BP919856
Clone id YMU001_000130_A02
Library
Length 514
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000130_A02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGCTATTGCAAGTCTGCCGAATGCAGGGGTTTTCTGAATTGAGTCTAGTTGGTGGAGTTT
TGTCAGGCAGAATTCCTAGCTCTTGGAATCAACTGACTCTGTGCTGACCGAGATGTGGAG
GCGCTTCATTAGAGTTATGTGGGTTCTCCAACCCATCAGTATGTGAAGCGGGTGCAGGAA
GCTGGCAACAGGGCTGCGAATTCGACTTTCAGCTGTTGTATCAAGCATGTAAAGTCCTCC
ACAATGGTTGTAAAGTAAAGGCTCATATCTTTGTTCTTTTAGAATCTAGTACTCTGAGCT
TGTAGTCTTCATCAAAAATTGTATCAGTACAGATTCATTATTACTACATATGGCTCGATT
CCCTCGTCTAACAATTTGTACTAAATTACTGTTGATGTACAGTAGGAAGCCACTCTTCAT
TCTGCGACATTGCTTAAATTATGGGCTTCATTAACAATGTAATTGAAGGATTGGTTGATT
GGTTTTCACCTTCAGCAATCCAGATGTATGATCA
■■Homology search results ■■ -
sp_hit_id Q8BYK5
Definition sp|Q8BYK5|PHAR3_MOUSE Phosphatase and actin regulator 3 OS=Mus musculus
Align length 59
Score (bit) 31.6
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919856|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_A02.
(514 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8BYK5|PHAR3_MOUSE Phosphatase and actin regulator 3 OS=Mus m... 32 2.3
sp|Q91J26|C2_BCTVC Protein C2 OS=Beet curly top virus (strain Ca... 31 3.9
sp|A1T007|METE_PSYIN 5-methyltetrahydropteroyltriglutamate--homo... 30 5.1
sp|P78004|DNAJ_MYCPN Chaperone protein dnaJ OS=Mycoplasma pneumo... 30 8.7

>sp|Q8BYK5|PHAR3_MOUSE Phosphatase and actin regulator 3 OS=Mus
musculus GN=Phactr3 PE=1 SV=2
Length = 558

Score = 31.6 bits (70), Expect = 2.3
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -1

Query: 208 KSNSQPCCQLPAPASHTDGLENPHNSNEAPPHLGQHRVS*FQELGILPDKTPPTRLNSE 32
+S S P + A+ TD ENP ++ PP + VS GI +TPP R NS+
Sbjct: 16 RSQSDPSFLSDSSATSTDAGENPDEMDQTPPARSEPLVS-----GI---RTPPVRRNSK 66


>sp|Q91J26|C2_BCTVC Protein C2 OS=Beet curly top virus (strain
California/Logan) GN=C2 PE=1 SV=1
Length = 173

Score = 30.8 bits (68), Expect = 3.9
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -2

Query: 282 LKEQRYEPLLYNHCGGLYMLDTTAESRIRSPVASFLHPLHILMGWRTHITL 130
LK Q+ +PL H Y++ +A S++RS + HP + + H T+
Sbjct: 29 LKNQKMKPLSPGH----YIIQPSANSKVRSLITKQQHPRKVTLPCNCHFTI 75


>sp|A1T007|METE_PSYIN
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Psychromonas ingrahamii (strain 37)
GN=metE PE=3 SV=1
Length = 767

Score = 30.4 bits (67), Expect = 5.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1

Query: 208 KSNSQPCCQLPAPASHTDGLENPHNSNEAPPHLGQHRV 95
K+N + C+LP H D + PH + A +LG ++
Sbjct: 257 KNNLKLACELPIAGLHLDAVNAPHEIDSAIDYLGTDKI 294


>sp|P78004|DNAJ_MYCPN Chaperone protein dnaJ OS=Mycoplasma
pneumoniae GN=dnaJ PE=3 SV=1
Length = 390

Score = 29.6 bits (65), Expect = 8.7
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1

Query: 184 QLPAPASHTDGLENPHNSNEAPPHLGQHRVS*FQELGILPDK 59
Q+PA H D L + H NE H+G+ V +G+LP K
Sbjct: 241 QIPAGIYHGDALVDDHGGNEFGGHVGKLVV----HVGVLPSK 278


tr_hit_id Q6YTK4
Definition tr|Q6YTK4|Q6YTK4_ORYSJ Os08g0266400 protein OS=Oryza sativa subsp. japonica
Align length 57
Score (bit) 33.9
E-value 4.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919856|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_A02.
(514 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6YTK4|Q6YTK4_ORYSJ Os08g0266400 protein OS=Oryza sativa subs... 34 4.8
tr|A2YT72|A2YT72_ORYSI Putative uncharacterized protein OS=Oryza... 34 4.8
tr|B4KZ60|B4KZ60_DROMO GI12913 OS=Drosophila mojavensis GN=GI129... 33 6.2
tr|Q72IS1|Q72IS1_THET2 Putative uncharacterized protein OS=Therm... 33 8.3
tr|Q5SIE8|Q5SIE8_THET8 Putative uncharacterized protein TTHA1426... 33 8.3

>tr|Q6YTK4|Q6YTK4_ORYSJ Os08g0266400 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0023I13.31 PE=4 SV=1
Length = 768

Score = 33.9 bits (76), Expect = 4.8
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3

Query: 12 VCRMQGFSELSLVGGVLSGRIPSSWNQLTLC*PRCGGASLELCGFSNPSVCEAGAGS 182
+ + S L+L LSG IPS + TL P + LCGF C G+ S
Sbjct: 641 ISNLMSLSSLNLSNNHLSGEIPSGYQLRTLADPSIYSNNFGLCGFPLNISCSDGSNS 697


>tr|A2YT72|A2YT72_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_28520 PE=4 SV=1
Length = 768

Score = 33.9 bits (76), Expect = 4.8
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3

Query: 12 VCRMQGFSELSLVGGVLSGRIPSSWNQLTLC*PRCGGASLELCGFSNPSVCEAGAGS 182
+ + S L+L LSG IPS + TL P + LCGF C G+ S
Sbjct: 641 ISNLMSLSSLNLSNNHLSGEIPSGYQLRTLADPSIYSNNFGLCGFPLNISCSDGSNS 697


>tr|B4KZ60|B4KZ60_DROMO GI12913 OS=Drosophila mojavensis GN=GI12913
PE=4 SV=1
Length = 472

Score = 33.5 bits (75), Expect = 6.2
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +3

Query: 114 CGGASLELCGFSNPSVCEAGAGSWQQGCEFDFQ-----LLYQACKVLHNGCKVKAHIF 272
CGG+ + SNP CEAG G++ G + D + ++Y A H+G K KAH F
Sbjct: 353 CGGSCRNVHVKSNPYQCEAGYGNY-GGHQLDAEDTDDGIIYVAS---HSGSKAKAHYF 406


>tr|Q72IS1|Q72IS1_THET2 Putative uncharacterized protein OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GN=TT_C1061 PE=4 SV=1
Length = 240

Score = 33.1 bits (74), Expect = 8.3
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2

Query: 261 PLLYNHCGGLYMLDTTAESRIRSPVASFLHPLHILMGWRTHITLMKRL 118
PLLY H GG D R+ + FLHP+ + GW + +K L
Sbjct: 10 PLLYLHRGGGGFFDLLLAQVTRARLPLFLHPVAMEEGWEAFLPCLKGL 57


>tr|Q5SIE8|Q5SIE8_THET8 Putative uncharacterized protein TTHA1426
OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM
579) GN=TTHA1426 PE=4 SV=1
Length = 240

Score = 33.1 bits (74), Expect = 8.3
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2

Query: 261 PLLYNHCGGLYMLDTTAESRIRSPVASFLHPLHILMGWRTHITLMKRL 118
PLLY H GG D R+ + FLHP+ + GW + +K L
Sbjct: 10 PLLYLHRGGGGFFDLLLAQVTRARLPLFLHPVAMEEGWEAFLPCLKGL 57