC2 PE=1
           SV=1
          Length = 503

 Score = 32.7 bits (73), Expect = 0.93
 Identities = 33/109 (30%), Positives = 48/109 (44%)
 Frame = +2

Query: 158 STSSGITLQVGTQQSSTRLLNKTFLHSGTHWKVTCTSDAASSSPSTKGFFLAVSRIYFYN 337
           STSS  T    T  SST + +KT     T    + ++  +SSS ST       S     +
Sbjct: 125 STSSTATSTSTTSSSSTSVSSKTSTKLDTKTSTSSSATHSSSSSST------TSTTTSSS 178

Query: 338 EPTTAQEDAEH*SYTSSAHRRST*LDTYGVSLANPSSSLWYSINSSTCT 484
           E TT+   +   S TS+    ST   T   S +  ++S   S +SS+ T
Sbjct: 179 ETTTSSSSSSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSSSET 227


>sp|Q4R736|SPT21_MACFA Spermatogenesis-associated protein 21
           OS=Macaca fascicularis GN=SPATA21 PE=2 SV=1
          Length = 696

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +3

Query: 327 TSTTSLPQHKKMQNISHTPAQRIAVAPDWTHMESLWPIPAPLCGTV*TVPPARI 488
           TS+ SLPQ         TPA   A  P W  + +  P PAP+  +V T  P  +
Sbjct: 348 TSSPSLPQ---------TPASAPASGPSWARLSAPGPEPAPVGASVPTSTPCPV 392


>sp|Q22017|FLAD1_CAEEL Probable FAD synthetase OS=Caenorhabditis
           elegans GN=R53.1 PE=2 SV=1
          Length = 519

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -2

Query: 473 NCLYCTTERSW---DWPKRLHMCPIRCYGDALSWCMTNVLHLL 354
           N  Y  T   W   DWP+ L +CPI      L+W  T+V H+L
Sbjct: 423 NGKYMKTPVEWTDSDWPQVLRVCPI------LNWTYTDVWHML 459


>sp|Q626I0|FLAD1_CAEBR Probable FAD synthetase OS=Caenorhabditis
           briggsae GN=CBG00973 PE=3 SV=1
          Length = 523

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -2

Query: 473 NCLYCTTERSW---DWPKRLHMCPIRCYGDALSWCMTNVLHLL 354
           N  Y  T   W   DWPK L +CPI      L+W  ++V H+L
Sbjct: 427 NGKYMKTPVEWTDSDWPKVLRVCPI------LNWTYSDVWHML 463


>sp|Q7Z572|SPT21_HUMAN Spermatogenesis-associated protein 21 OS=Homo
           sapiens GN=SPATA21 PE=2 SV=3
          Length = 469

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +3

Query: 309 SQLVEYTSTTSLPQHKKMQNISHTPAQRIAVAPDWTHMESLWPIPAPLCGTV*TVPPARI 488
           SQ  + +  T  P      ++  TPA   A  P W  + +  P PAP+   V T  P  +
Sbjct: 107 SQTAQKSPRTLTPVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPV 166


>sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein
           OS=Xenopus tropicalis GN=epabp PE=2 SV=1
          Length = 629

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = +3

Query: 300 GSFSQLVEYTSTTSLPQHKKMQNISHTPAQRIAVAPDWTHMESLWPIPAPLCGTV*TVPP 479
           GSF Q   Y    ++PQ       S  P   +  AP WT  +S  P   P    +  VPP
Sbjct: 398 GSFQQPANYF-LPAMPQPPNRTFYSPNPVAPVRQAPQWTSHQSRPPQYQPPAPLMRAVPP 456

Query: 480 ARIA 491
            R++
Sbjct: 457 RRMS 460


>sp|Q55C49|GTAG_DICDI GATA zinc finger domain-containing protein 7
            OS=Dictyostelium discoideum GN=gtaG PE=4 SV=1
          Length = 1006

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
 Frame = +2

Query: 194  QQSSTRLLNKTFLHSGTHWKVTCTSDAASSSPSTKGFFLAVSRIYFYNEPTTAQEDAEH* 373
            Q+     L+K  LHS ++         +  +PS    F   + + + N P  A   +   
Sbjct: 875  QREEETNLHKLLLHSNSYSYHRGNMLESYVTPSLLPLFNTAANVPYLNTPNNASSSSSSS 934

Query: 374  SYTSSAHRRST*LDTYGVSLAN-PSSSLWYSINSST 478
            S +SS+   S+   +Y  S  N P+++  Y+  S+T
Sbjct: 935  SSSSSSSSSSSSTSSYSSSSYNIPNTNTQYNTTSAT 970


>sp|Q48AU1|RIMN_COLP3 Putative ribosome maturation factor rimN
           OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
           GN=rimN PE=3 SV=1
          Length = 183

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 300 GSFSQLVEYTSTTSLPQHKKMQNISHTPAQRIAVAPDWTHMESL 431
           GS+SQL+ Y   + +PQ K++  +S  P     + P   ++ SL
Sbjct: 56  GSYSQLLPYIDDSKIPQDKRLTLLSRWPDGITQLVPKNNNISSL 99


>sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B
           OS=Xenopus laevis GN=epabp-B PE=2 SV=1
          Length = 629

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 20/63 (31%), Positives = 25/63 (39%)
 Frame = +3

Query: 300 GSFSQLVEYTSTTSLPQHKKMQNISHTPAQRIAVAPDWTHMESLWPIPAPLCGTV*TVPP 479
           GSF Q   Y   T +PQ       S  P   +  AP W   +S  P   P    +  VPP
Sbjct: 398 GSFQQPANYFLPT-MPQPSNRAFYSPNPVAPVRPAPQWASHQSRPPQYQPPAPLMRAVPP 456

Query: 480 ARI 488
            R+
Sbjct: 457 RRM 459
tr_hit_id Q2U379
Definition tr|Q2U379|Q2U379_ASPOR Non-ribosomal peptide synthetase modules and related proteins OS=Aspergillus oryzae
Align length 125
Score (bit) 35.4
E-value 1.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920048|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_D11.
         (495 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2U379|Q2U379_ASPOR Non-ribosomal peptide synthetase modules ...    35   1.5  
tr|Q76KA9|Q76KA9_TOBAC Nitrite reductase OS=Nicotiana tabacum GN...    33   5.6  
tr|Q88T89|Q88T89_LACPL Muramidase (Putative) OS=Lactobacillus pl...    33   7.3  
tr|B6QEJ2|B6QEJ2_PENMA Fungal specific transcription factor, put...    33   7.3  
tr|Q9PL58|Q9PL58_CHLMU Putative uncharacterized protein OS=Chlam...    33   9.5  
tr|Q3MJK8|Q3MJK8_9ANNE Cement protein 3B variant 2 OS=Phragmatop...    33   9.5  
tr|A6ZRG2|A6ZRG2_YEAS7 Cell wall integrity and stress response c...    33   9.5  

>tr|Q2U379|Q2U379_ASPOR Non-ribosomal peptide synthetase modules and
           related proteins OS=Aspergillus oryzae GN=AO090038000149
           PE=3 SV=1
          Length = 825

 Score = 35.4 bits (80), Expect = 1.5
 Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 13/125 (10%)
 Frame = -2

Query: 488 NPCRWNCLYCTTERSWDWPKRLHMCPIRCYGDALSWCMTNVLHLLVLW*ARCRSIFY*LR 309
           +PC      C        P R+ +CP RC  DALS    ++ HL   W A     F  L+
Sbjct: 80  SPCNRPIDQCAGPSITTMPFRVKVCPQRCAQDALS----DIQHLSADWVAHGHYGFPNLK 135

Query: 308 ERTLLWRGRKRLHRKYM*LSNGYPSV-------------GKFCSRALCCSVEYQLVR*FP 168
             +  +    +LH     L NGYP V               F S AL C    +++  F 
Sbjct: 136 NLSPEYSAAYQLHNL---LRNGYPPVVECFLDTAAVNFKANFDSGALHCHQVTKILSQFA 192

Query: 167 RMLIC 153
            +L C
Sbjct: 193 HILSC 197


>tr|Q76KA9|Q76KA9_TOBAC Nitrite reductase OS=Nicotiana tabacum
           GN=nii4 PE=2 SV=1
          Length = 584

 Score = 33.5 bits (75), Expect = 5.6
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +3

Query: 330 STTSLPQHKKMQNISHTPAQRIAVAP 407
           S TSLP HK+   +  TP Q +AVAP
Sbjct: 9   SATSLPNHKRFSKLHATPPQTVAVAP 34


>tr|Q88T89|Q88T89_LACPL Muramidase (Putative) OS=Lactobacillus
           plantarum GN=lp_3093 PE=4 SV=1
          Length = 860

 Score = 33.1 bits (74), Expect = 7.3
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
 Frame = +2

Query: 140 TVSFRKSTSSGITLQVG-TQQSSTRLLNKTFLHSGTHWKVTCTSDAASSSPSTKGFFLAV 316
           T S   +T+S +T     T  +ST    K      T  K T    AAS S  T G +   
Sbjct: 440 TTSSNDTTTSEVTTDTSATTNTSTSSTTKKASGWYTFTKNTAIKSAASDSAKTVGTYSKG 499

Query: 317 SRIYFYNEPTTAQED-AEH*SYTSSAH 394
           +R+Y+  E TT  E    + SY+ S H
Sbjct: 500 NRVYYNAEITTNGETWLRYLSYSGSEH 526


>tr|B6QEJ2|B6QEJ2_PENMA Fungal specific transcription factor,
           putative OS=Penicillium marneffei ATCC 18224
           GN=PMAA_089370 PE=4 SV=1
          Length = 665

 Score = 33.1 bits (74), Expect = 7.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 321 EYTSTTSLPQHKKMQNISHTPAQRIAVAPDWTHMESLW 434
           ++ +  SL Q  +  N++HT AQ   V PDW  +  LW
Sbjct: 599 DHQAAMSLQQVSQAGNLNHTSAQASQVMPDWNDLWFLW 636


>tr|Q9PL58|Q9PL58_CHLMU Putative uncharacterized protein
           OS=Chlamydia muridarum GN=TC_0250 PE=4 SV=1
          Length = 497

 Score = 32.7 bits (73), Expect = 9.5
 Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 2/113 (1%)
 Frame = +2

Query: 74  TTNSLSLRTLYQ*HEWCMVCTCTVSFRKSTSSGITLQVGTQQSSTRLLNKTFLHSGTHWK 253
           T  +LS  T Y   +   + T   S +  +SS I +   TQ+SST    +    S +  +
Sbjct: 61  TEKTLSPETKYFSPQKEPLLTQYTSKQSGSSSRIIISTSTQESSTSQSERNHSQSQSMLQ 120

Query: 254 VTCTSDAASSSPSTKGFFLAVSR--IYFYNEPTTAQEDAEH*SYTSSAHRRST 406
            T  S   SS+ S +G     S+  +     P T      H + T+ A  RST
Sbjct: 121 RTIPSPKTSSTSSMQGRLCTTSQQTVPLRGTPLTVSLPCPHLTQTNQATSRST 173


>tr|Q3MJK8|Q3MJK8_9ANNE Cement protein 3B variant 2 OS=Phragmatopoma
           californica PE=2 SV=1
          Length = 306

 Score = 32.7 bits (73), Expect = 9.5
 Identities = 26/107 (24%), Positives = 51/107 (47%)
 Frame = +2

Query: 158 STSSGITLQVGTQQSSTRLLNKTFLHSGTHWKVTCTSDAASSSPSTKGFFLAVSRIYFYN 337
           S+SS  +    +  SS+   + +   S ++   + +S  +SSS S+   + + S  Y  +
Sbjct: 112 SSSSSSSSSYSSSSSSSSYSSSSSSSSSSYSSSSSSSSYSSSSSSSSSSYSSSSSSYSSS 171

Query: 338 EPTTAQEDAEH*SYTSSAHRRST*LDTYGVSLANPSSSLWYSINSST 478
             + +   +   SY+SS+   S+   +   S +  SSS  YS +SS+
Sbjct: 172 SSSYSSSSSSSSSYSSSSSSSSSYSSSSSSSCSYSSSSSSYSSSSSS 218


>tr|A6ZRG2|A6ZRG2_YEAS7 Cell wall integrity and stress response
           component OS=Saccharomyces cerevisiae (strain YJM789)
           GN=WSC2 PE=4 SV=1
          Length = 503

 Score = 32.7 bits (73), Expect = 9.5
 Identities = 33/109 (30%), Positives = 48/109 (44%)
 Frame = +2

Query: 158 STSSGITLQVGTQQSSTRLLNKTFLHSGTHWKVTCTSDAASSSPSTKGFFLAVSRIYFYN 337
           STSS  T    T  SST + +KT     T    + ++  +SSS ST       S     +
Sbjct: 125 STSSTATSTSTTSSSSTSVSSKTSTKLDTKTSTSSSATHSSSSSST------TSTTTSSS 178

Query: 338 EPTTAQEDAEH*SYTSSAHRRST*LDTYGVSLANPSSSLWYSINSSTCT 484
           E TT+   +   S TS+    ST   T   S +  ++S   S +SS+ T
Sbjct: 179 ETTTSSSSSSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSSSET 227