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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919943
Clone id YMU001_000130_H11
Library
Length 517
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000130_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTTTTTTTTTTTTTTAGCATAAAGCATATCTTTAAATTACATTGTAAGTCA
AAGTCTGTACAAACCCATAAGGGGGGGATAGATATTTCATTATTTTGTACTTCTTGCCAA
CAAAATTGCAGGCCCCACCGATAGAAGCCACTGAGCTCAAATAGAGCGAAAGAACTCATA
CCTTTCTCACCAACCAGGAAAAAACCACTAATATCAAGACCACGACAGGCTTCTGCGCCA
AAAACCTAAGGTTCACCCTCCAGCCATGTTGGCGAAGCTGGTCACAAAGGGCACCCCAGC
AGCTTAGCAGGAATGCCCTGATTTCCTTAGCAAGATCAAGGAGGGACAAATTTACAGCAA
AATCTTTTGATGACCTCAAAAGCTCTGCCACATTTAATTCCTCAAATTTTGAAGAGCCTC
CTGTATCATCAGAAAGTTTATGACAAGATGTCCTCACCTGTTCAGCTAAGTTGAGCCTAT
CATTGATAATGTCAGACAACTTTACAAGCAATCTAAC
■■Homology search results ■■ -
sp_hit_id A1TVU4
Definition sp|A1TVU4|PROA_ACIAC Gamma-glutamyl phosphate reductase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1)
Align length 71
Score (bit) 33.1
E-value 0.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919943|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_H11.
         (493 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A1TVU4|PROA_ACIAC Gamma-glutamyl phosphate reductase OS=Acido...    33   0.70 
sp|Q32KZ9|TEKT1_BOVIN Tektin-1 OS=Bos taurus GN=TEKT1 PE=2 SV=1        32   1.6  
sp|Q9DAJ2|TEKT1_MOUSE Tektin-1 OS=Mus musculus GN=Tekt1 PE=2 SV=1      32   2.0  
sp|Q6Q783|SUV42_MOUSE Histone-lysine N-methyltransferase SUV420H...    30   4.6  
sp|Q5F3P8|SET1B_CHICK Histone-lysine N-methyltransferase SETD1B ...    30   7.9  

>sp|A1TVU4|PROA_ACIAC Gamma-glutamyl phosphate reductase
           OS=Acidovorax avenae subsp. citrulli (strain AAC00-1)
           GN=proA PE=3 SV=1
          Length = 426

 Score = 33.1 bits (74), Expect = 0.70
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +3

Query: 264 RAPQQLSRNALISLARSRRDKFTAKSFDDLKSSATFNSSNFEEPPVSSESL*QDVL-TCS 440
           RAP  +   AL++LAR  RD  TA   D+ +      ++   EP V    L   VL TC+
Sbjct: 26  RAPSAVKNRALLALARRLRDNTTALQADNARDLERARAAGLAEPMVDRLKLTPKVLETCA 85

Query: 441 AKLSLSLIMSD 473
                   M D
Sbjct: 86  LGCEQLATMGD 96


>sp|Q32KZ9|TEKT1_BOVIN Tektin-1 OS=Bos taurus GN=TEKT1 PE=2 SV=1
          Length = 418

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +3

Query: 276 QLSRNALISLARSRRDKFTAKSFDDLKSSATFNSSNFE 389
           +L+R+A  +L +  RDKFTA + DD+  S   NS N +
Sbjct: 162 RLNRSAKYNLEKDLRDKFTAITIDDICFSLNNNSPNIK 199


>sp|Q9DAJ2|TEKT1_MOUSE Tektin-1 OS=Mus musculus GN=Tekt1 PE=2 SV=1
          Length = 418

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +3

Query: 276 QLSRNALISLARSRRDKFTAKSFDDLKSSATFNSS--NFEEPPVSSE 410
           +L+R+A  +L +  RDKFTA + DD+  S   NS   NF E  V  E
Sbjct: 162 RLNRSAKYNLEKDLRDKFTAITIDDVCFSLNNNSPNINFSEKVVRIE 208


>sp|Q6Q783|SUV42_MOUSE Histone-lysine N-methyltransferase SUV420H2
           OS=Mus musculus GN=Suv420h2 PE=1 SV=1
          Length = 468

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
 Frame = +1

Query: 79  FCTSCQQNC----RPHR*K-PLSSNRAKELIPFSPTRKKPLISRP--RQASAP 216
           FC +CQ +C     PH    PL   RA +  P  P RK+    RP  RQAS P
Sbjct: 296 FCAACQPSCLLPASPHMDYLPLWLQRAPQPQPIVPPRKRHRRRRPRIRQASLP 348


>sp|Q5F3P8|SET1B_CHICK Histone-lysine N-methyltransferase SETD1B
            OS=Gallus gallus GN=SETD1B PE=2 SV=1
          Length = 2008

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +1

Query: 124  PLSSNRAKELIPFSPTRKKPLISRPRQASAPKT*GSPSSHVGEAGHKGHPSSLAGMP*FP 303
            PL  +++ + +P +P    PL       S+P+  GSP S+  ++     P   +G+P  P
Sbjct: 1398 PLGKSQSTDTVPATPGSDAPLTGSSLTLSSPQVPGSPFSYPSQS-----PGINSGIPRTP 1452

Query: 304  *QD 312
             +D
Sbjct: 1453 GRD 1455
tr_hit_id Q16LV5
Definition tr|Q16LV5|Q16LV5_AEDAE Putative uncharacterized protein OS=Aedes aegypti
Align length 77
Score (bit) 40.4
E-value 0.045
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919943|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_H11.
         (493 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q16LV5|Q16LV5_AEDAE Putative uncharacterized protein OS=Aedes...    40   0.045
tr|Q4ABH1|Q4ABH1_DROME Muscle-specific protein 300, isoform D OS...    35   2.4  
tr|Q4ABH0|Q4ABH0_DROME Muscle-specific protein 300, isoform B OS...    35   2.4  
tr|B4P3S7|B4P3S7_DROYA GE11346 OS=Drosophila yakuba GN=GE11346 P...    35   2.4  
tr|B3N4T2|B3N4T2_DROER GG25055 OS=Drosophila erecta GN=GG25055 P...    35   2.4  
tr|Q6C2H8|Q6C2H8_YARLI YALI0F07777p OS=Yarrowia lipolytica GN=YA...    35   2.5  
tr|A8KC00|A8KC00_DANRE Aga protein OS=Danio rerio GN=aga PE=2 SV=1     34   4.3  
tr|Q6C8G8|Q6C8G8_YARLI YALI0D19778p OS=Yarrowia lipolytica GN=YA...    33   5.5  
tr|Q8QN81|Q8QN81_9PHYC EsV-1-209 OS=Ectocarpus siliculosus virus...    33   5.6  
tr|A7NTC2|A7NTC2_VITVI Chromosome chr18 scaffold_1, whole genome...    33   7.1  
tr|A5AY74|A5AY74_VITVI Putative uncharacterized protein OS=Vitis...    33   7.1  
tr|B4I1D6|B4I1D6_DROSE GM18531 OS=Drosophila sechellia GN=GM1853...    33   7.1  
tr|B3NTG0|B3NTG0_DROER GG18108 OS=Drosophila erecta GN=GG18108 P...    33   7.3  
tr|A8XVA0|A8XVA0_CAEBR CBR-GNA-2 protein OS=Caenorhabditis brigg...    33   7.3  
tr|B4KDH9|B4KDH9_DROMO GI22470 OS=Drosophila mojavensis GN=GI224...    33   9.3  
tr|Q4RNJ7|Q4RNJ7_TETNG Chromosome 21 SCAF15012, whole genome sho...    33   9.5  
tr|A5E2G1|A5E2G1_LODEL Putative uncharacterized protein OS=Lodde...    33   9.5  

>tr|Q16LV5|Q16LV5_AEDAE Putative uncharacterized protein OS=Aedes
           aegypti GN=AAEL012505 PE=4 SV=1
          Length = 1729

 Score = 40.4 bits (93), Expect = 0.045
 Identities = 25/77 (32%), Positives = 39/77 (50%)
 Frame = +3

Query: 255 WSQRAPQQLSRNALISLARSRRDKFTAKSFDDLKSSATFNSSNFEEPPVSSESL*QDVLT 434
           WS+++ ++    AL SL  ++R K T K  DDL+S AT   +N  E P   +   Q+V  
Sbjct: 669 WSEKSHEEFVTAALKSLTETQRSKLTQKDMDDLRSDATLKVTN--ELPGFKKRYIQNVWN 726

Query: 435 CSAKLSLSLIMSDNFTS 485
                  SL+  D+ T+
Sbjct: 727 QYCSNQSSLVKPDDLTT 743


>tr|Q4ABH1|Q4ABH1_DROME Muscle-specific protein 300, isoform D
            OS=Drosophila melanogaster GN=Msp-300 PE=1 SV=2
          Length = 12345

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
 Frame = +3

Query: 210  CAKNLRFTLQPCWRSWSQRAPQ-----QLSRNALISLARSRRDKFT-----AKSFDDLKS 359
            C +N    +  CWRSW+Q AP      QL+   +      R D F         FD L S
Sbjct: 1183 CCQNSLEEVVNCWRSWNQLAPTCEEWLQLAEQKVNQSEDERLDFFQDIPVWKDKFDALAS 1242

Query: 360  SATFNSSNFEEP 395
            SA +  ++ EEP
Sbjct: 1243 SANYLIASCEEP 1254


>tr|Q4ABH0|Q4ABH0_DROME Muscle-specific protein 300, isoform B
            OS=Drosophila melanogaster GN=Msp-300 PE=1 SV=2
          Length = 8382

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
 Frame = +3

Query: 210  CAKNLRFTLQPCWRSWSQRAPQ-----QLSRNALISLARSRRDKFT-----AKSFDDLKS 359
            C +N    +  CWRSW+Q AP      QL+   +      R D F         FD L S
Sbjct: 1183 CCQNSLEEVVNCWRSWNQLAPTCEEWLQLAEQKVNQSEDERLDFFQDIPVWKDKFDALAS 1242

Query: 360  SATFNSSNFEEP 395
            SA +  ++ EEP
Sbjct: 1243 SANYLIASCEEP 1254


>tr|B4P3S7|B4P3S7_DROYA GE11346 OS=Drosophila yakuba GN=GE11346 PE=4
            SV=1
          Length = 8015

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
 Frame = +3

Query: 210  CAKNLRFTLQPCWRSWSQRAPQ-----QLSRNALISLARSRRDKFT-----AKSFDDLKS 359
            C +N    +  CWRSW+Q AP      QL+   +      R D F         FD L S
Sbjct: 816  CCQNSLEEVVNCWRSWNQLAPTCEEWLQLAEQKVNQSEDERLDFFQDIPVWKDKFDALAS 875

Query: 360  SATFNSSNFEEP 395
            SA +  ++ EEP
Sbjct: 876  SANYLIASCEEP 887


>tr|B3N4T2|B3N4T2_DROER GG25055 OS=Drosophila erecta GN=GG25055 PE=4
            SV=1
          Length = 8391

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
 Frame = +3

Query: 210  CAKNLRFTLQPCWRSWSQRAPQ-----QLSRNALISLARSRRDKFT-----AKSFDDLKS 359
            C +N    +  CWRSW+Q AP      QL+   +      R D F         FD L S
Sbjct: 1192 CCQNSLEEVVNCWRSWNQLAPTCEEWLQLAEQKVNQSEDERLDFFQDIPVWKDKFDALAS 1251

Query: 360  SATFNSSNFEEP 395
            SA +  ++ EEP
Sbjct: 1252 SANYLIASCEEP 1263


>tr|Q6C2H8|Q6C2H8_YARLI YALI0F07777p OS=Yarrowia lipolytica
           GN=YALI0F07777g PE=4 SV=1
          Length = 595

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = +1

Query: 160 FSPTRKKPLISRPRQASA--PKT*GSPSSHVGEAGHKGHPSSLAGMP*FP 303
           F P   KP++  P Q     P   G P  H+G+  H GHP    G P  P
Sbjct: 449 FYPQYDKPMLPHPGQPQQQQPPQQGPPPPHMGQQQHPGHPQHHPGHPQHP 498


>tr|A8KC00|A8KC00_DANRE Aga protein OS=Danio rerio GN=aga PE=2 SV=1
          Length = 337

 Score = 33.9 bits (76), Expect = 4.3
 Identities = 19/63 (30%), Positives = 34/63 (53%)
 Frame = +1

Query: 34  SKSVQTHKGGIDISLFCTSCQQNCRPHR*KPLSSNRAKELIPFSPTRKKPLISRPRQASA 213
           S+ + T+K    I++F    QQNC+P+  K +S + +K   P+ P  K+ +   PR    
Sbjct: 135 SEDLSTNKS---IAIFSQWLQQNCQPNYRKNVSPDPSKSCGPYKPKAKQWMSKHPRGNFD 191

Query: 214 PKT 222
           P++
Sbjct: 192 PRS 194


>tr|Q6C8G8|Q6C8G8_YARLI YALI0D19778p OS=Yarrowia lipolytica
           GN=YALI0D19778g PE=4 SV=1
          Length = 1313

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = +3

Query: 270 PQQLSRNALISLARSRRDKFTAKSFDDLKSSATFNSSNFEEPP 398
           P+Q S  +L S+ R R+D  TA++ D + SS +  +S+ E PP
Sbjct: 571 PRQGSSASLASMERPRQDSATAENSDGMYSSKSVLNSHLEPPP 613


>tr|Q8QN81|Q8QN81_9PHYC EsV-1-209 OS=Ectocarpus siliculosus virus 1
           GN=ORF 209 PE=4 SV=1
          Length = 399

 Score = 33.5 bits (75), Expect = 5.6
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +1

Query: 61  GIDISLFCTSCQQNCRPHR*KPL-SSNRAKELIP-FSPTRKKPLISRPRQ 204
           GI ++L CTSC    R     P+   ++A++L P   P R K L+S PR+
Sbjct: 16  GIRLTLVCTSCASTARSDEGDPIVCFSKARDLFPTIPPKRVKQLMSTPRR 65


>tr|A7NTC2|A7NTC2_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00014610001
           PE=4 SV=1
          Length = 734

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
 Frame = +3

Query: 165 TNQEKTTNIKTTTGFCAKNLRFTLQPCWRSWSQRAPQQLSRNALISLARSRRD------- 323
           T +    +++++ G  AK+     +PCW +W+  A Q   R   IS++  +R        
Sbjct: 36  TERSALFDLRSSLGLRAKDWPRRSEPCW-NWTGVACQN-GRVVGISVSGLQRTHAGRVNP 93

Query: 324 KFTAKSFDDLKSSATFNSSNFEEP 395
           +F   S  +L   ATFNSS FE P
Sbjct: 94  QFAVDSLANLSLLATFNSSGFELP 117