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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919879
Clone id YMU001_000130_C02
Library
Length 534
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000130_C02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AACTGGAAGAATTCGCGGCCGCGAATTACCTTCCATAGTTCCAACAAGCATGACCAAAAA
GTCTTGAGCTACAACCCCGTTGTCATAACTGATAGAAGTGTGCCAGATTCCAAAAATCGT
AGTTTTTTTCTTGTTGACACCCTTGACTTGGATAGTACTCTCAGATTCCCAACTGACACC
ACACTCCATATGACAAAAGCTTATATTTAGCACCCATGTCTAACATGGCGTTATGTAGCA
CTTTCCCATAGGTGCTATTTAGTTCAATAGGGTATCATAGAAGTGTGTCAGAGTCCAACC
AACCATCCTCTGTTTCAATGTGGAATGCATGTGTAACTCAAAGGTTGGCCTCTCGTTGGC
GTCTTATGCGTTGTTGTCGCTCCTTAGCCTCAGCTTGAGCTTGTATCTTCTTCAATTATG
TTTGTGCCTTGGTTGCCTTTTTTTGATGGATGGCACGTAGCTCCTCTTGGCTTAAAGGAT
CATAGTATCTTTTAAATTTGCTCCCATTGAGAAATCCAACGGTTTCAACTCCAT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919879|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_C02.
         (507 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id A5C706
Definition tr|A5C706|A5C706_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 34
Score (bit) 38.5
E-value 0.19
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919879|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_C02.
         (507 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5C706|A5C706_VITVI Putative uncharacterized protein OS=Vitis...    39   0.19 
tr|A5B436|A5B436_VITVI Putative uncharacterized protein OS=Vitis...    39   0.19 
tr|A5BVC3|A5BVC3_VITVI Putative uncharacterized protein OS=Vitis...    38   0.24 
tr|A5AQU2|A5AQU2_VITVI Putative uncharacterized protein OS=Vitis...    38   0.24 
tr|A5BS82|A5BS82_VITVI Putative uncharacterized protein OS=Vitis...    38   0.32 
tr|A5AVS7|A5AVS7_VITVI Putative uncharacterized protein OS=Vitis...    38   0.32 
tr|A5B4G8|A5B4G8_VITVI Putative uncharacterized protein OS=Vitis...    37   0.41 
tr|A5ADB8|A5ADB8_VITVI Putative uncharacterized protein OS=Vitis...    37   0.41 
tr|A7QXC0|A7QXC0_VITVI Chromosome undetermined scaffold_219, who...    37   0.54 
tr|A5C6P4|A5C6P4_VITVI Putative uncharacterized protein OS=Vitis...    37   0.54 
tr|A5ACK9|A5ACK9_VITVI Putative uncharacterized protein OS=Vitis...    37   0.54 
tr|A7R8W6|A7R8W6_VITVI Chromosome undetermined scaffold_3038, wh...    37   0.71 
tr|A7R746|A7R746_VITVI Chromosome undetermined scaffold_1554, wh...    37   0.71 
tr|A7R594|A7R594_VITVI Chromosome undetermined scaffold_918, who...    37   0.71 
tr|A7R543|A7R543_VITVI Chromosome undetermined scaffold_864, who...    37   0.71 
tr|A7R234|A7R234_VITVI Chromosome undetermined scaffold_396, who...    37   0.71 
tr|A7QXC8|A7QXC8_VITVI Chromosome undetermined scaffold_220, who...    37   0.71 
tr|A7QUP4|A7QUP4_VITVI Chromosome chr10 scaffold_179, whole geno...    37   0.71 
tr|A7QUH2|A7QUH2_VITVI Chromosome undetermined scaffold_178, who...    37   0.71 
tr|A7QUG8|A7QUG8_VITVI Chromosome undetermined scaffold_178, who...    37   0.71 
tr|A7QTJ2|A7QTJ2_VITVI Chromosome undetermined scaffold_169, who...    37   0.71 
tr|A7QRX1|A7QRX1_VITVI Chromosome undetermined scaffold_153, who...    37   0.71 
tr|A7QRS4|A7QRS4_VITVI Chromosome chr13 scaffold_152, whole geno...    37   0.71 
tr|A7QD98|A7QD98_VITVI Chromosome undetermined scaffold_80, whol...    37   0.71 
tr|A7PZY9|A7PZY9_VITVI Chromosome chr8 scaffold_41, whole genome...    37   0.71 
tr|A7PZ36|A7PZ36_VITVI Chromosome chr4 scaffold_39, whole genome...    37   0.71 
tr|A7PSN4|A7PSN4_VITVI Chromosome chr6 scaffold_28, whole genome...    37   0.71 
tr|A7PGE7|A7PGE7_VITVI Chromosome chr6 scaffold_15, whole genome...    37   0.71 
tr|A7PFE2|A7PFE2_VITVI Chromosome chr11 scaffold_14, whole genom...    37   0.71 
tr|A5CBB5|A5CBB5_VITVI Putative uncharacterized protein OS=Vitis...    37   0.71 

>tr|A5C706|A5C706_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_006788 PE=4 SV=1
          Length = 1726

 Score = 38.5 bits (88), Expect = 0.19
 Identities = 18/34 (52%), Positives = 24/34 (70%)
 Frame = -3

Query: 220 GKVLHNAMLDMGAKYKLLSYGVWCQLGI*EYYPS 119
           GKV+  A+LD+GA   LLSY V+ QLG+ E  P+
Sbjct: 557 GKVVEKALLDLGASVNLLSYSVYKQLGLGELKPT 590


>tr|A5B436|A5B436_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_016516 PE=4 SV=1
          Length = 1656

 Score = 38.5 bits (88), Expect = 0.19
 Identities = 18/34 (52%), Positives = 24/34 (70%)
 Frame = -3

Query: 220 GKVLHNAMLDMGAKYKLLSYGVWCQLGI*EYYPS 119
           GKV+  A+LD+GA   LLSY V+ QLG+ E  P+
Sbjct: 659 GKVVEKALLDLGASVNLLSYSVYKQLGLSELKPT 692


>tr|A5BVC3|A5BVC3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_010935 PE=4 SV=1
          Length = 1831

 Score = 38.1 bits (87), Expect = 0.24
 Identities = 18/33 (54%), Positives = 23/33 (69%)
 Frame = -3

Query: 220 GKVLHNAMLDMGAKYKLLSYGVWCQLGI*EYYP 122
           GKV+  A+LD+GA   LLSY V+ QLG+ E  P
Sbjct: 612 GKVVEKALLDLGASVNLLSYSVYKQLGLGELKP 644


>tr|A5AQU2|A5AQU2_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_018387 PE=4 SV=1
          Length = 1554

 Score = 38.1 bits (87), Expect = 0.24
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = -3

Query: 220 GKVLHNAMLDMGAKYKLLSYGVWCQLGI*EYYPS 119
           GKV+  A+LD+GA   LLSY ++ QLG+ E  P+
Sbjct: 471 GKVVEKALLDLGASVNLLSYSIYKQLGLGELKPT 504


>tr|A5BS82|A5BS82_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_031312 PE=4 SV=1
          Length = 1444

 Score = 37.7 bits (86), Expect = 0.32
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = -3

Query: 220 GKVLHNAMLDMGAKYKLLSYGVWCQLGI*EYYPS 119
           GKVL  A+LD+GA   LL Y V+ QLG+ E  P+
Sbjct: 526 GKVLEKALLDLGASVNLLPYSVYKQLGLGELKPT 559


>tr|A5AVS7|A5AVS7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_021516 PE=4 SV=1
          Length = 1765

 Score = 37.7 bits (86), Expect = 0.32
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = -3

Query: 220 GKVLHNAMLDMGAKYKLLSYGVWCQLGI*EYYPS 119
           GKV+  A+LDMGA   LL Y V+ QLG+ E  P+
Sbjct: 687 GKVVEKALLDMGASVNLLPYSVYKQLGLGELKPT 720


>tr|A5B4G8|A5B4G8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_013281 PE=4 SV=1
          Length = 766

 Score = 37.4 bits (85), Expect = 0.41
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = -3

Query: 226 TYGKVLHNAMLDMGAKYKLLSYGVWCQLGI*EYYPS 119
           T GKV+  A+LD+GA   LL Y V+ QLG+ E  P+
Sbjct: 624 TGGKVVEKALLDLGASVNLLPYSVYKQLGLGELKPT 659


>tr|A5ADB8|A5ADB8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_033099 PE=4 SV=1
          Length = 682

 Score = 37.4 bits (85), Expect = 0.41
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = -3

Query: 220 GKVLHNAMLDMGAKYKLLSYGVWCQLGI*EYYPS 119
           GKV+  A+LD+GA   LL Y ++ QLG+ E  PS
Sbjct: 519 GKVVEKALLDLGASVNLLPYSIYKQLGLGELKPS 552


>tr|A7QXC0|A7QXC0_VITVI Chromosome undetermined scaffold_219, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00009088001 PE=4 SV=1
          Length = 683

 Score = 37.0 bits (84), Expect = 0.54
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = -3

Query: 220 GKVLHNAMLDMGAKYKLLSYGVWCQLGI*EYYPS 119
           GKV+  A+LD+GA   LL+Y V+ QLG+ E  P+
Sbjct: 504 GKVVEKALLDLGAIVNLLTYSVYMQLGLGELKPT 537


>tr|A5C6P4|A5C6P4_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_018455 PE=4 SV=1
          Length = 1866

 Score = 37.0 bits (84), Expect = 0.54
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -3

Query: 247  YPIELNSTYGKVLHNAMLDMGAKYKLLSYGVWCQLGI*EYYPS 119
            YP  L    GK++  A+LD+GA   LL Y ++ QLG+ E  P+
Sbjct: 1020 YPTILVMIEGKLMEKALLDLGASVNLLPYFIYKQLGLGELKPT 1062