BP919795
Clone id YMU001_000129_C05
Library
Length 446
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000129_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CAGCAAACAAACTGTGCGAAAGTGAGCAAGTCAAAAGAAGAAAAGCTAGGAAAATTATTC
ACTGCAAAAACGAACCAGGGATAGCCGAAAAAAGCTGAAATCGTTTACCTGAGAGCCGTT
TTGAAGGACATATAAATTTCAAAAAACTTGCATGCTACAAGTGCAAGTAATTGCTTTGTA
AATTAGTTTCTAGTTGGACGATCAGGGACACAAATCATGATGGATAGCAAATTAGGCTAT
TTAAGGCTGCCCAAAGAATTCTGACAGTGTCGAACTAGAGTTAATCAACCCTTGTGAGTC
TAAGAGCAGTCAACTGCAAAAGTGCTTTGGAACAAGCAGTTTTATCAAGATTGAGCAGGA
GAAATACTGCTAATCAATACCAAAATCTGCTAGGAGACAATTTTGGTAGATGAAGCCTAC
ATGGACTCAAATCAAGCCGAGAATTC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919795|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_C05.
(446 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A8FZ95
Definition tr|A8FZ95|A8FZ95_SHESH Putative uncharacterized protein OS=Shewanella sediminis (strain HAW-EB3)
Align length 42
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919795|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_C05.
(446 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8FZ95|A8FZ95_SHESH Putative uncharacterized protein OS=Shewa... 33 7.0

>tr|A8FZ95|A8FZ95_SHESH Putative uncharacterized protein
OS=Shewanella sediminis (strain HAW-EB3) GN=Ssed_3564
PE=4 SV=1
Length = 167

Score = 33.1 bits (74), Expect = 7.0
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Frame = +2

Query: 260 SDSVELELINPCESKSSQ---LQKCFGTSS--FIKIEQEKYC 370
S SV+L + NP ES S Q ++KC + FIK+++EK+C
Sbjct: 115 SSSVKLVMTNPEESSSDQVEFIEKCLAYTGVQFIKLDREKHC 156