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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919950
Clone id YMU001_000131_B03
Library
Length 423
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000131_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTGATTTTTAACCACAGAAAAACCAGTGACCTTGACTTTACACCTCCAAAGAAATCGTTT
CCAAAACATAAATTTGAATTTGATTATACGTGGCCAGATGAATTGGACTGTGAACAAAAG
GACCAGCCTTAGTAGGATGGAGCAGAGCCTCCTCCATTGAGCCTCCTAAACTAAAGAATG
AAAGGCCTCCAAAAGCTCGCAAAAACAATGAACTAAAAGAACTACAGTAATGACACCTAT
TGTTAACAGTCTCATCACGGCCACAGATACAAAATTGCCAGTAAAGTACAAGAGATCCAA
TTCGTGGCCCGGGTCATATGGGTTTTCAACCACTCATAAACCTTTATGCACGTATCTCCA
TCTAAAATCCCCAGAGGTGATCTGCATCGGACGCAAGAGTAAGGACTCCAACAATACACC
TTA
■■Homology search results ■■ -
sp_hit_id P30855
Definition sp|P30855|EVGS_ECOLI Sensor protein evgS OS=Escherichia coli (strain K12)
Align length 36
Score (bit) 31.6
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919950|Adiantum capillus-veneris mRNA, clone:
YMU001_000131_B03.
         (423 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30855|EVGS_ECOLI Sensor protein evgS OS=Escherichia coli (st...    32   1.4  
sp|P58402|EVGS_ECO57 Sensor protein evgS OS=Escherichia coli O15...    31   1.8  
sp|P13497|BMP1_HUMAN Bone morphogenetic protein 1 OS=Homo sapien...    30   3.0  
sp|Q62381|TLL1_MOUSE Tolloid-like protein 1 OS=Mus musculus GN=T...    30   3.9  
sp|Q55CX9|IPO7_DICDI Probable importin-7 homolog OS=Dictyosteliu...    30   4.0  
sp|Q8CDR2|RSHL1_MOUSE Radial spokehead-like protein 1 OS=Mus mus...    30   5.0  
sp|Q02VS5|MUTL_LACLS DNA mismatch repair protein mutL OS=Lactoco...    30   5.0  
sp|A2RP08|MUTL_LACLM DNA mismatch repair protein mutL OS=Lactoco...    30   5.0  
sp|Q9CDL1|MUTL_LACLA DNA mismatch repair protein mutL OS=Lactoco...    30   5.0  
sp|Q8JI28|TLL1_XENLA Tolloid-like protein 1 OS=Xenopus laevis GN...    29   6.6  
sp|O43897|TLL1_HUMAN Tolloid-like protein 1 OS=Homo sapiens GN=T...    29   6.6  
sp|Q8BWJ3|KPB2_MOUSE Phosphorylase b kinase regulatory subunit a...    29   8.8  

>sp|P30855|EVGS_ECOLI Sensor protein evgS OS=Escherichia coli
           (strain K12) GN=evgS PE=1 SV=2
          Length = 1197

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 405 SLLLRPMQITSGDFRWRYVHKGL*VVENPYDPGHEL 298
           + L +P+++T  + +W   H  L V+ENPY P + +
Sbjct: 282 AFLNKPLELTEHEKQWIKQHPNLKVLENPYSPPYSM 317


>sp|P58402|EVGS_ECO57 Sensor protein evgS OS=Escherichia coli
           O157:H7 GN=evgS PE=3 SV=1
          Length = 1197

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 405 SLLLRPMQITSGDFRWRYVHKGL*VVENPYDPGHEL 298
           + L +P+++T  + +W   H  L V+ENPY P + +
Sbjct: 282 AFLNKPLELTEHEKQWIKQHPDLKVLENPYSPPYSM 317


>sp|P13497|BMP1_HUMAN Bone morphogenetic protein 1 OS=Homo sapiens
           GN=BMP1 PE=1 SV=2
          Length = 986

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
 Frame = +2

Query: 254 ITATDTKLPVKYKRSNSWPGSYGFSTTHKPLC------TYLHLKSP 373
           I +TD++L V+++ S++W G  GF   ++ +C       Y H++SP
Sbjct: 405 IVSTDSRLWVEFRSSSNWVGK-GFFAVYEAICGGDVKKDYGHIQSP 449


>sp|Q62381|TLL1_MOUSE Tolloid-like protein 1 OS=Mus musculus GN=Tll1
           PE=1 SV=1
          Length = 1013

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 10/36 (27%), Positives = 26/36 (72%)
 Frame = +2

Query: 242 VNSLITATDTKLPVKYKRSNSWPGSYGFSTTHKPLC 349
           V  ++T+TD+++ ++++ S++W G  GF+  ++ +C
Sbjct: 428 VAGVLTSTDSRMWIEFRSSSNWVGK-GFAAVYEAIC 462


>sp|Q55CX9|IPO7_DICDI Probable importin-7 homolog OS=Dictyostelium
            discoideum GN=DDB_G0269860 PE=3 SV=1
          Length = 1065

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 31   LDFTPPKKSFPKHKFEFDYT-WPDELDCEQKDQ 126
            +D    +  F  HKFEF++T  PD  DC+  D+
Sbjct: 910  IDENDEEDYFDNHKFEFEFTEIPDNQDCQHDDE 942


>sp|Q8CDR2|RSHL1_MOUSE Radial spokehead-like protein 1 OS=Mus
           musculus GN=Rshl1 PE=2 SV=1
          Length = 708

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +2

Query: 230 MTPIVNSLITATDTKLPVKYKRSNSWPGSYGFSTTHKPLCTYL---HLKSPE 376
           ++P    L  +   +  V   RSN WPG+Y ++T  K    Y+   H  SPE
Sbjct: 595 LSPWTTRLSCSLSPQYSVAIVRSNLWPGAYAYATGKKFENIYIGWGHKYSPE 646


>sp|Q02VS5|MUTL_LACLS DNA mismatch repair protein mutL
           OS=Lactococcus lactis subsp. cremoris (strain SK11)
           GN=mutL PE=3 SV=1
          Length = 656

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 413 CWSPYSCVRCRSPLGILDGDTCIKVYEWL-KTHMTRATNW 297
           C +PYSC   R  +    GD   K++  + +TH ++A +W
Sbjct: 613 CKNPYSCAHGRPTIVHFSGDDIQKMFRRIQETHRSKAASW 652


>sp|A2RP08|MUTL_LACLM DNA mismatch repair protein mutL
           OS=Lactococcus lactis subsp. cremoris (strain MG1363)
           GN=mutL PE=3 SV=1
          Length = 656

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 413 CWSPYSCVRCRSPLGILDGDTCIKVYEWL-KTHMTRATNW 297
           C +PYSC   R  +    GD   K++  + +TH ++A +W
Sbjct: 613 CKNPYSCAHGRPTIVHFSGDDIQKMFRRIQETHRSKAASW 652


>sp|Q9CDL1|MUTL_LACLA DNA mismatch repair protein mutL
           OS=Lactococcus lactis subsp. lactis GN=mutL PE=3 SV=2
          Length = 656

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 413 CWSPYSCVRCRSPLGILDGDTCIKVYEWL-KTHMTRATNW 297
           C +PYSC   R  +    GD   K++  + +TH ++A +W
Sbjct: 613 CKNPYSCAHGRPTIVHFSGDDIQKMFRRIQETHRSKAASW 652


>sp|Q8JI28|TLL1_XENLA Tolloid-like protein 1 OS=Xenopus laevis
           GN=tll1 PE=1 SV=1
          Length = 1007

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 9/33 (27%), Positives = 25/33 (75%)
 Frame = +2

Query: 251 LITATDTKLPVKYKRSNSWPGSYGFSTTHKPLC 349
           ++T+TD+++ ++++ S++W G  GF+  ++ +C
Sbjct: 426 VLTSTDSRMWIEFRSSSNWVGK-GFAAVYEAIC 457
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919950|Adiantum capillus-veneris mRNA, clone:
YMU001_000131_B03.
         (423 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******