BP919831 |
Clone id |
YMU001_000129_F06 |
Library |
YMU01 |
Length |
376 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000129_F06. |
Accession |
BP919831 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GCCGCAGGTGAGGAACAAGACAAAAATCTGGTCTCGTCTCAATTGTCTATCCAATGCACT TGATAGCTCCATGTTCTGAATATTGCACTGCTTCTTCAACATTTCGTGATGAGTGCCCAG ATAAAGCATCATGCAAATTCCTTATAAAATAATCTCGGTAATCAGCAGGTAGAGACATGA ATGTGCCTCCCATTAGAATAAATTCAACTTTATCCACACAGTGTCCCAGCCTTTTCAATT GATCTATTCGACTGCGAGCTTGTACGTAGGGATTGTACCTGGCTCGAATCGCACGCATGC TTGTGGGCTCATATCCAGTATAGGTCTGAGTACTGTACTCAAAATCAGAGTCAGGACCAC CAGGACAGTAGACACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7X7L3 |
Definition |
sp|Q7X7L3|ELP3_ORYSJ Elongator complex protein 3 OS=Oryza sativa subsp. japonica |
Align length |
125 |
Score (bit) |
246.0 |
E-value |
3.0e-65 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0JC95 |
Definition |
tr|Q0JC95|Q0JC95_ORYSJ Os04g0484900 protein OS=Oryza sativa subsp. japonica |
Align length |
125 |
Score (bit) |
246.0 |
E-value |
4.0e-64 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919831|Adiantum capillus-veneris mRNA, clone: YMU001_000129_F06. (376 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q0JC95|Q0JC95_ORYSJ Os04g0484900 protein OS=Oryza sativa subs... 246 4e-64 tr|Q01IF8|Q01IF8_ORYSA H0805A05.12 protein OS=Oryza sativa GN=H0... 246 4e-64 tr|A2XUT6|A2XUT6_ORYSI Putative uncharacterized protein OS=Oryza... 246 4e-64 tr|B4FJY4|B4FJY4_MAIZE Putative uncharacterized protein OS=Zea m... 243 3e-63 tr|A7QZ22|A7QZ22_VITVI Chromosome chr17 scaffold_263, whole geno... 241 1e-62 tr|A9T8U2|A9T8U2_PHYPA RNA polymerase II elongator complex, subu... 241 1e-62 tr|Q0Z9V9|Q0Z9V9_WHEAT Histone acetyltransferase HAT2 OS=Triticu... 235 9e-61 tr|A9V8X8|A9V8X8_MONBE Predicted protein OS=Monosiga brevicollis... 220 2e-56 tr|Q4RF44|Q4RF44_TETNG Chromosome 14 SCAF15120, whole genome sho... 218 1e-55 tr|Q0IF73|Q0IF73_AEDAE Elongator component, putative OS=Aedes ae... 216 3e-55 tr|B3S1C1|B3S1C1_TRIAD Putative uncharacterized protein OS=Trich... 216 4e-55 tr|B8CA75|B8CA75_THAPS Histone acetyltransferase gcn5-type hat O... 216 6e-55 tr|Q00VG8|Q00VG8_OSTTA OJ000223_09.4 [Oryza sativa (ISS) OS=Ostr... 215 8e-55 tr|B4LT68|B4LT68_DROVI GJ20018 OS=Drosophila virilis GN=GJ20018 ... 214 2e-54 tr|A8PTD7|A8PTD7_BRUMA RE35395p, putative OS=Brugia malayi GN=Bm... 214 2e-54 tr|A4S727|A4S727_OSTLU Predicted protein OS=Ostreococcus lucimar... 213 3e-54 tr|B4DKA4|B4DKA4_HUMAN cDNA FLJ58009, highly similar to Homo sap... 213 3e-54 tr|B4DIG1|B4DIG1_HUMAN cDNA FLJ58185, highly similar to Homo sap... 213 3e-54 tr|A7SA82|A7SA82_NEMVE Predicted protein OS=Nematostella vectens... 213 4e-54 tr|Q29LJ9|Q29LJ9_DROPS GA13723 OS=Drosophila pseudoobscura pseud... 212 6e-54 tr|B4QA75|B4QA75_DROSI GD23288 OS=Drosophila simulans GN=GD23288... 212 6e-54 tr|B4NYK5|B4NYK5_DROYA GE18291 OS=Drosophila yakuba GN=GE18291 P... 212 6e-54 tr|B4I392|B4I392_DROSE GM18474 OS=Drosophila sechellia GN=GM1847... 212 6e-54 tr|B4GPU7|B4GPU7_DROPE GL15175 OS=Drosophila persimilis GN=GL151... 212 6e-54 tr|B3N3S3|B3N3S3_DROER GG25004 OS=Drosophila erecta GN=GG25004 P... 212 6e-54 tr|B4KER3|B4KER3_DROMO GI22150 OS=Drosophila mojavensis GN=GI221... 211 1e-53 tr|B4JCL5|B4JCL5_DROGR GH10129 OS=Drosophila grimshawi GN=GH1012... 211 1e-53 tr|B4DPB7|B4DPB7_HUMAN cDNA FLJ58601, highly similar to Homo sap... 211 1e-53 tr|Q7PJ82|Q7PJ82_ANOGA AGAP008300-PA OS=Anopheles gambiae GN=AGA... 211 2e-53 tr|B6MKG1|B6MKG1_BRAFL Putative uncharacterized protein OS=Branc... 211 2e-53
>tr|Q0JC95|Q0JC95_ORYSJ Os04g0484900 protein OS=Oryza sativa subsp. japonica GN=Os04g0484900 PE=2 SV=1 Length = 573
Score = 246 bits (628), Expect = 4e-64 Identities = 116/125 (92%), Positives = 120/125 (96%) Frame = -1
Query: 376 CVYCPGGPDSDFEYSTQTYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHCVDKVEFI 197 CVYCPGGPDSDFEYSTQ+YTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGH VDKVEFI Sbjct: 135 CVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFI 194
Query: 196 LMGGTFMSLPADYRDYFIRNLHDALSGHSSRNVEEAVQYSEHGAIKCIG*TIETRPDFCL 17 LMGGTFMSLPADYRDYFIRNLHDALSGH+S NVEEAV YSEHGA+KCIG TIETRPD+CL Sbjct: 195 LMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVCYSEHGAVKCIGMTIETRPDYCL 254
Query: 16 VPHLR 2 PHLR Sbjct: 255 GPHLR 259
>tr|Q01IF8|Q01IF8_ORYSA H0805A05.12 protein OS=Oryza sativa GN=H0805A05.12 PE=4 SV=1 Length = 573
Score = 246 bits (628), Expect = 4e-64 Identities = 116/125 (92%), Positives = 120/125 (96%) Frame = -1
Query: 376 CVYCPGGPDSDFEYSTQTYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHCVDKVEFI 197 CVYCPGGPDSDFEYSTQ+YTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGH VDKVEFI Sbjct: 135 CVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFI 194
Query: 196 LMGGTFMSLPADYRDYFIRNLHDALSGHSSRNVEEAVQYSEHGAIKCIG*TIETRPDFCL 17 LMGGTFMSLPADYRDYFIRNLHDALSGH+S NVEEAV YSEHGA+KCIG TIETRPD+CL Sbjct: 195 LMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVCYSEHGAVKCIGMTIETRPDYCL 254
Query: 16 VPHLR 2 PHLR Sbjct: 255 GPHLR 259
>tr|A2XUT6|A2XUT6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16373 PE=4 SV=1 Length = 573
Score = 246 bits (628), Expect = 4e-64 Identities = 116/125 (92%), Positives = 120/125 (96%) Frame = -1
Query: 376 CVYCPGGPDSDFEYSTQTYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHCVDKVEFI 197 CVYCPGGPDSDFEYSTQ+YTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGH VDKVEFI Sbjct: 135 CVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFI 194
Query: 196 LMGGTFMSLPADYRDYFIRNLHDALSGHSSRNVEEAVQYSEHGAIKCIG*TIETRPDFCL 17 LMGGTFMSLPADYRDYFIRNLHDALSGH+S NVEEAV YSEHGA+KCIG TIETRPD+CL Sbjct: 195 LMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVCYSEHGAVKCIGMTIETRPDYCL 254
Query: 16 VPHLR 2 PHLR Sbjct: 255 GPHLR 259
>tr|B4FJY4|B4FJY4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 570
Score = 243 bits (621), Expect = 3e-63 Identities = 114/125 (91%), Positives = 119/125 (95%) Frame = -1
Query: 376 CVYCPGGPDSDFEYSTQTYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHCVDKVEFI 197 CVYCPGGPDSDFEYSTQ+YTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGH VDKVEFI Sbjct: 132 CVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFI 191
Query: 196 LMGGTFMSLPADYRDYFIRNLHDALSGHSSRNVEEAVQYSEHGAIKCIG*TIETRPDFCL 17 LMGGTFMSLPADYRDYFIRNLHDALSGH+S NVEEA+ YSEH A+KCIG TIETRPD+CL Sbjct: 192 LMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAICYSEHSAVKCIGMTIETRPDYCL 251
Query: 16 VPHLR 2 PHLR Sbjct: 252 GPHLR 256
>tr|A7QZ22|A7QZ22_VITVI Chromosome chr17 scaffold_263, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010464001 PE=4 SV=1 Length = 563
Score = 241 bits (616), Expect = 1e-62 Identities = 114/125 (91%), Positives = 118/125 (94%) Frame = -1
Query: 376 CVYCPGGPDSDFEYSTQTYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHCVDKVEFI 197 CVYCPGGPDSDFEYSTQ+YTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGH VDKVEFI Sbjct: 125 CVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFI 184
Query: 196 LMGGTFMSLPADYRDYFIRNLHDALSGHSSRNVEEAVQYSEHGAIKCIG*TIETRPDFCL 17 LMGGTFMSLPA+YRDYF RNLHDALSGH+S NVEEAV YSEH AIKCIG TIETRPD+CL Sbjct: 185 LMGGTFMSLPAEYRDYFTRNLHDALSGHTSANVEEAVAYSEHSAIKCIGMTIETRPDYCL 244
Query: 16 VPHLR 2 PHLR Sbjct: 245 GPHLR 249
>tr|A9T8U2|A9T8U2_PHYPA RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase OS=Physcomitrella patens subsp. patens GN=HAG1502 PE=4 SV=1 Length = 566
Score = 241 bits (615), Expect = 1e-62 Identities = 112/125 (89%), Positives = 119/125 (95%) Frame = -1
Query: 376 CVYCPGGPDSDFEYSTQTYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHCVDKVEFI 197 CVYCPGGPDSDFEYSTQ+YTGYEPTSMRAIRARYNPYVQAR RIDQLKRLGH VDKVEFI Sbjct: 124 CVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARGRIDQLKRLGHSVDKVEFI 183
Query: 196 LMGGTFMSLPADYRDYFIRNLHDALSGHSSRNVEEAVQYSEHGAIKCIG*TIETRPDFCL 17 LMGGTFMSLPADYRDYFIRNLHDALSGH+S +V+EAV+YSEHG +KCIG TIETRPD+CL Sbjct: 184 LMGGTFMSLPADYRDYFIRNLHDALSGHTSHDVDEAVRYSEHGNVKCIGLTIETRPDYCL 243
Query: 16 VPHLR 2 PHLR Sbjct: 244 GPHLR 248
>tr|Q0Z9V9|Q0Z9V9_WHEAT Histone acetyltransferase HAT2 OS=Triticum aestivum PE=2 SV=1 Length = 569
Score = 235 bits (599), Expect = 9e-61 Identities = 111/125 (88%), Positives = 117/125 (93%) Frame = -1
Query: 376 CVYCPGGPDSDFEYSTQTYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHCVDKVEFI 197 CVY PGGPDSDFEYS+Q+Y+GYEPTSMRAIRARYNPYVQARSRIDQLKRLGH DKVEFI Sbjct: 131 CVYWPGGPDSDFEYSSQSYSGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSADKVEFI 190
Query: 196 LMGGTFMSLPADYRDYFIRNLHDALSGHSSRNVEEAVQYSEHGAIKCIG*TIETRPDFCL 17 LMGGTFMSLPADYRDYFIRNLHDALSGH+S NVEEAV YSEH A+KCIG TIETRPD+CL Sbjct: 191 LMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVCYSEHSAVKCIGMTIETRPDYCL 250
Query: 16 VPHLR 2 PHLR Sbjct: 251 GPHLR 255
>tr|A9V8X8|A9V8X8_MONBE Predicted protein OS=Monosiga brevicollis GN=38587 PE=4 SV=1 Length = 551
Score = 220 bits (561), Expect = 2e-56 Identities = 101/124 (81%), Positives = 112/124 (90%) Frame = -1
Query: 376 CVYCPGGPDSDFEYSTQTYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHCVDKVEFI 197 CVYCPGGPDSDFEYSTQ+YTGYEPTSMRAIRARYNPY+Q R R++QLK LGH VDKVEFI Sbjct: 97 CVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQTRHRVEQLKSLGHSVDKVEFI 156
Query: 196 LMGGTFMSLPADYRDYFIRNLHDALSGHSSRNVEEAVQYSEHGAIKCIG*TIETRPDFCL 17 +MGGTFM+L A+YRDYFIRNLHDALSGH+S NV+EAV+YSE KCIG TIETRPD+CL Sbjct: 157 VMGGTFMALDAEYRDYFIRNLHDALSGHTSNNVKEAVEYSERSRTKCIGITIETRPDYCL 216
Query: 16 VPHL 5 PHL Sbjct: 217 RPHL 220
>tr|Q4RF44|Q4RF44_TETNG Chromosome 14 SCAF15120, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00035489001 PE=4 SV=1 Length = 650
Score = 218 bits (555), Expect = 1e-55 Identities = 100/124 (80%), Positives = 111/124 (89%) Frame = -1
Query: 376 CVYCPGGPDSDFEYSTQTYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHCVDKVEFI 197 CVYCPGGPDSDFEYSTQ+YTGYEPTSMRAIRARY+PY+Q R R++QLK+LGH VDKVEFI Sbjct: 103 CVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFI 162
Query: 196 LMGGTFMSLPADYRDYFIRNLHDALSGHSSRNVEEAVQYSEHGAIKCIG*TIETRPDFCL 17 +MGGTFMSLP DYRDYFIRNLHDALSGH+S NV EAV+YSE KC+G TIETRPD+CL Sbjct: 163 VMGGTFMSLPEDYRDYFIRNLHDALSGHTSNNVAEAVRYSERSNTKCVGITIETRPDYCL 222
Query: 16 VPHL 5 HL Sbjct: 223 KRHL 226
>tr|Q0IF73|Q0IF73_AEDAE Elongator component, putative OS=Aedes aegypti GN=AAEL006400 PE=4 SV=1 Length = 549
Score = 216 bits (551), Expect = 3e-55 Identities = 100/124 (80%), Positives = 111/124 (89%) Frame = -1
Query: 376 CVYCPGGPDSDFEYSTQTYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHCVDKVEFI 197 CVYCPGGPDSDFEYSTQ+YTGYEPTSMRAIRARYNP++Q R R++QLK+LGH VDKVEFI Sbjct: 111 CVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPFLQTRHRVEQLKQLGHSVDKVEFI 170
Query: 196 LMGGTFMSLPADYRDYFIRNLHDALSGHSSRNVEEAVQYSEHGAIKCIG*TIETRPDFCL 17 +MGGTFM LP DYRDYFIRNLHDALSGH+S +VEEAV+YSE KCIG TIETRPD+CL Sbjct: 171 VMGGTFMCLPEDYRDYFIRNLHDALSGHTSSSVEEAVRYSEKSHTKCIGITIETRPDYCL 230
Query: 16 VPHL 5 HL Sbjct: 231 KRHL 234
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