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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919886
Clone id YMU001_000130_C09
Library
Length 570
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000130_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ACCGGCTGCTGGCGGTATCCGGGAGGATTCAGATGGTGTTGGGGGACATGGCGACGCAGG
GGGAAAGGCTGCAGGCGCTGCTGTCGTGGAGGGACCCAAGGGCGACATGCATGTTCACTT
TGTTTTGCTTACTGGAAGCTGTCATTCTGTATGTAACGCCATTCAATGTGGTGGCGGTGC
TGTATGGGTTTTATGTGCTGCGCCATCCACGCTTCCGCGACAAGGTGCAGGCGGCCCTCT
GAGACCACATGCTCTGAGTCACAGTCAGTCAGTCATACACTCTATTTACTGCAGTGTGAA
CATTGAGTCCTGAGTCCTTGCCACGCCTGGACTTGGTTGTGATCAGTGTTAGAAAAAAAT
TGGGTCTAGTGTATTTCAACCAGCTGAAATTATAAAATCCCGGTTAGATTTTGAGCTTGC
CTTTAAGAAAACCGGCAAATTTACACAAGTTTTAGTGTAATTGCCAGAAAAAGCTTCAAA
TTTTGACCTAAAAACCGGGAGAATTCATGTTTTCCCTTATTTCGATCGGTTAGGAAAAGT
GTACTTTTCTAGCCCTGGTTGTGATGCGAC
■■Homology search results ■■ -
sp_hit_id Q5RJH2
Definition sp|Q5RJH2|MCTP2_MOUSE Multiple C2 and transmembrane domain-containing protein 2 OS=Mus musculus
Align length 54
Score (bit) 37.4
E-value 0.053
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919886|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_C09.
         (570 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5RJH2|MCTP2_MOUSE Multiple C2 and transmembrane domain-conta...    37   0.053
sp|Q6DN12|MCTP2_HUMAN Multiple C2 and transmembrane domain-conta...    35   0.34 
sp|Q6DN14|MCTP1_HUMAN Multiple C2 and transmembrane domain-conta...    31   3.8  
sp|P0C7X3|CCYL3_HUMAN Putative cyclin-Y-like protein 3 OS=Homo s...    31   3.8  
sp|Q8VHN7|GPR98_MOUSE G-protein coupled receptor 98 OS=Mus muscu...    30   8.5  

>sp|Q5RJH2|MCTP2_MOUSE Multiple C2 and transmembrane
           domain-containing protein 2 OS=Mus musculus GN=Mctp2
           PE=2 SV=1
          Length = 878

 Score = 37.4 bits (85), Expect = 0.053
 Identities = 16/54 (29%), Positives = 31/54 (57%)
 Frame = +3

Query: 27  IQMVLGDMATQGERLQALLSWRDPRATCMFTLFCLLEAVILYVTPFNVVAVLYG 188
           +Q +L ++A+ GER++ + +W  P  + +  L   +  VILY  P   + +L+G
Sbjct: 771 VQNILEEVASFGERIKNVFNWTVPFLSLLACLILAITTVILYFIPLRYIILLWG 824


>sp|Q6DN12|MCTP2_HUMAN Multiple C2 and transmembrane
           domain-containing protein 2 OS=Homo sapiens GN=MCTP2
           PE=1 SV=2
          Length = 878

 Score = 34.7 bits (78), Expect = 0.34
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +3

Query: 27  IQMVLGDMATQGERLQALLSWRDPRATCMFTLFCLLEAVILYVTPFNVVAVLYG 188
           +Q VL ++A+ GER++   +W  P  + +  L      +ILY  P   + +++G
Sbjct: 771 VQNVLEEIASFGERIKNTFNWTVPFLSSLACLILAAATIILYFIPLRYIILIWG 824


>sp|Q6DN14|MCTP1_HUMAN Multiple C2 and transmembrane domain-containing
            protein 1 OS=Homo sapiens GN=MCTP1 PE=2 SV=1
          Length = 999

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 13/54 (24%), Positives = 29/54 (53%)
 Frame = +3

Query: 27   IQMVLGDMATQGERLQALLSWRDPRATCMFTLFCLLEAVILYVTPFNVVAVLYG 188
            +Q +L ++A+ GER++   +W  P  + +  +   +   ILY  P   + +++G
Sbjct: 891  VQNILDEVASFGERIKNTFNWTVPFLSWLAIVALCVFTAILYCIPLRYIVLVWG 944


>sp|P0C7X3|CCYL3_HUMAN Putative cyclin-Y-like protein 3 OS=Homo
           sapiens GN=CCNYL3 PE=3 SV=1
          Length = 344

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 63  ERLQALLSWRDPRATCMFTLFCLLEAVILYVTPFNVVAVLY 185
           E+L       DP+  C+F  FC L  VI    P  +VA++Y
Sbjct: 60  EKLPGKSFKHDPKRNCIFRHFCTLFQVIKLTAPCAIVALVY 100


>sp|Q8VHN7|GPR98_MOUSE G-protein coupled receptor 98 OS=Mus musculus
            GN=Gpr98 PE=2 SV=1
          Length = 6298

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
 Frame = +1

Query: 118  LCFAYWKLSFCM*RHSMWWRCCMGFMCCA-------IHASATRCRRPSETTCSESQSVSH 276
            LC A     FC  RHSM+    +  M  A         ASA      SE +CS   +V+H
Sbjct: 5913 LCLAVVSHMFCA-RHSMFAAKLLTHMMVASLGTQILFLASAYASPHLSEESCSAVAAVAH 5971

Query: 277  TLYLLQCEH*VLSPCHAW 330
             LYL Q    ++   + W
Sbjct: 5972 YLYLCQFSWMLIQSVNFW 5989
tr_hit_id Q8LSY7
Definition tr|Q8LSY7|Q8LSY7_SEQSE Phosphoribosyltransferase (Fragment) OS=Sequoia sempervirens
Align length 75
Score (bit) 121.0
E-value 2.0e-26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919886|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_C09.
         (570 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8LSY7|Q8LSY7_SEQSE Phosphoribosyltransferase (Fragment) OS=S...   121   2e-26
tr|A7PVT7|A7PVT7_VITVI Chromosome chr8 scaffold_34, whole genome...   120   4e-26
tr|A5BAG8|A5BAG8_VITVI Putative uncharacterized protein OS=Vitis...   120   4e-26
tr|Q69T22|Q69T22_ORYSJ Os06g0614000 protein OS=Oryza sativa subs...   119   1e-25
tr|A3BDJ6|A3BDJ6_ORYSJ Putative uncharacterized protein OS=Oryza...   119   1e-25
tr|A2YF05|A2YF05_ORYSI Putative uncharacterized protein OS=Oryza...   119   1e-25
tr|A2Q4U9|A2Q4U9_MEDTR C2 OS=Medicago truncatula GN=MtrDRAFT_AC1...   119   2e-25
tr|Q8LSY4|Q8LSY4_9CONI Phosphoribosyltransferase (Fragment) OS=T...   118   2e-25
tr|Q8LSY5|Q8LSY5_THUDO Phosphoribosyltransferase (Fragment) OS=T...   118   3e-25
tr|Q8LSY2|Q8LSY2_CRYJA Phosphoribosyltransferase (Putative phosp...   118   3e-25
tr|Q76IU3|Q76IU3_CRYJA Putative phosphoribosylanthranilate trans...   118   3e-25
tr|Q403P3|Q403P3_CRYJA Putative phosphoribosylanthranilate trans...   118   3e-25
tr|Q8H2Q5|Q8H2Q5_ORYSJ Os07g0483500 protein OS=Oryza sativa subs...   117   3e-25
tr|A2YLB1|A2YLB1_ORYSI Putative uncharacterized protein OS=Oryza...   117   3e-25
tr|Q8LSY8|Q8LSY8_TAXDI Phosphoribosyltransferase (Fragment) OS=T...   117   6e-25
tr|Q403L3|Q403L3_TAXDI Putative phosphoribosylanthranilate trans...   117   6e-25
tr|Q403L2|Q403L2_TAXDI Putative phosphoribosylanthranilate trans...   117   6e-25
tr|Q403K9|Q403K9_TAXDI Putative phosphoribosylanthranilate trans...   117   6e-25
tr|Q403K8|Q403K8_TAXDI Putative phosphoribosylanthranilate trans...   117   6e-25
tr|Q403K5|Q403K5_TAXDI Putative phosphoribosylanthranilate trans...   117   6e-25
tr|Q403K4|Q403K4_TAXDI Putative phosphoribosylanthranilate trans...   116   8e-25
tr|Q9M2R0|Q9M2R0_ARATH Anthranilate phosphoribosyltransferase-li...   115   1e-24
tr|Q94JQ8|Q94JQ8_ARATH AT3g57880/T10K17_90 OS=Arabidopsis thalia...   115   1e-24
tr|Q8LSY6|Q8LSY6_9CONI Phosphoribosyltransferase (Fragment) OS=C...   115   1e-24
tr|Q8LSY3|Q8LSY3_CHAOB Phosphoribosyltransferase (Fragment) OS=C...   115   1e-24
tr|Q56YY7|Q56YY7_ARATH Anthranilate phosphoribosyltransferase-li...   115   1e-24
tr|Q0TV71|Q0TV71_ARATH Anthranilate phosphoribosyltransferase-li...   115   1e-24
tr|Q9FL59|Q9FL59_ARATH Anthranilate phosphoribosyltransferase-li...   115   2e-24
tr|Q93ZA2|Q93ZA2_ARATH AT5g06850/MOJ9_2 OS=Arabidopsis thaliana ...   115   2e-24
tr|Q76IT1|Q76IT1_CRYJA Putative phosphoribosylanthranilate trans...   115   2e-24

>tr|Q8LSY7|Q8LSY7_SEQSE Phosphoribosyltransferase (Fragment)
           OS=Sequoia sempervirens GN=pat PE=4 SV=1
          Length = 191

 Score =  121 bits (304), Expect = 2e-26
 Identities = 55/75 (73%), Positives = 66/75 (88%)
 Frame = +3

Query: 3   RLLAVSGRIQMVLGDMATQGERLQALLSWRDPRATCMFTLFCLLEAVILYVTPFNVVAVL 182
           RL +V+GR+Q V+GDMATQGER QALLSWRDPRAT +F LFCL+ A++LYVTPF V+AVL
Sbjct: 98  RLRSVAGRLQTVVGDMATQGERFQALLSWRDPRATAIFVLFCLIAAIVLYVTPFQVIAVL 157

Query: 183 YGFYVLRHPRFRDKV 227
           +G YVLRHPRFR K+
Sbjct: 158 FGIYVLRHPRFRHKL 172


>tr|A7PVT7|A7PVT7_VITVI Chromosome chr8 scaffold_34, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00025351001
           PE=4 SV=1
          Length = 777

 Score =  120 bits (302), Expect = 4e-26
 Identities = 55/75 (73%), Positives = 67/75 (89%)
 Frame = +3

Query: 3   RLLAVSGRIQMVLGDMATQGERLQALLSWRDPRATCMFTLFCLLEAVILYVTPFNVVAVL 182
           RL +++GRIQ V+GD+ATQGERLQ+LLSWRDPRAT +F LFCL+ A++LYVTPF VVA+L
Sbjct: 684 RLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRATALFVLFCLVAAIVLYVTPFQVVALL 743

Query: 183 YGFYVLRHPRFRDKV 227
            GFYVLRHPRFR K+
Sbjct: 744 TGFYVLRHPRFRHKL 758


>tr|A5BAG8|A5BAG8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_013781 PE=4 SV=1
          Length = 752

 Score =  120 bits (302), Expect = 4e-26
 Identities = 55/75 (73%), Positives = 67/75 (89%)
 Frame = +3

Query: 3   RLLAVSGRIQMVLGDMATQGERLQALLSWRDPRATCMFTLFCLLEAVILYVTPFNVVAVL 182
           RL +++GRIQ V+GD+ATQGERLQ+LLSWRDPRAT +F LFCL+ A++LYVTPF VVA+L
Sbjct: 659 RLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRATALFVLFCLVAAIVLYVTPFQVVALL 718

Query: 183 YGFYVLRHPRFRDKV 227
            GFYVLRHPRFR K+
Sbjct: 719 TGFYVLRHPRFRHKL 733


>tr|Q69T22|Q69T22_ORYSJ Os06g0614000 protein OS=Oryza sativa subsp.
           japonica GN=P0691E09.4 PE=4 SV=1
          Length = 632

 Score =  119 bits (298), Expect = 1e-25
 Identities = 54/77 (70%), Positives = 67/77 (87%)
 Frame = +3

Query: 3   RLLAVSGRIQMVLGDMATQGERLQALLSWRDPRATCMFTLFCLLEAVILYVTPFNVVAVL 182
           RL +V+GRIQ V+GDMATQGERLQ+LL WRDPRATC+F +FCL+ AV+LYVTPF VVA++
Sbjct: 539 RLRSVAGRIQTVVGDMATQGERLQSLLGWRDPRATCLFVVFCLVAAVVLYVTPFRVVALV 598

Query: 183 YGFYVLRHPRFRDKVQA 233
            G Y+LRHPRFR ++ A
Sbjct: 599 AGLYLLRHPRFRSRLPA 615


>tr|A3BDJ6|A3BDJ6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_021118 PE=4 SV=1
          Length = 824

 Score =  119 bits (298), Expect = 1e-25
 Identities = 54/77 (70%), Positives = 67/77 (87%)
 Frame = +3

Query: 3   RLLAVSGRIQMVLGDMATQGERLQALLSWRDPRATCMFTLFCLLEAVILYVTPFNVVAVL 182
           RL +V+GRIQ V+GDMATQGERLQ+LL WRDPRATC+F +FCL+ AV+LYVTPF VVA++
Sbjct: 731 RLRSVAGRIQTVVGDMATQGERLQSLLGWRDPRATCLFVVFCLVAAVVLYVTPFRVVALV 790

Query: 183 YGFYVLRHPRFRDKVQA 233
            G Y+LRHPRFR ++ A
Sbjct: 791 AGLYLLRHPRFRSRLPA 807


>tr|A2YF05|A2YF05_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_23701 PE=4 SV=1
          Length = 824

 Score =  119 bits (298), Expect = 1e-25
 Identities = 54/77 (70%), Positives = 67/77 (87%)
 Frame = +3

Query: 3   RLLAVSGRIQMVLGDMATQGERLQALLSWRDPRATCMFTLFCLLEAVILYVTPFNVVAVL 182
           RL +V+GRIQ V+GDMATQGERLQ+LL WRDPRATC+F +FCL+ AV+LYVTPF VVA++
Sbjct: 731 RLRSVAGRIQTVVGDMATQGERLQSLLGWRDPRATCLFVVFCLVAAVVLYVTPFRVVALV 790

Query: 183 YGFYVLRHPRFRDKVQA 233
            G Y+LRHPRFR ++ A
Sbjct: 791 AGLYLLRHPRFRSRLPA 807


>tr|A2Q4U9|A2Q4U9_MEDTR C2 OS=Medicago truncatula
           GN=MtrDRAFT_AC157891g22v2 PE=4 SV=1
          Length = 775

 Score =  119 bits (297), Expect = 2e-25
 Identities = 54/75 (72%), Positives = 66/75 (88%)
 Frame = +3

Query: 3   RLLAVSGRIQMVLGDMATQGERLQALLSWRDPRATCMFTLFCLLEAVILYVTPFNVVAVL 182
           RL +++GRIQ V+GD+ATQGERLQ+LLSWRDPRAT +F LFCL+ A++LYVTPF VVA+L
Sbjct: 682 RLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRATALFVLFCLIAAIVLYVTPFQVVALL 741

Query: 183 YGFYVLRHPRFRDKV 227
            G YVLRHPRFR K+
Sbjct: 742 SGIYVLRHPRFRHKL 756


>tr|Q8LSY4|Q8LSY4_9CONI Phosphoribosyltransferase (Fragment)
           OS=Thuja standishii GN=pat PE=4 SV=1
          Length = 191

 Score =  118 bits (296), Expect = 2e-25
 Identities = 53/75 (70%), Positives = 66/75 (88%)
 Frame = +3

Query: 3   RLLAVSGRIQMVLGDMATQGERLQALLSWRDPRATCMFTLFCLLEAVILYVTPFNVVAVL 182
           RL +V+G++Q V+GDMATQGER QALLSWRDPRA+ +F LFCLL A++LYVTPF V+AVL
Sbjct: 98  RLRSVAGKLQTVVGDMATQGERFQALLSWRDPRASAIFVLFCLLAAIVLYVTPFQVIAVL 157

Query: 183 YGFYVLRHPRFRDKV 227
           +G YVLRHPRFR ++
Sbjct: 158 FGIYVLRHPRFRHRL 172


>tr|Q8LSY5|Q8LSY5_THUDO Phosphoribosyltransferase (Fragment)
           OS=Thujopsis dolabrata GN=pat PE=4 SV=1
          Length = 191

 Score =  118 bits (295), Expect = 3e-25
 Identities = 54/75 (72%), Positives = 65/75 (86%)
 Frame = +3

Query: 3   RLLAVSGRIQMVLGDMATQGERLQALLSWRDPRATCMFTLFCLLEAVILYVTPFNVVAVL 182
           RL +V+ R+Q V+GDMATQGER QALLSWRDPRAT +F LFCLL A++LYVTPF V+AVL
Sbjct: 98  RLRSVAERLQTVVGDMATQGERFQALLSWRDPRATAIFVLFCLLAAIVLYVTPFQVIAVL 157

Query: 183 YGFYVLRHPRFRDKV 227
           +G YVLRHPRFR ++
Sbjct: 158 FGIYVLRHPRFRHRL 172


>tr|Q8LSY2|Q8LSY2_CRYJA Phosphoribosyltransferase (Putative
           phosphoribosylanthranilate transferase) (Fragment)
           OS=Cryptomeria japonica GN=pat PE=4 SV=1
          Length = 191

 Score =  118 bits (295), Expect = 3e-25
 Identities = 53/75 (70%), Positives = 65/75 (86%)
 Frame = +3

Query: 3   RLLAVSGRIQMVLGDMATQGERLQALLSWRDPRATCMFTLFCLLEAVILYVTPFNVVAVL 182
           RL +V+GR+Q V+GD+ATQGER QALLSWRDPRAT +F LFCL  A++LYVTPF V+AVL
Sbjct: 98  RLRSVAGRLQTVVGDIATQGERFQALLSWRDPRATAIFVLFCLFAAIVLYVTPFQVIAVL 157

Query: 183 YGFYVLRHPRFRDKV 227
           +G YVLRHPRFR ++
Sbjct: 158 FGIYVLRHPRFRHRL 172