| BP920045 |
| Clone id |
YMU001_000132_D08 |
| Library |
YMU01 |
| Length |
350 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000132_D08. |
| Accession |
BP920045 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL2249Contig1 |
| Sequence |
TCCGGGACATGGCAGAGAATCGTCCTCAAAGAACGGAAGATAGGAATCCGCGAGGGTGGC
ACCTTGACTCAGGAAAGAATCATTCACAAAGAACGGAAGACTGGAATGTGCAACAGTGGC
ACCGTGACTCGGCAGAGAATCGCACACGCACACAAAAAACAGAAGATTGGCATCTGGAAG
GGTGGCCCCTTGATTTGGCAAAGAGAGACAGTGGAGATCTAAGCAAGCCTTACAGAAGCT
CGAAAGCCTATAGCCAGTCGCACAGTGGAGCTCCAAGGTGGCCATCTCAGAAGAGCAATG
GAGCTTCATTAGAGTGGCATCACAGTAATGGTGATGGACAGAGAAAAGAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q80WV7 |
| Definition |
sp|Q80WV7|SRR2L_MOUSE SRRM2-like protein OS=Mus musculus |
| Align length |
111 |
| Score (bit) |
33.9 |
| E-value |
0.26 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920045|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_D08.
(350 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q80WV7|SRR2L_MOUSE SRRM2-like protein OS=Mus musculus GN=MNCb... 34 0.26
sp|P29126|XYNA_RUMFL Bifunctional endo-1,4-beta-xylanase xylA OS... 32 1.3
sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Hom... 30 2.8
sp|P07522|EGF_RAT Pro-epidermal growth factor OS=Rattus norvegic... 30 2.8
sp|Q9BEA0|EGF_CANFA Pro-epidermal growth factor OS=Canis familia... 30 2.8
sp|Q9Y817|RAV1_SCHPO Putative regulator of V-ATPase in vacuolar ... 30 3.7
sp|Q2HXL6|EDEM3_MOUSE ER degradation-enhancing alpha-mannosidase... 30 3.7
sp|Q8SX83|SPEN_DROME Protein split ends OS=Drosophila melanogast... 30 4.8
sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related pr... 30 4.8
sp|Q9RZ02|HUTU_DEIRA Urocanate hydratase OS=Deinococcus radiodur... 30 4.8
sp|P01133|EGF_HUMAN Pro-epidermal growth factor OS=Homo sapiens ... 30 4.8
sp|Q8BWT5|DIP2A_MOUSE Disco-interacting protein 2 homolog A OS=M... 30 4.8
sp|Q9UDW3|ZMAT5_HUMAN Zinc finger matrin-type protein 5 OS=Homo ... 29 6.3
sp|Q75N90|FBN3_HUMAN Fibrillin-3 OS=Homo sapiens GN=FBN3 PE=2 SV=2 29 6.3
sp|Q61555|FBN2_MOUSE Fibrillin-2 OS=Mus musculus GN=Fbn2 PE=2 SV=1 29 6.3
sp|P35556|FBN2_HUMAN Fibrillin-2 OS=Homo sapiens GN=FBN2 PE=1 SV=2 29 6.3
sp|Q08879|FBLN1_MOUSE Fibulin-1 OS=Mus musculus GN=Fbln1 PE=1 SV=2 29 6.3
sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1... 29 6.3
sp|A2ARV4|LRP2_MOUSE Low-density lipoprotein receptor-related pr... 29 8.2
sp|A0QRN3|HUTU_MYCS2 Urocanate hydratase OS=Mycobacterium smegma... 29 8.2
sp|Q92674|CENPI_HUMAN Centromere protein I OS=Homo sapiens GN=CE... 29 8.2
sp|P78712|ARP3_NEUCR Actin-related protein 3 OS=Neurospora crass... 29 8.2
>sp|Q80WV7|SRR2L_MOUSE SRRM2-like protein OS=Mus musculus
GN=MNCb-4760 PE=2 SV=1
Length = 648
Score = 33.9 bits (76), Expect = 0.26
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Frame = +3
Query: 6 DMAENRPQRTEDRNPRGWHLDSGKNHSQRTEDWNVQQWHRDSAENRTRTQKTEDWHLEGW 185
D R +R R+ + + K + + +++H S+ + + + G
Sbjct: 215 DSGSRRKRRYRSRSLKSKRKEKNKERKRPHTESPGRRFHHHSSASSHSPSMSSHYSDSGS 274
Query: 186 PLDLAK--RDSGDLSKPYRSSKAYSQSHSGAPRWPSQKSNGASLEWHHSNG 332
P L+ RD G + RSS + S S SG W S + NG S + ++G
Sbjct: 275 PSRLSPKHRDDGRKTGSQRSSGSRSPSPSGGSGWGSPQQNGGSRQRSGAHG 325
>sp|P29126|XYNA_RUMFL Bifunctional endo-1,4-beta-xylanase xylA
OS=Ruminococcus flavefaciens GN=xynA PE=3 SV=1
Length = 954
Score = 31.6 bits (70), Expect = 1.3
Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +3
Query: 6 DMAENRPQRTEDRNPRGWHLDSG-KNHSQRTEDWNVQQWHRDSAENRTRTQKTE--DWHL 176
D N Q + +N W+ + N+ Q+ DWN QW+ + N + Q + W+
Sbjct: 391 DNNNNWNQNNQQQNNWDWNNQNNWNNNQQQNNDWN--QWNNQNNWNNNQQQNNDWNQWNN 448
Query: 177 EGWPLDLAKRDSGDLSKPYRSSKAYSQSHSGAPRWPSQKSNGASLEWHHSN 329
+G + + D ++ + + ++Q+++ W +N +W +N
Sbjct: 449 QG-------QQNNDWNQ-WNNQNNWNQNNNQQNAWNGWDNNNNWNQWDQNN 491
>sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Homo
sapiens GN=GPATCH8 PE=1 SV=1
Length = 1089
Score = 30.4 bits (67), Expect = 2.8
Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Frame = +3
Query: 6 DMAENRPQRTEDRNPRGW----HLDSGKNHSQRTEDWNV---QQWHRDSAENRTRTQKTE 164
D + +R+ D + + H +S +D+++ Q R + R R++
Sbjct: 486 DRSRRHSKRSHDSDDSDYASSKHRSKRHKYSSSDDDYSLSCSQSRSRSRSHTRERSRSRG 545
Query: 165 DWHLEGWPLDLAKRDS-GDLSKPYRSSKAYSQSHSGAPRWPSQKSNGASLEWHHSN 329
+KR S + ++ S++YS+ S + R PSQ+S W H +
Sbjct: 546 RSRSSSCSRSRSKRRSRSTTAHSWQRSRSYSRDRSRSTRSPSQRSGSRKRSWGHES 601
>sp|P07522|EGF_RAT Pro-epidermal growth factor OS=Rattus norvegicus
GN=Egf PE=1 SV=2
Length = 1133
Score = 30.4 bits (67), Expect = 2.8
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 264 CATGYRLSSFCKACLDLHCLSLPNQGATLPDANLL-FFVCVC 142
CA GY LS K C D++ +L N G TL N+ + C C
Sbjct: 342 CAEGYTLSRDRKYCEDVNECALQNHGCTLGCENIPGSYYCTC 383
>sp|Q9BEA0|EGF_CANFA Pro-epidermal growth factor OS=Canis familiaris
GN=EGF PE=2 SV=1
Length = 1216
Score = 30.4 bits (67), Expect = 2.8
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 297 CSSEMATLELHCATGYRLSSFCKACLDLHCLSLPNQGATLPDANLL-FFVCVC 142
C + + CA GY LS K C D++ + N G TL N+ + C C
Sbjct: 332 CGQDSKSYSCTCAEGYTLSQDGKYCEDVNECAFWNHGCTLGCENIPGSYYCTC 384
>sp|Q9Y817|RAV1_SCHPO Putative regulator of V-ATPase in vacuolar
membrane protein 1 OS=Schizosaccharomyces pombe GN=rav1
PE=2 SV=1
Length = 1297
Score = 30.0 bits (66), Expect = 3.7
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +3
Query: 6 DMAENRPQRTEDRNPRG---WHLDSGKNHSQRTEDWNVQQWHRDSAENRTRTQKTEDWHL 176
+++ N +DRNP +H+ K + R + W + WH++SA RT + D+
Sbjct: 979 ELSRNHYAEIDDRNPENVSLYHIALHKINVFR-DLWRLASWHKESA--RTVKLLSNDFSK 1035
Query: 177 EGWPLDLAKRDSGDLSK 227
+ W + +K LSK
Sbjct: 1036 KKWKVVASKNAFALLSK 1052
>sp|Q2HXL6|EDEM3_MOUSE ER degradation-enhancing alpha-mannosidase-like
3 OS=Mus musculus GN=Edem3 PE=1 SV=2
Length = 931
Score = 30.0 bits (66), Expect = 3.7
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Frame = +3
Query: 63 LDSGKNHSQ---------RTEDWNVQQWHRDSAENRTRTQKTEDWHLEGWPLDLAKRDSG 215
LD+ + H Q R D ++ + S+EN ++ Q E +DLA ++S
Sbjct: 777 LDAIREHEQVEVLLSDKARDRDPEMENEDQPSSENDSQNQSAEQMLSLSQTVDLADKESP 836
Query: 216 DLSKPYRSSKAYSQSHSGAPRWPSQKSNGASLEWHHSNGDGQ 341
+ S + S S A PS++ +G++ ++ DG+
Sbjct: 837 EHPADSHSEASPSDSEEAAGFAPSEQISGSTENHETTSLDGE 878
>sp|Q8SX83|SPEN_DROME Protein split ends OS=Drosophila melanogaster
GN=spen PE=1 SV=2
Length = 5560
Score = 29.6 bits (65), Expect = 4.8
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +3
Query: 6 DMAENRPQRTEDRNPRGWHLDSGKN-HSQRTEDWNVQQWHRDSAENRTRTQK--TEDWHL 176
++ ++P+R ++R H +S + H + + + ++ R S T T + T H
Sbjct: 2280 ELQSHQPKREKEREHFSSHANSSSSRHKSKRDHHHHREKKRHSVAESTNTDEEHTPQQHN 2339
Query: 177 EGWPLDLAKRDS-GDLSKPYRSSKAYSQSHSGAPRWPSQKSNGASLEWHHSNGDGQR 344
+ A S G+LS ++ + H R +KS+ S E HHS+ R
Sbjct: 2340 PHRRISAAGSGSAGELSSAATNTSSGKLHHQHHRRSVERKSSRGSDEGHHSSSKSLR 2396
>sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein
2 OS=Homo sapiens GN=LRP2 PE=1 SV=3
Length = 4655
Score = 29.6 bits (65), Expect = 4.8
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -3
Query: 330 HYCDATLMKLHCSSEMATLELHCATGYRLSSFCKACLDL-HCLSLPNQGATLPDANLLFF 154
H C TL +CS C GY+L S + C+D+ C +P + + + +
Sbjct: 3124 HNCTDTLTSFYCS---------CRPGYKLMSDKRTCVDIDECTEMPFVCSQKCENVIGSY 3174
Query: 153 VCVC 142
+C C
Sbjct: 3175 ICKC 3178
>sp|Q9RZ02|HUTU_DEIRA Urocanate hydratase OS=Deinococcus radiodurans
GN=hutU PE=3 SV=1
Length = 558
Score = 29.6 bits (65), Expect = 4.8
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +3
Query: 207 DSGDLSKPYRSSKAYSQSHSGAPRWPSQK-----SNGAS-LEWHHSNGDG 338
D+G ++ PYR ++A WP ++GAS + +HH G G
Sbjct: 443 DAGSVASPYRETEAMKDGSDAVSDWPLLNFGVGIASGASWMSFHHGGGVG 492
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B6NT37 |
| Definition |
tr|B6NT37|B6NT37_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae |
| Align length |
56 |
| Score (bit) |
40.8 |
| E-value |
0.034 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920045|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_D08.
(350 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B6NT37|B6NT37_BRAFL Putative uncharacterized protein (Fragmen... 41 0.034
tr|Q6BTC7|Q6BTC7_DEBHA DEHA2D01716p OS=Debaryomyces hansenii GN=... 39 0.13
tr|Q29RT3|Q29RT3_BOVIN MS4A13 protein OS=Bos taurus GN=NYD-SP21 ... 38 0.29
tr|B6NYN3|B6NYN3_BRAFL Putative uncharacterized protein (Fragmen... 37 0.37
tr|B6LHB2|B6LHB2_BRAFL Putative uncharacterized protein (Fragmen... 37 0.49
tr|B6PYC1|B6PYC1_BRAFL Putative uncharacterized protein OS=Branc... 37 0.64
tr|B6KZ70|B6KZ70_BRAFL Putative uncharacterized protein (Fragmen... 37 0.64
tr|Q0RPH6|Q0RPH6_FRAAA Putative peptidyl prolyl cis-trans isomer... 36 0.83
tr|A8XIG6|A8XIG6_CAEBR Putative uncharacterized protein OS=Caeno... 36 0.83
tr|B6PS02|B6PS02_BRAFL Putative uncharacterized protein OS=Branc... 36 1.1
tr|B6NT33|B6NT33_BRAFL Putative uncharacterized protein (Fragmen... 36 1.1
tr|Q6DFA5|Q6DFA5_XENLA Gas6-prov protein OS=Xenopus laevis GN=ga... 35 1.4
tr|B6NYN1|B6NYN1_BRAFL Putative uncharacterized protein (Fragmen... 35 1.4
tr|B5I1P6|B5I1P6_9ACTO Amidase OS=Streptomyces sviceus ATCC 2908... 35 2.4
tr|Q235Y4|Q235Y4_TETTH Putative uncharacterized protein OS=Tetra... 34 3.2
tr|B6NNV9|B6NNV9_BRAFL Putative uncharacterized protein OS=Branc... 34 3.2
tr|B3S7B2|B3S7B2_TRIAD Putative uncharacterized protein OS=Trich... 34 3.2
tr|B3MYH5|B3MYH5_DROAN GF22142 OS=Drosophila ananassae GN=GF2214... 34 3.2
tr|B3LD41|B3LD41_PLAKH Putative uncharacterized protein OS=Plasm... 34 3.2
tr|A8WLW3|A8WLW3_CAEBR Putative uncharacterized protein (Fragmen... 34 3.2
tr|Q6EIY8|Q6EIY8_NEOFR CelA OS=Neocallimastix frontalis GN=celA ... 34 3.2
tr|Q2GN52|Q2GN52_CHAGB Putative uncharacterized protein OS=Chaet... 34 3.2
tr|Q6PAE0|Q6PAE0_XENLA MGC68463 protein OS=Xenopus laevis GN=gas... 34 4.1
tr|Q28WN7|Q28WN7_DROPS GA18652 OS=Drosophila pseudoobscura pseud... 34 4.1
tr|B4H765|B4H765_DROPE GL11788 OS=Drosophila persimilis GN=GL117... 34 4.1
tr|A5D6T9|A5D6T9_DANRE Putative uncharacterized protein OS=Danio... 33 5.4
tr|A1L1N4|A1L1N4_DANRE Zgc:158165 OS=Danio rerio GN=zgc:158165 P... 33 5.4
tr|Q9STJ8|Q9STJ8_ARATH Receptor kinase-like protein OS=Arabidops... 33 5.4
tr|A8KBG4|A8KBG4_XENTR LOC100127663 protein OS=Xenopus tropicali... 33 7.0
tr|B3TPQ8|B3TPQ8_FELCA Nanog homeobox (Fragment) OS=Felis silves... 33 7.0
>tr|B6NT37|B6NT37_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_235815 PE=4 SV=1
Length = 288
Score = 40.8 bits (94), Expect = 0.034
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -3
Query: 300 HCSSEMATLELHCATGYRLSSFCKACLDLHCLSLPNQGATLPDANLL-FFVCVCDS 136
HC++ + + + C+TGYRL+S AC D+ N G +N + F CVCD+
Sbjct: 219 HCTNNLGSFDCSCSTGYRLNSDGMACDDVDECHTANGGCEQTCSNTIGSFQCVCDN 274
Score = 33.5 bits (75), Expect = 5.4
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 300 HCSSEMATLELHCATGYRLSSFCKACLDLHCLSLPNQGATLPDANLL-FFVCVC 142
+C++ + + C TGYRL+S + C D+ S N G T N + F C C
Sbjct: 55 NCNNIIGSYWCSCGTGYRLNSDSRTCADVDECSGANGGCTQTCTNTISSFYCSC 108
>tr|Q6BTC7|Q6BTC7_DEBHA DEHA2D01716p OS=Debaryomyces hansenii
GN=DEHA2D01716g PE=4 SV=2
Length = 900
Score = 38.9 bits (89), Expect = 0.13
Identities = 29/106 (27%), Positives = 42/106 (39%)
Frame = +3
Query: 30 RTEDRNPRGWHLDSGKNHSQRTEDWNVQQWHRDSAENRTRTQKTEDWHLEGWPLDLAKRD 209
RT + N GW G N+ T D+N D + + T+ T D + RD
Sbjct: 3 RTPNINSSGWLQLWGPNNQSNTADYNTNNEREDVPSSNSATKLTNDDLKKRDSESKKDRD 62
Query: 210 SGDLSKPYRSSKAYSQSHSGAPRWPSQKSNGASLEWHHSNGDGQRK 347
S KP SS + + + W S KS ++E H N D +
Sbjct: 63 SAKAIKPKASSSSLVNNANNWLNW-SSKSKVDNVEHHLDNDDNNEQ 107
>tr|Q29RT3|Q29RT3_BOVIN MS4A13 protein OS=Bos taurus GN=NYD-SP21
PE=2 SV=1
Length = 861
Score = 37.7 bits (86), Expect = 0.29
Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = +3
Query: 30 RTEDRNPRGWHLDSGKNHSQRTEDWNVQQWHRDSAENRTRTQKTEDWHLEGWPL-DLAKR 206
++ DR + W ++ RT+DW ++W + E + Q +++W + W DL +
Sbjct: 598 QSPDRRVQTWQSLGQQSQEWRTQDWKSKEW--EKRERQLEMQHSQNWDFQAWQTQDLQVK 655
Query: 207 DSGDLSKPYRSSKAYSQSHSGAPRWPSQKSNGASLEWHHSNGDGQ 341
+S ++ ++ H+ P ++S + H N D Q
Sbjct: 656 ESRKQRSLFQETQTL---HATIPADLDEQSQDVLQDSQHQNKDQQ 697
>tr|B6NYN3|B6NYN3_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_239184 PE=4 SV=1
Length = 331
Score = 37.4 bits (85), Expect = 0.37
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -3
Query: 300 HCSSEMATLELHCATGYRLSSFCKACLDLHCLSLPNQGATLPDANLL-FFVCVCD---SL 133
+C++ + + C TGYRL+S + C D++ S+ N G NL+ F C C SL
Sbjct: 52 NCNNIIGSYWCSCGTGYRLNSDSRTCADINECSIANGGCGQTCTNLIGSFQCSCQNGYSL 111
Query: 132 PSHGAT 115
S G T
Sbjct: 112 NSDGFT 117
Score = 33.9 bits (76), Expect = 4.1
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -3
Query: 300 HCSSEMATLELHCATGYRLSSFCKACLDLHCLSLPNQGATLPDANLL-FFVCVCDS 136
HC++ + + + C+ GYRL+S C D+ N G +N + F CVC++
Sbjct: 175 HCTNNIGSFDCSCSIGYRLNSDGLTCDDVDECHTANGGCEQMCSNTIGSFQCVCNN 230
>tr|B6LHB2|B6LHB2_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_206286 PE=4 SV=1
Length = 346
Score = 37.0 bits (84), Expect = 0.49
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -3
Query: 300 HCSSEMATLELHCATGYRLSSFCKACLDLHCLSLPNQGATLPDANLL-FFVCVCD---SL 133
+C++ + + C TGYRL+S + C D+ S+ N G NL+ F C C SL
Sbjct: 72 NCNNIIGSYWCSCGTGYRLNSDSRTCADIDECSIGNGGCGQTCTNLIGSFQCSCQNGYSL 131
Query: 132 PSHGAT 115
S+G T
Sbjct: 132 NSNGFT 137
>tr|B6PYC1|B6PYC1_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_112416 PE=4 SV=1
Length = 2697
Score = 36.6 bits (83), Expect = 0.64
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 300 HCSSEMATLELHCATGYRLSSFCKACLDLHCLSLPNQGATLPDANLL-FFVCVC 142
HC++ + + + C+TGYRL+S AC D++ N G N + F C C
Sbjct: 951 HCTNNIGSFDCSCSTGYRLNSDALACDDVNECDTANGGCDQTCTNSIGSFQCSC 1004
Score = 33.1 bits (74), Expect = 7.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 300 HCSSEMATLELHCATGYRLSSFCKACLDLHCLSLPNQGATLPDANLL-FFVCVC 142
+C++ + + C TGYRL+S + C D+ S N G AN + F C C
Sbjct: 869 NCNNIIGSYWCSCGTGYRLNSDSRTCADVDECSGANGGCAQACANTISSFYCSC 922
>tr|B6KZ70|B6KZ70_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_199364 PE=4 SV=1
Length = 256
Score = 36.6 bits (83), Expect = 0.64
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -3
Query: 300 HCSSEMATLELHCATGYRLSSFCKACLDLHCLSLPNQGATLPDANLL-FFVCVCD---SL 133
+C++ + + C TGYRL+S + C D+ S+ N G NL+ F C C SL
Sbjct: 57 NCNNIVGSYWCSCGTGYRLNSDSRTCADVDECSIGNGGCEQTCTNLIGSFQCSCRNGYSL 116
Query: 132 PSHGAT 115
S G+T
Sbjct: 117 NSDGST 122
>tr|Q0RPH6|Q0RPH6_FRAAA Putative peptidyl prolyl cis-trans isomerase
with RNA binding region OS=Frankia alni (strain ACN14a)
GN=FRAAL1907 PE=4 SV=1
Length = 157
Score = 36.2 bits (82), Expect = 0.83
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 36 EDRNPRGWHLDSGKNHSQRTEDWNVQQWHRDSAENRTRTQKTEDWHLEGWPLDLAKRDS 212
+D+ W D + +R +DW W +D + R + +DW + W D ++D+
Sbjct: 73 DDKRKDDWRHDDWRKDDKRKDDWRHDDWRKD--DKRHDDWRKDDWRKDDWFKDDKRKDN 129
Score = 35.8 bits (81), Expect = 1.1
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = +3
Query: 30 RTEDRNPRGWHLDSGKNHSQRTEDWNVQQWHRD---SAENRTRTQKTEDWHLEGWPLDLA 200
R +D+ W D + +R +DW W +D + R + +DW + W D
Sbjct: 86 RKDDKRKDDWRHDDWRKDDKRHDDWRKDDWRKDDWFKDDKRKDNWRHDDWRKDDWFKDDK 145
Query: 201 KRD 209
+ D
Sbjct: 146 RND 148
Score = 33.5 bits (75), Expect = 5.4
Identities = 14/60 (23%), Positives = 24/60 (40%)
Frame = +3
Query: 30 RTEDRNPRGWHLDSGKNHSQRTEDWNVQQWHRDSAENRTRTQKTEDWHLEGWPLDLAKRD 209
R +D+ W D +R +DW W +D ++ +DW + W D + D
Sbjct: 56 RKDDKRKDDWFKDDWFKDDKRKDDWRHDDWRKDD-------KRKDDWRHDDWRKDDKRHD 108
>tr|A8XIG6|A8XIG6_CAEBR Putative uncharacterized protein
OS=Caenorhabditis briggsae GN=CBG13676 PE=4 SV=1
Length = 411
Score = 36.2 bits (82), Expect = 0.83
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = +3
Query: 96 EDWNVQQWHRDSAENRTRTQKTEDWHLEGWPLDLAKRDSGDLSKPYRSSKAYSQSHSGAP 275
E W + ++ E R E E W L + D G + +K +Q H A
Sbjct: 184 ETWRAAEKAEETIEELERALLKERKTSEKWRNQL-EHDEGKKRETLSGNKEKTQVH--AR 240
Query: 276 RWPSQKSNGASLEWHHSNGDGQRKE 350
R PS+ SNG+S++WH+ + + E
Sbjct: 241 RSPSRSSNGSSVDWHNEKKERKTGE 265
>tr|B6PS02|B6PS02_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_110261 PE=4 SV=1
Length = 778
Score = 35.8 bits (81), Expect = 1.1
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 3/114 (2%)
Frame = +3
Query: 3 RDMAENRPQRTEDRNPRGWHLDSGKNHSQRTEDWNVQQWHRDSAENRTRTQKTEDWHLEG 182
R + NR ED +P+G DS + HSQ +ED + R+ ++R R K H G
Sbjct: 589 RGYSPNRKHSVEDNSPKGAR-DSKRRHSQSSED---RFMDRNDNDDRDRIDKDHKTHRHG 644
Query: 183 WPLDLAKRDSGDLSKPYRSSKAYSQSHSGAPRWPSQ---KSNGASLEWHHSNGD 335
LD A+ + + + H A W K++ + HH GD
Sbjct: 645 RRLDSAEERAKAAALRKAENLNEVAKHCSAV-WNGALVLKNSAFGTKMHHLGGD 697
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