BP919937
Clone id YMU001_000130_H05
Library
Length 362
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000130_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTCACTGAGACAGGAGCAGCTTGGGACATTTTAGCATTCACAATTTTCTCCGTAGCTTTG
ACAAATCTGACTGGGTTACCTGTTGTAGGTAACCCATTTTATCTCTTCAACTCTCACTAG
AGAAACAATTAAATACCACTTGCTCATACACGACGTTTGATGAAGCTTGCAAATGAAAGT
TGAGCACAACGTAGGCCCCAAAAATCTACACAATCAATCATCATCGTCGGTATCCTCATA
GTCTTCCTCTACCCTTTGTGCAGCCAGAATTCTAGCAGCCTCCATAGCCTCCCTTTGCAA
TTTCTGCTTTCGTAAACCTTCCTTCAAGTGGAAGGCTTCTCGCTCCTGAATGCGCCTGAT
CA
■■Homology search results ■■ -
sp_hit_id P30817
Definition sp|P30817|US10_CHV1 Virion protein US10 homolog (Fragment) OS=Cercopithecine herpesvirus 1
Align length 24
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919937|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_H05.
(362 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P30817|US10_CHV1 Virion protein US10 homolog (Fragment) OS=Ce... 30 2.9
sp|Q9VLT5|POE_DROME Protein purity of essence OS=Drosophila mela... 29 6.4
sp|Q043I1|LSPA_LACGA Lipoprotein signal peptidase OS=Lactobacill... 29 6.4
sp|A6UZY0|SOTB_PSEA7 Probable sugar efflux transporter OS=Pseudo... 29 8.4
sp|Q74JC2|LSPA_LACJO Lipoprotein signal peptidase OS=Lactobacill... 29 8.4

>sp|P30817|US10_CHV1 Virion protein US10 homolog (Fragment)
OS=Cercopithecine herpesvirus 1 PE=3 SV=1
Length = 208

Score = 30.4 bits (67), Expect = 2.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1

Query: 229 GILIVFLYPLCSQNSSSLHSLPLQ 300
G + LYPLC Q S+ L +LPL+
Sbjct: 62 GATVALLYPLCDQPSAHLQTLPLE 85


>sp|Q9VLT5|POE_DROME Protein purity of essence OS=Drosophila
melanogaster GN=poe PE=1 SV=1
Length = 5322

Score = 29.3 bits (64), Expect = 6.4
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3

Query: 192 TLCSTFICKLHQTSCMSKWYLIVSLVRVE--EIKWV 91
T+C T IC+LH + + ++I L RV E KW+
Sbjct: 71 TICQTQICQLHDATAVLIRFIIYRLPRVSVYETKWL 106


>sp|Q043I1|LSPA_LACGA Lipoprotein signal peptidase OS=Lactobacillus
gasseri (strain ATCC 33323 / DSM 20243) GN=lspA PE=3
SV=1
Length = 154

Score = 29.3 bits (64), Expect = 6.4
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 16/96 (16%)
Frame = +1

Query: 13 GAAWDILAFTIFSVALTNLTGLPVVGNPFYLFNSH*RN----------------N*IPLA 144
GAAW+I + + L ++ + VV +YLFN +N N I
Sbjct: 53 GAAWNIFSGQMILFYLISIAAIAVV--VYYLFNPKYKNWLFDTGLALVLGGIIGNFIDRL 110

Query: 145 HTRRLMKLANES*AQRRPQKSTQSIIIVGILIVFLY 252
H + ++ + Q S I VGI++VF+Y
Sbjct: 111 HLKYVIDMLQLDFVQFNIFNIADSAITVGIVLVFIY 146


>sp|A6UZY0|SOTB_PSEA7 Probable sugar efflux transporter
OS=Pseudomonas aeruginosa (strain PA7) GN=sotB PE=3 SV=1
Length = 396

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1

Query: 214 SIIIVGILIVFLYPLCSQNSSSLHSLPLQF 303
S++ + L+ L PL SQNS SL SLP+ F
Sbjct: 177 SVLTLLYLVRSLPPLPSQNSGSLRSLPMLF 206


>sp|Q74JC2|LSPA_LACJO Lipoprotein signal peptidase OS=Lactobacillus
johnsonii GN=lspA PE=3 SV=1
Length = 154

Score = 28.9 bits (63), Expect = 8.4
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 16/96 (16%)
Frame = +1

Query: 13 GAAWDILAFTIFSVALTNLTGLPVVGNPFYLFNSH*RN----------------N*IPLA 144
GAAW+I + + L ++ + VV +YLFN +N N I
Sbjct: 53 GAAWNIFSGQMILFYLISIAAIAVV--IYYLFNPKYKNGLFDTGLALVLGGIIGNFIDRL 110

Query: 145 HTRRLMKLANES*AQRRPQKSTQSIIIVGILIVFLY 252
H + ++ + Q S I VGI++VF+Y
Sbjct: 111 HLKYVIDMLQLDFIQFNIFNIADSAITVGIILVFIY 146


tr_hit_id A6NPT8
Definition tr|A6NPT8|A6NPT8_9BACE Putative uncharacterized protein OS=Bacteroides capillosus ATCC 29799
Align length 46
Score (bit) 33.1
E-value 7.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919937|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_H05.
(362 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6NPT8|A6NPT8_9BACE Putative uncharacterized protein OS=Bacte... 33 7.2

>tr|A6NPT8|A6NPT8_9BACE Putative uncharacterized protein
OS=Bacteroides capillosus ATCC 29799 GN=BACCAP_00204
PE=4 SV=1
Length = 605

Score = 33.1 bits (74), Expect = 7.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2

Query: 202 FGAYVVLNFHLQASSNVVYEQVVFNCFSSES*RDKMGYLQQVTQSD 65
FG Y++ FHL A + Y F+ F DK YL+ V ++D
Sbjct: 292 FGDYIITRFHLNAVKDPTYSGTYFDTFP-----DKADYLRSVAEAD 332