BP919639 |
Clone id |
YMU001_000127_D11 |
Library |
YMU01 |
Length |
475 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000127_D11. |
Accession |
BP919639 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1594Contig1 |
Sequence |
GCAAGTGCTTTCAAGTGCATGTGTTTCATAATCCTCTCCTCGTGATAGTTTTGGGGTGTT TCATGGTTTGTTGACATTCAAATGGTACCTCTTGGGTGTAGGTATGGATGGATAGTTCCA GCATACACAATGGCACCTGATGCAGAGCATATATGTCTACTGAGGGTGGTCATGAGGGAG GACTTTAGTTGCACATTAGCCCAACGCCTTGTTGAGGACATCCGCAGAGTTCTAGACTAT CTCGACGCACGGCCACCCAAGCTTGTTGAGGCGGTGGCAGTTGCTATTGCTCAAAAAGAA CCTGAGTTGAAGGAGGATGTGAAACCATCAACTCTTTCAGCCTCACCTGTGTTCAGGGAG GTCATGCTTGCGAAGAACTTTCCCAAGAAGTTTGGCTCGTTCAAAATGAATGGGGTATGT TGAGAGCCAGTGAACCCACTATATTTATGTGGTGCAAGGAGTTGTGGACCTGCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P54767 |
Definition |
sp|P54767|DCE_SOLLC Glutamate decarboxylase OS=Solanum lycopersicum |
Align length |
108 |
Score (bit) |
86.3 |
E-value |
7.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RXP9 |
Definition |
tr|A9RXP9|A9RXP9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
92 |
Score (bit) |
110.0 |
E-value |
3.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919639|Adiantum capillus-veneris mRNA, clone: YMU001_000127_D11. (475 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RXP9|A9RXP9_PHYPA Predicted protein OS=Physcomitrella paten... 110 3e-23 tr|A9SDK9|A9SDK9_PHYPA Predicted protein OS=Physcomitrella paten... 102 1e-20 tr|A0EJ89|A0EJ89_PINPS Glutamate decarboxylase OS=Pinus pinaster... 96 7e-19 tr|A8C8H3|A8C8H3_SOYBN Glutamate decarboxylase OS=Glycine max GN... 93 6e-18 tr|Q7XJB3|Q7XJB3_SOYBN Putative glutamate decarboxylase (Fragmen... 92 2e-17 tr|A8C8H5|A8C8H5_SOYBN Glutamate decarboxylase OS=Glycine max GN... 92 2e-17 tr|A9RGP7|A9RGP7_PHYPA Predicted protein OS=Physcomitrella paten... 89 1e-16 tr|Q8LLP2|Q8LLP2_ORYSJ Putative glutamate carboxylase OS=Oryza s... 88 2e-16 tr|Q6ASV4|Q6ASV4_ORYSJ Os03g0720300 protein OS=Oryza sativa subs... 88 2e-16 tr|B8AQQ2|B8AQQ2_ORYSI Putative uncharacterized protein OS=Oryza... 88 2e-16 tr|B4F972|B4F972_MAIZE Glutamate decarboxylase OS=Zea mays PE=2 ... 88 2e-16 tr|B8AQP6|B8AQP6_ORYSI Putative uncharacterized protein OS=Oryza... 87 3e-16 tr|A0EJ88|A0EJ88_9ROSI Glutamate decarboxylase OS=Populus tremul... 87 4e-16 tr|B1Q3F0|B1Q3F0_SOLLC Glutamate decarboxylase isoform1 OS=Solan... 86 7e-16 tr|A7P433|A7P433_VITVI Chromosome chr1 scaffold_5, whole genome ... 86 9e-16 tr|A5BI27|A5BI27_VITVI Putative uncharacterized protein OS=Vitis... 86 9e-16 tr|A3AM59|A3AM59_ORYSJ Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|Q56W28|Q56W28_ARATH Putative uncharacterized protein At1g6596... 85 2e-15 tr|A7PTR5|A7PTR5_VITVI Chromosome undetermined scaffold_30, whol... 85 2e-15 tr|A9RI73|A9RI73_PHYPA Predicted protein (Fragment) OS=Physcomit... 84 3e-15 tr|Q84U04|Q84U04_ORYSJ Os03g0236200 protein OS=Oryza sativa subs... 84 3e-15 tr|A2XEB3|A2XEB3_ORYSI Putative uncharacterized protein OS=Oryza... 84 3e-15 tr|Q944L6|Q944L6_ARATH At1g65960/F12P19_12 OS=Arabidopsis thalia... 83 6e-15 tr|Q8RXH0|Q8RXH0_ARATH Glutamate decarboxylase, putative OS=Arab... 83 6e-15 tr|Q8LKR4|Q8LKR4_TOBAC Glutamate decarboxylase OS=Nicotiana taba... 83 6e-15 tr|Q9AT17|Q9AT17_TOBAC Glutamate decarboxylase isozyme 1 OS=Nico... 83 8e-15 tr|P93369|P93369_TOBAC Glutamate decarboxylase OS=Nicotiana taba... 83 8e-15 tr|O81102|O81102_TOBAC Glutamate decarboxylase isozyme 1 OS=Nico... 83 8e-15 tr|B1Q3F1|B1Q3F1_SOLLC Glutamate decarboxylase isoform2 OS=Solan... 80 4e-14 tr|B6TT27|B6TT27_MAIZE Glutamate decarboxylase OS=Zea mays PE=2 ... 80 7e-14
>tr|A9RXP9|A9RXP9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_105373 PE=3 SV=1 Length = 533
Score = 110 bits (276), Expect = 3e-23 Identities = 53/92 (57%), Positives = 69/92 (75%), Gaps = 2/92 (2%) Frame = +1
Query: 100 RYGWIVPAYTMAPDAEHICLLRVVMREDFSCTLAQRLVEDIRRVLDYLDARPPKLVEAVA 279 RYGW VPAYTMAPDA+H+ LLRVV+REDFS +LA RLV DI+RVLD+ DARPPKL+E V Sbjct: 401 RYGWTVPAYTMAPDAQHVTLLRVVVREDFSRSLANRLVTDIKRVLDHFDARPPKLIEVVT 460
Query: 280 VAIAQKEPELKEDV--KPSTLSASPVFREVML 369 A+AQ+ E D+ P + A+ F ++++ Sbjct: 461 AAVAQENREANLDLPTTPDAVKATAAFNDIVV 492
>tr|A9SDK9|A9SDK9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_127975 PE=3 SV=1 Length = 518
Score = 102 bits (253), Expect = 1e-20 Identities = 58/125 (46%), Positives = 72/125 (57%), Gaps = 19/125 (15%) Frame = +1
Query: 103 YGWIVPAYTMAPDAEHICLLRVVMREDFSCTLAQRLVEDIRRVLDYLDARPPKLVEAVAV 282 YGW VPAYTMA DA+H+ LLRVV+REDFS +L+ RL+ DI+RVL Y DARP KL+EAV Sbjct: 394 YGWTVPAYTMAADAQHVTLLRVVVREDFSRSLSDRLLTDIKRVLAYFDARPSKLIEAVTA 453
Query: 283 AIAQ--KEPELKEDVKPSTLSASPVFREVMLAK-----------------NFPKKFGSFK 405 A+ + KE L+ P + A+ F V+L KK S K Sbjct: 454 AVVEENKEQHLEMPTTPDAVKATQAFNTVILEHVACKKKHNGHHHSRSRGGHGKKHASPK 513
Query: 406 MNGVC 420 NGVC Sbjct: 514 ANGVC 518
>tr|A0EJ89|A0EJ89_PINPS Glutamate decarboxylase OS=Pinus pinaster PE=2 SV=1 Length = 509
Score = 96.3 bits (238), Expect = 7e-19 Identities = 53/114 (46%), Positives = 72/114 (63%), Gaps = 7/114 (6%) Frame = +1
Query: 100 RYGWIVPAYTMAPDAEHICLLRVVMREDFSCTLAQRLVEDIRRVLDYLDARPPKLVEAVA 279 R+GWIVPAYTMAPDA+ + LLRVV+REDF+ +LA+RLV DI +VL LD P K+ V Sbjct: 396 RFGWIVPAYTMAPDAQEVKLLRVVVREDFNRSLAERLVHDIEKVLHELDTLPSKIAREVV 455
Query: 280 VAIAQKEPELKE----DVKPSTLSASPVFREVMLAKNFP---KKFGSFKMNGVC 420 ++ PELKE + + +S VF E++ ++ KKF + K N VC Sbjct: 456 ASLVDGHPELKEVKDLGIDVTQFKSSAVFNEIVNSQKAVKAWKKFVAQKANRVC 509
>tr|A8C8H3|A8C8H3_SOYBN Glutamate decarboxylase OS=Glycine max GN=GAD PE=2 SV=1 Length = 503
Score = 93.2 bits (230), Expect = 6e-18 Identities = 48/118 (40%), Positives = 70/118 (59%) Frame = +1
Query: 67 FVDIQMVPLGCRYGWIVPAYTMAPDAEHICLLRVVMREDFSCTLAQRLVEDIRRVLDYLD 246 F + Q+ R+GWIVPAYTM PDA+H+ +LRVV+REDFS TLA+RLV D+ +VL LD Sbjct: 386 FDEFQISDFLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVADVEKVLHELD 445
Query: 247 ARPPKLVEAVAVAIAQKEPELKEDVKPSTLSASPVFREVMLAKNFPKKFGSFKMNGVC 420 + P +++ + +V + +E K S + + +K + KMNGVC Sbjct: 446 SLPARVISSTSVTVTAEENGKVVVAKKSAMETQREITAIWKKFVLERKKNNDKMNGVC 503
>tr|Q7XJB3|Q7XJB3_SOYBN Putative glutamate decarboxylase (Fragment) OS=Glycine max GN=GAD PE=2 SV=1 Length = 450
Score = 91.7 bits (226), Expect = 2e-17 Identities = 47/118 (39%), Positives = 70/118 (59%) Frame = +1
Query: 67 FVDIQMVPLGCRYGWIVPAYTMAPDAEHICLLRVVMREDFSCTLAQRLVEDIRRVLDYLD 246 F + Q+ R+GWIVPAYTM PDA+H+ +LRVV+REDFS TLA+RLV D+ +VL LD Sbjct: 333 FDEFQISDFLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVSDVEKVLHELD 392
Query: 247 ARPPKLVEAVAVAIAQKEPELKEDVKPSTLSASPVFREVMLAKNFPKKFGSFKMNGVC 420 + P +++ + V ++ +E K + + + +K + KMNGVC Sbjct: 393 SLPARVISSTTVTLSAEENGKVVVAKKNPMETQREITAIWKKFVLERKKNNDKMNGVC 450
>tr|A8C8H5|A8C8H5_SOYBN Glutamate decarboxylase OS=Glycine max GN=GAD PE=2 SV=1 Length = 503
Score = 91.7 bits (226), Expect = 2e-17 Identities = 47/118 (39%), Positives = 70/118 (59%) Frame = +1
Query: 67 FVDIQMVPLGCRYGWIVPAYTMAPDAEHICLLRVVMREDFSCTLAQRLVEDIRRVLDYLD 246 F + Q+ R+GWIVPAYTM PDA+H+ +LRVV+REDFS TLA+RLV D+ +VL LD Sbjct: 386 FDEFQISDFLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVSDVEKVLHELD 445
Query: 247 ARPPKLVEAVAVAIAQKEPELKEDVKPSTLSASPVFREVMLAKNFPKKFGSFKMNGVC 420 + P +++ + V ++ +E K + + + +K + KMNGVC Sbjct: 446 SLPARVISSTTVTLSAEENGKVVVAKKNPMETQREITAIWKKFVLERKKNNDKMNGVC 503
>tr|A9RGP7|A9RGP7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_174716 PE=3 SV=1 Length = 521
Score = 89.0 bits (219), Expect = 1e-16 Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 15/122 (12%) Frame = +1
Query: 100 RYGWIVPAYTMAPDAEHICLLRVVMREDFSCTLAQRLVEDIRRVLDYLDARPPKLVEAVA 279 R+GW V AYTMAPDA+ LLRVV+REDFS L+ RLVED+++VL LD++P KLV+AVA Sbjct: 400 RHGWTVSAYTMAPDAQQTTLLRVVVREDFSRGLSDRLVEDLKKVLKTLDSQPAKLVQAVA 459
Query: 280 VAIAQKEPELK------EDVKPSTLSASP---VFREVMLAKNFPKKFGSFKM------NG 414 I ++ EL ED+K + P + +++ A N KK + K+ NG Sbjct: 460 EVIQEQHHELANSNATVEDIKQTVEHDVPFHEMVKKLSDAHNHRKKAQAHKLHSIHKTNG 519
Query: 415 VC 420 VC Sbjct: 520 VC 521
>tr|Q8LLP2|Q8LLP2_ORYSJ Putative glutamate carboxylase OS=Oryza sativa subsp. japonica GN=OSJNBa0031O09.06 PE=3 SV=1 Length = 513
Score = 88.2 bits (217), Expect = 2e-16 Identities = 50/111 (45%), Positives = 71/111 (63%), Gaps = 4/111 (3%) Frame = +1
Query: 100 RYGWIVPAYTMAPDAEHICLLRVVMREDFSCTLAQRLVEDIRRVLDYLDARPPKLV---- 267 R+GWIVPAYTM PDA+H+ +LRVV+REDFS TLA+RLV D+ +VL LDA P ++V Sbjct: 418 RFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVLDVEKVLHELDALPARVVANGG 477
Query: 268 EAVAVAIAQKEPELKEDVKPSTLSASPVFREVMLAKNFPKKFGSFKMNGVC 420 +A A + +++E E + +V +++ +LAK K NGVC Sbjct: 478 DAAAASASEREMEKQREV-------ISLWKRAVLAKK--------KTNGVC 513
>tr|Q6ASV4|Q6ASV4_ORYSJ Os03g0720300 protein OS=Oryza sativa subsp. japonica GN=B1377B10.13 PE=3 SV=1 Length = 492
Score = 88.2 bits (217), Expect = 2e-16 Identities = 50/111 (45%), Positives = 71/111 (63%), Gaps = 4/111 (3%) Frame = +1
Query: 100 RYGWIVPAYTMAPDAEHICLLRVVMREDFSCTLAQRLVEDIRRVLDYLDARPPKLV---- 267 R+GWIVPAYTM PDA+H+ +LRVV+REDFS TLA+RLV D+ +VL LDA P ++V Sbjct: 397 RFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVLDVEKVLHELDALPARVVANGG 456
Query: 268 EAVAVAIAQKEPELKEDVKPSTLSASPVFREVMLAKNFPKKFGSFKMNGVC 420 +A A + +++E E + +V +++ +LAK K NGVC Sbjct: 457 DAAAASASEREMEKQREV-------ISLWKRAVLAKK--------KTNGVC 492
>tr|B8AQQ2|B8AQQ2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13319 PE=4 SV=1 Length = 480
Score = 88.2 bits (217), Expect = 2e-16 Identities = 50/111 (45%), Positives = 71/111 (63%), Gaps = 4/111 (3%) Frame = +1
Query: 100 RYGWIVPAYTMAPDAEHICLLRVVMREDFSCTLAQRLVEDIRRVLDYLDARPPKLV---- 267 R+GWIVPAYTM PDA+H+ +LRVV+REDFS TLA+RLV D+ +VL LDA P ++V Sbjct: 385 RFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVLDVEKVLHELDALPARVVANGG 444
Query: 268 EAVAVAIAQKEPELKEDVKPSTLSASPVFREVMLAKNFPKKFGSFKMNGVC 420 +A A + +++E E + +V +++ +LAK K NGVC Sbjct: 445 DAAAASASEREMEKQREV-------ISLWKRAVLAKK--------KTNGVC 480
|