BP919808
Clone id YMU001_000129_D06
Library
Length 483
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000129_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAGTAAAAAAAAATCGTTTCAAGTTGCAAAAGAACTATAGATGGATGGGTTACCCCCCTC
TTTGGCACTGTCAAGGGCATTCTCCTAAGCATGCCACATCAACAAATCCAGCATGGTGCC
ACTGAAAAACAGAAGCCTTCTAACGCCTCCTTGTGTGCAGATTGCTTTTCTATTATGAAC
AGAGATTTGTCACATTAAGTGTGCTCCTCTGCCAAAATAGCTGGAGCTACAGGAAGTTGC
ATGAGCATCTCCAGTTTGAATCCATTCCTTTGACAAAGGTTCTAAGAAATGAGGGATGTA
AATGAAGAAGTTACAAATTTCCCAGCTTTCCCAATCCCACTGCTCACTAAGCCTGCTCCA
CTACCCACTATGCCCACTCCTCCGGAGACCAGCCTCCCTGCTCCCCCAACAACATCACCA
AGGGCATCCATGGTTCCATCAATCATGCCCATTTCTGCTTTCTTCTTCTTGGCTTCCATA
AAT
■■Homology search results ■■ -
sp_hit_id Q96680
Definition sp|Q96680|PIVA2_ADECR Maturation protein OS=Canine adenovirus serotype 1 (strain RI261)
Align length 71
Score (bit) 31.2
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919808|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_D06.
(483 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q96680|PIVA2_ADECR Maturation protein OS=Canine adenovirus se... 31 2.6
sp|Q91684|DPOG1_XENLA DNA polymerase subunit gamma-1 OS=Xenopus ... 31 2.6
sp|P54099|DPOG1_MOUSE DNA polymerase subunit gamma-1 OS=Mus musc... 31 3.4
sp|A0KVZ2|ASTB_SHESA N-succinylarginine dihydrolase OS=Shewanell... 30 7.5
sp|Q00968|EGF_PIG Pro-epidermal growth factor OS=Sus scrofa GN=E... 29 9.8
sp|Q9QYV8|DPOG1_RAT DNA polymerase subunit gamma-1 OS=Rattus nor... 29 9.8
sp|P54098|DPOG1_HUMAN DNA polymerase subunit gamma-1 OS=Homo sap... 29 9.8

>sp|Q96680|PIVA2_ADECR Maturation protein OS=Canine adenovirus
serotype 1 (strain RI261) GN=PIVA2 PE=3 SV=1
Length = 502

Score = 31.2 bits (69), Expect = 2.6
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1

Query: 55 PLFGTVKGILLSMPHQQIQHGATEKQKPS-NASLCADCFSIMNRDLSH*VCSSAKIAGAT 231
PL KG+LL P ++H ++ +PS + CAD ++ D +H + + G
Sbjct: 46 PLLRCAKGLLLCRPAAGLRHLQNQQNEPSQDPHQCADSCPALHSDRNHLNKEAEAMEGQN 105

Query: 232 GSCMSISSLNP 264
+C S P
Sbjct: 106 PTCSRHESAYP 116


>sp|Q91684|DPOG1_XENLA DNA polymerase subunit gamma-1 OS=Xenopus
laevis GN=polg PE=2 SV=1
Length = 1200

Score = 31.2 bits (69), Expect = 2.6
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2

Query: 398 LLPQ--QHHQGHP-WFHQSCPFLLSSSWLP 478
LLP+ QH GHP W+ + CP L WLP
Sbjct: 530 LLPKRNQHLPGHPGWYRKLCPKLEDPDWLP 559


>sp|P54099|DPOG1_MOUSE DNA polymerase subunit gamma-1 OS=Mus
musculus GN=Polg PE=2 SV=2
Length = 1239

Score = 30.8 bits (68), Expect = 3.4
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2

Query: 398 LLPQ--QHHQGHP-WFHQSCPFLLSSSWLP 478
LLP+ QH GHP W+ Q CP L +W P
Sbjct: 540 LLPKRPQHLPGHPGWYRQLCPRLDDPAWAP 569


>sp|A0KVZ2|ASTB_SHESA N-succinylarginine dihydrolase OS=Shewanella
sp. (strain ANA-3) GN=astB PE=3 SV=1
Length = 444

Score = 29.6 bits (65), Expect = 7.5
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = +3

Query: 162 LLFYYEQRFVTLSVLLCQNSWSYRKLHEHLQFESIPLTKVLRNEGCK*RSYKF 320
+LFY+EQ F+ L + RKL L F +P TKV N K SY F
Sbjct: 261 VLFYHEQAFLNTQAKLDEIR---RKLDTELFFIEVPTTKVAINNAVK--SYLF 308


>sp|Q00968|EGF_PIG Pro-epidermal growth factor OS=Sus scrofa GN=EGF
PE=1 SV=2
Length = 1214

Score = 29.3 bits (64), Expect = 9.8
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = -1

Query: 279 PLSKEWIQTGDAHATSCSSSYFGRGAHLM----*QISVH--NRKAICT 154
P S E I T H CS Y G G H + Q+ VH A CT
Sbjct: 883 PTSSECINTEGGHVCRCSEGYQGDGIHCLDIDECQLGVHTCGENATCT 930


>sp|Q9QYV8|DPOG1_RAT DNA polymerase subunit gamma-1 OS=Rattus
norvegicus GN=Polg PE=2 SV=1
Length = 1216

Score = 29.3 bits (64), Expect = 9.8
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2

Query: 398 LLPQ--QHHQGHP-WFHQSCPFLLSSSWLP 478
LLP+ QH GHP W+ + CP L +W P
Sbjct: 539 LLPKRPQHLPGHPGWYRKLCPRLDDPAWTP 568


>sp|P54098|DPOG1_HUMAN DNA polymerase subunit gamma-1 OS=Homo
sapiens GN=POLG PE=1 SV=1
Length = 1239

Score = 29.3 bits (64), Expect = 9.8
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2

Query: 398 LLPQ--QHHQGHP-WFHQSCPFLLSSSWLP 478
LLP+ QH GHP W+ + CP L +W P
Sbjct: 558 LLPKRPQHLPGHPGWYRKLCPRLDDPAWTP 587


tr_hit_id A4HI28
Definition tr|A4HI28|A4HI28_LEIBR Sulfate transporter-like protein OS=Leishmania braziliensis
Align length 72
Score (bit) 36.6
E-value 0.63
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919808|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_D06.
(483 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4HI28|A4HI28_LEIBR Sulfate transporter-like protein OS=Leish... 37 0.63
tr|A6GSP4|A6GSP4_9BURK Putative uncharacterized protein OS=Limno... 35 1.8
tr|B6HCU7|B6HCU7_PENCH Pc18g02230 protein OS=Penicillium chrysog... 33 7.0

>tr|A4HI28|A4HI28_LEIBR Sulfate transporter-like protein OS=Leishmania
braziliensis GN=LbrM30_V2.0850 PE=4 SV=1
Length = 1984

Score = 36.6 bits (83), Expect = 0.63
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = -1

Query: 411 CWGSREAGLRRSGHSG*WSRLSEQWDWESWEICNFFIYIPHFLEPLSKEWIQTGDAHATS 232
CW +++ G+R S H G R ++ W E+ + F + +P P + W A
Sbjct: 1533 CWSTKKRGVRASEHEGSAWR-NDPWAHETPQEREFRLRVPFISLPKQEAWAHAAAADFAK 1591

Query: 231 CSSSYFGRGAHL 196
C+ YF H+
Sbjct: 1592 CTRLYFTTYLHV 1603


>tr|A6GSP4|A6GSP4_9BURK Putative uncharacterized protein
OS=Limnobacter sp. MED105 GN=LMED105_15943 PE=4 SV=1
Length = 258

Score = 35.0 bits (79), Expect = 1.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3

Query: 457 QKWA*LMEPWMPLVMLLGEQGGWSPEE 377
+KW P PL++ +G +GGWSPEE
Sbjct: 191 RKWTPQANPGEPLIICVGPEGGWSPEE 217


>tr|B6HCU7|B6HCU7_PENCH Pc18g02230 protein OS=Penicillium
chrysogenum Wisconsin 54-1255 GN=Pc18g02230 PE=4 SV=1
Length = 571

Score = 33.1 bits (74), Expect = 7.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1

Query: 357 SRLSEQWDWESWEICNFFIYIPHFLEPLSKEWIQTGDA 244
SRLS D +SW +F +Y P+ P + W+++G A
Sbjct: 306 SRLSFSMDTKSWRDTDFILYTPNIAPPPACSWLRSGMA 343