BP919809
Clone id YMU001_000129_D07
Library
Length 283
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000129_D07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATTGGGCAAACCGATCCCAGTCCTCTTGGATGCCTTCCTCAAAGCGTAGAGGAAAAAAAT
TTGGCAGAAAATTCAGCCTTGAATTGTTGTTGTAAGTTCCTTGCAGAGCTTTGGTATACC
ACCAAGTACTTGCAATCCCCTTGAGGTGTTTCGTCACATGCCTCACCTTCGACGCTTCTC
AGAAATTGCCGTTTGCAAAGGCAACTTCATACTGTCAAATGAAAGCGGTAGCTTTTGGGG
CATATTCTCTTCCATCAAAAGTATCAAACTTGACCGGAATGTT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919809|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_D07.
(283 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A7PQ07
Definition tr|A7PQ07|A7PQ07_VITVI Chromosome chr18 scaffold_24, whole genome shotgun sequence OS=Vitis vinifera
Align length 38
Score (bit) 34.7
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919809|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_D07.
(283 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PQ07|A7PQ07_VITVI Chromosome chr18 scaffold_24, whole genom... 35 2.5
tr|A5AGC7|A5AGC7_VITVI Putative uncharacterized protein OS=Vitis... 33 5.5

>tr|A7PQ07|A7PQ07_VITVI Chromosome chr18 scaffold_24, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021865001
PE=4 SV=1
Length = 1160

Score = 34.7 bits (78), Expect = 2.5
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1

Query: 22 PLGCLPQSVEEKNLAENSALNCCCKFLAELWYTTKYLQ 135
PL LP + KNL E LN CC ++ ELW K+++
Sbjct: 619 PLKSLPSNFHPKNLVE---LNLCCCYVEELWKGVKHME 653


>tr|A5AGC7|A5AGC7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_006445 PE=4 SV=1
Length = 196

Score = 33.5 bits (75), Expect = 5.5
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -1

Query: 283 NIPVKFDTFDGREYAPKATAFI*QYEVAFANGNF*EASKVRHVTKHLKGIASTWW 119
NI V F G E + ++ + E F N E KV+ V LKG S+WW
Sbjct: 111 NIKVBIPHFTGEEQLXEVLDWLNEVERVFEFLNLPENKKVKMVVIKLKGYXSSWW 165