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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919858
Clone id YMU001_000130_A04
Library
Length 328
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000130_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCTACCTTTGGAACATCATCTTCTATCTCATTACTTTCTGACAAGCTGACCTTCGTCAGC
TTTTCTGACCCTGACTTCATTGACTTTTCTGACCCTAAAGATGAAAGAGATCCCCGCACA
AATATCGTTGATCTCTCCATATAATTCTTGCCAGATCCCTTCTCAAGGTTCCCATCCTCA
TTGCACCGGGCGTTCCCACGTGGGCTCTCAGAATGGATACCAATAGAACTCCGTCTCCCA
AGTTTTGGAGACTTGGCCCGAGTTGTAGGAATCTTCTTCAACTCTACTTTAGGAGGCACC
CCTTCTTTATAAAATGTAGGCATAGGAG
■■Homology search results ■■ -
sp_hit_id Q6PF55
Definition sp|Q6PF55|AF1L2_XENLA Actin filament-associated protein 1-like 2 OS=Xenopus laevis
Align length 54
Score (bit) 32.3
E-value 0.77
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919858|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_A04.
         (328 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6PF55|AF1L2_XENLA Actin filament-associated protein 1-like 2...    32   0.77 
sp|Q53GT1|KLH22_HUMAN Kelch-like protein 22 OS=Homo sapiens GN=K...    30   3.8  
sp|P75712|ALLP_ECOLI Putative allantoin permease OS=Escherichia ...    30   3.8  
sp|Q0V8T9|CTP5A_MOUSE Contactin associated protein like 5-1 OS=M...    30   5.0  
sp|Q8TAE8|G45IP_HUMAN Growth arrest and DNA-damage-inducible pro...    29   8.5  

>sp|Q6PF55|AF1L2_XENLA Actin filament-associated protein 1-like 2
           OS=Xenopus laevis GN=afap1l2 PE=2 SV=1
          Length = 811

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -3

Query: 296 PPKVELKKIPTTRAKSPKLGRRSSIGIHSESPRGNARCNEDGNLEKGSGKNYME 135
           PPK+  +K+P ++  SP+       G + E+   NA  N+DG     S ++Y E
Sbjct: 108 PPKIITEKLPVSKCDSPE-------GYYEEAEPYNASFNDDGEAVSSSYESYDE 154


>sp|Q53GT1|KLH22_HUMAN Kelch-like protein 22 OS=Homo sapiens
           GN=KLHL22 PE=2 SV=2
          Length = 634

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 149 CQIPSQGSHPHCTGRSHVGSQN 214
           C++P+Q SHPHC   ++  +Q+
Sbjct: 11  CKLPAQPSHPHCVNNTYRSAQH 32


>sp|P75712|ALLP_ECOLI Putative allantoin permease OS=Escherichia
           coli (strain K12) GN=ybbW PE=1 SV=2
          Length = 484

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -1

Query: 232 GVLLVSILRAHVGTPGAMRMGTLRRDLARIIWRDQRYLCGDL 107
           GV    ILRA  G  GA+  G LR  +A I+W   +   G L
Sbjct: 88  GVPFAMILRASYGVRGALFPGLLRGGIAAIMWFGLQCYAGSL 129


>sp|Q0V8T9|CTP5A_MOUSE Contactin associated protein like 5-1 OS=Mus
           musculus GN=Cntnap5a PE=2 SV=1
          Length = 1304

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +3

Query: 198 TWALRMDTNRTPSPKFWRLGPSCRNLLQLYFRRH 299
           T  + MDTNRT S   WR+GP     L+ Y  RH
Sbjct: 760 TQIIIMDTNRTNSEAAWRIGP-----LRCYGDRH 788


>sp|Q8TAE8|G45IP_HUMAN Growth arrest and DNA-damage-inducible
           proteins-interacting protein 1 OS=Homo sapiens
           GN=GADD45GIP1 PE=1 SV=1
          Length = 222

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 10/47 (21%)
 Frame = +3

Query: 150 ARSLLKVPILIAPGVPTWALRMDTNRTPSPKF----------WRLGP 260
           ARSLL V   +APG   +  R    R P P++          W+LGP
Sbjct: 8   ARSLLGVAATLAPGSRGYRARPPPRRRPGPRWPDPEDLLTPRWQLGP 54
tr_hit_id A9P9R6
Definition tr|A9P9R6|A9P9R6_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length 60
Score (bit) 68.9
E-value 1.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919858|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_A04.
         (328 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9P9R6|A9P9R6_POPTR Putative uncharacterized protein OS=Popul...    69   1e-10
tr|Q7XYW3|Q7XYW3_BRANA Seed specific protein Bn15D14A (Fragment)...    64   3e-09
tr|Q6ZLF9|Q6ZLF9_ORYSJ Putative seed specific protein OS=Oryza s...    63   6e-09
tr|B8B7W6|B8B7W6_ORYSI Putative uncharacterized protein OS=Oryza...    63   6e-09
tr|B6TVC9|B6TVC9_MAIZE Seed specific protein Bn15D14A OS=Zea may...    63   6e-09
tr|A9PG41|A9PG41_POPTR Putative uncharacterized protein OS=Popul...    63   6e-09
tr|A3BHA5|A3BHA5_ORYSJ Putative uncharacterized protein OS=Oryza...    63   6e-09
tr|B7ZXM3|B7ZXM3_MAIZE Putative uncharacterized protein OS=Zea m...    60   4e-08
tr|B6U8B2|B6U8B2_MAIZE WDL1 OS=Zea mays PE=2 SV=1                      60   4e-08
tr|B5TV73|B5TV73_CAMSI Putative uncharacterized protein OS=Camel...    60   4e-08
tr|B4FBB6|B4FBB6_MAIZE Putative uncharacterized protein OS=Zea m...    60   4e-08
tr|Q69Q42|Q69Q42_ORYSJ Os06g0606800 protein OS=Oryza sativa subs...    60   5e-08
tr|Q69Q41|Q69Q41_ORYSJ BRI1-KD interacting protein 118-like OS=O...    60   5e-08
tr|A7P5T9|A7P5T9_VITVI Chromosome chr4 scaffold_6, whole genome ...    60   7e-08
tr|Q9LS82|Q9LS82_ARATH Gb|AAF04893.1 OS=Arabidopsis thaliana PE=...    59   9e-08
tr|Q84WL6|Q84WL6_ARATH At3g23090 (Putative uncharacterized prote...    59   9e-08
tr|Q9SJ62|Q9SJ62_ARATH Expressed protein (Putative uncharacteriz...    59   1e-07
tr|A7QMQ2|A7QMQ2_VITVI Chromosome undetermined scaffold_127, who...    59   2e-07
tr|A5C3U3|A5C3U3_VITVI Putative uncharacterized protein OS=Vitis...    59   2e-07
tr|Q851Q0|Q851Q0_ORYSJ Os03g0799100 protein OS=Oryza sativa subs...    57   5e-07
tr|Q761Z8|Q761Z8_ORYSJ BRI1-KD interacting protein 116 (Fragment...    57   5e-07
tr|Q761Z6|Q761Z6_ORYSJ BRI1-KD interacting protein 118 (Fragment...    57   5e-07
tr|Q6Z797|Q6Z797_ORYSJ Putative BRI1-KD interacting protein OS=O...    57   5e-07
tr|Q10C08|Q10C08_ORYSJ Targeting protein for Xklp2 containing pr...    57   5e-07
tr|Q0E303|Q0E303_ORYSJ Os02g0200800 protein (Fragment) OS=Oryza ...    57   5e-07
tr|B8ALB9|B8ALB9_ORYSI Putative uncharacterized protein OS=Oryza...    57   5e-07
tr|A3ANN7|A3ANN7_ORYSJ Putative uncharacterized protein OS=Oryza...    57   5e-07
tr|A3A489|A3A489_ORYSJ Putative uncharacterized protein OS=Oryza...    57   5e-07
tr|A2X244|A2X244_ORYSI Putative uncharacterized protein OS=Oryza...    57   5e-07
tr|B4G189|B4G189_MAIZE Putative uncharacterized protein OS=Zea m...    57   6e-07

>tr|A9P9R6|A9P9R6_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 404

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
 Frame = -3

Query: 326 PMPTFYKEGVPPKVELKKIPTTRAKSPKLGRRSSI--GIHSESP-RGNARCNEDGNLEKG 156
           PMP+FY EG PPKVELKK+P TRAKSPKLGRR S   G++S  P R    C +  N  +G
Sbjct: 291 PMPSFYHEGPPPKVELKKLPPTRAKSPKLGRRKSCSNGVNSSQPDRVKGACGDGNNQSQG 350


>tr|Q7XYW3|Q7XYW3_BRANA Seed specific protein Bn15D14A (Fragment)
           OS=Brassica napus PE=2 SV=1
          Length = 267

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 34/70 (48%), Positives = 41/70 (58%)
 Frame = -3

Query: 326 PMPTFYKEGVPPKVELKKIPTTRAKSPKLGRRSSIGIHSESPRGNARCNEDGNLEKGSGK 147
           PMP FY EG PPKVELKK P TRAKSPKLGRR++               ++GN  KG  +
Sbjct: 174 PMPNFYHEGPPPKVELKKPPPTRAKSPKLGRRNT---------------KEGNRSKGVSR 218

Query: 146 NYMERSTIFV 117
            +  R T+ V
Sbjct: 219 RHETRKTLIV 228


>tr|Q6ZLF9|Q6ZLF9_ORYSJ Putative seed specific protein OS=Oryza
           sativa subsp. japonica GN=OJ1339_B08.5-1 PE=4 SV=1
          Length = 366

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = -3

Query: 326 PMPTFYKEGVPPKVELKKIPTTRAKSPKLGRRSSIGIHSESPRG 195
           PMP+FY+EG PPKVELKK+P TRAKSPKL RR S      +P G
Sbjct: 260 PMPSFYQEGPPPKVELKKVPPTRAKSPKLTRRKSCSDTPHTPEG 303


>tr|B8B7W6|B8B7W6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25164 PE=4 SV=1
          Length = 421

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = -3

Query: 326 PMPTFYKEGVPPKVELKKIPTTRAKSPKLGRRSSIGIHSESPRG 195
           PMP+FY+EG PPKVELKK+P TRAKSPKL RR S      +P G
Sbjct: 315 PMPSFYQEGPPPKVELKKVPPTRAKSPKLTRRKSCSDTPHTPEG 358


>tr|B6TVC9|B6TVC9_MAIZE Seed specific protein Bn15D14A OS=Zea mays
           PE=2 SV=1
          Length = 358

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = -3

Query: 326 PMPTFYKEGVPPKVELKKIPTTRAKSPKLGRRSSIGIHSESPRG 195
           PMP+FY+EG PPKVELKK+P TRAKSPKL RR S      +P G
Sbjct: 246 PMPSFYQEGPPPKVELKKVPPTRAKSPKLTRRKSCSETPHTPEG 289


>tr|A9PG41|A9PG41_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 422

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
 Frame = -3

Query: 326 PMPTFYKEGVPPKVELKKIPTTRAKSPKLGRRSSIGIHSESPRGNARCNEDGNL---EKG 156
           PMP+FY+E  P KVELKKIPTTRAKSPKLGR+ S    ++S   N++ N  G L   EK 
Sbjct: 262 PMPSFYQEPAPLKVELKKIPTTRAKSPKLGRKKSPS-PADSEGNNSQSNRSGRLSLDEKI 320

Query: 155 SGK 147
           S K
Sbjct: 321 SSK 323


>tr|A3BHA5|A3BHA5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_022427 PE=4 SV=1
          Length = 455

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = -3

Query: 326 PMPTFYKEGVPPKVELKKIPTTRAKSPKLGRRSSIGIHSESPRG 195
           PMP+FY+EG PPKVELKK+P TRAKSPKL RR S      +P G
Sbjct: 290 PMPSFYQEGPPPKVELKKVPPTRAKSPKLTRRKSCSDTPHTPEG 333


>tr|B7ZXM3|B7ZXM3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 385

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 32/49 (65%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
 Frame = -3

Query: 326 PMPTFYKEGVPPKVELKKIPTTRAKSPKLGR--RSSIGIHSESPRGNAR 186
           PMP+FYKE  PPKVELKKIPTTRA+SPKLGR   +S G    +P   AR
Sbjct: 255 PMPSFYKEPPPPKVELKKIPTTRARSPKLGRSKNTSSGGTEGNPNPPAR 303


>tr|B6U8B2|B6U8B2_MAIZE WDL1 OS=Zea mays PE=2 SV=1
          Length = 386

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 32/49 (65%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
 Frame = -3

Query: 326 PMPTFYKEGVPPKVELKKIPTTRAKSPKLGR--RSSIGIHSESPRGNAR 186
           PMP+FYKE  PPKVELKKIPTTRA+SPKLGR   +S G    +P   AR
Sbjct: 255 PMPSFYKEPPPPKVELKKIPTTRARSPKLGRSKNTSSGGTEGNPNPPAR 303


>tr|B5TV73|B5TV73_CAMSI Putative uncharacterized protein OS=Camellia
           sinensis PE=2 SV=1
          Length = 376

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
 Frame = -3

Query: 326 PMPTFYKEGVPPKVELKKIPTTRAKSPKLGRRSSIG-IHSESPRGNARCNEDGNLEKGSG 150
           P+P+FY+EG PPK ELKK+P TRAKSPKL RR S G +   S      CN       GS 
Sbjct: 256 PVPSFYQEGPPPKKELKKLPLTRAKSPKLNRRKSCGDVAGSSSEEKGVCNRAIRHSFGSR 315

Query: 149 KN 144
           K+
Sbjct: 316 KD 317