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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919633
Clone id YMU001_000127_D05
Library
Length 548
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000127_D05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTTTTTTTTTTTCAAAACACGGAAAAGGATGGCATATGCCAAAATAGAGTTC
CATAATGCCAGCATGATGATATAGAATTTACAAAGATCGTGTTTACATTATCTGTAATCC
CTCCTATCCCCCCATTTACATCCATCTACTCCCTAGCCATGTCATCTTATCTTATGTGTG
TAAATGCAGAACCTGATTCAAAAGATTGAAGTACCTGCAAATGCTCAAAATGGGATTCGT
AAGTAAACCAACCATGCCCACTCAATGAATCACAGAGACTTCAGTTAATTGGCATGGGGC
TTCGAAAGGTCTTTTTCATCACCATCGGTAATCTGCGCATTTTGTACACTTTCACCTTTT
AGCCTTCTTTCATCACCAGCAACCTTTGCTGCAGACTTCACAAAGTTGCTCGGGTAAAAC
ACCTTGCGGAGCTTCGAGATGGTCCAAGCTGTTGTCAAAAAGCCGCCTACAGCATTGAAA
CCTTGCTGTGTAAATTGTCCAGCCTCACCCCCATACCTTTGTGTTACGAGGCCTGTTGTT
GCAGTTGA
■■Homology search results ■■ -
sp_hit_id Q9P6I9
Definition sp|Q9P6I9|YHDD_SCHPO Uncharacterized transcriptional regulatory protein C1683.13c OS=Schizosaccharomyces pombe
Align length 40
Score (bit) 30.4
E-value 5.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919633|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_D05.
         (528 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9P6I9|YHDD_SCHPO Uncharacterized transcriptional regulatory ...    30   5.5  
sp|P20948|VSY1_TRYCO Variant surface glycoprotein YnAT 1.1 OS=Tr...    30   9.4  

>sp|Q9P6I9|YHDD_SCHPO Uncharacterized transcriptional regulatory
           protein C1683.13c OS=Schizosaccharomyces pombe
           GN=SPBC1683.13c PE=1 SV=1
          Length = 618

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 408 RKVFYPSNFVKSAAKVAGDERRLKGESVQNAQITDGDEKD 289
           R++ +   FVK  AKV  DE+ L  + + N  + +G+E D
Sbjct: 66  RQIAFFEAFVKKLAKVGSDEQSLMIQDMNNKIVNEGNEYD 105


>sp|P20948|VSY1_TRYCO Variant surface glycoprotein YnAT 1.1
           OS=Trypanosoma congolense PE=1 SV=1
          Length = 419

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = +1

Query: 361 NLCCRLHKVARVKHLAELRD-----GPSCCQKAAYSIETLLCKLSSLTP 492
           N  CRL+ +AR     +  D     G + C+K A SIE +  KL+   P
Sbjct: 38  NALCRLYNIARAGEGLKEEDWLPCAGKAACEKTAASIEDVFMKLNFSEP 86
tr_hit_id A7QDV5
Definition tr|A7QDV5|A7QDV5_VITVI Chromosome chr4 scaffold_83, whole genome shotgun sequence OS=Vitis vinifera
Align length 68
Score (bit) 59.3
E-value 1.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919633|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_D05.
         (528 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QDV5|A7QDV5_VITVI Chromosome chr4 scaffold_83, whole genome...    59   1e-07
tr|B5TV63|B5TV63_CAMSI Senescence-related protein OS=Camellia si...    55   3e-06
tr|Q9SD22|Q9SD22_ARATH Putative uncharacterized protein F24M12.2...    54   5e-06
tr|O81657|O81657_HEMSP Senescence-associated protein 12 OS=Hemer...    54   6e-06
tr|A7P8A4|A7P8A4_VITVI Chromosome chr3 scaffold_8, whole genome ...    52   1e-05
tr|Q8SB36|Q8SB36_ORYSA Putative senescence-associated protein OS...    51   3e-05
tr|Q5Z9N6|Q5Z9N6_ORYSJ Os06g0717100 protein OS=Oryza sativa subs...    51   3e-05
tr|B8A0G0|B8A0G0_MAIZE Putative uncharacterized protein OS=Zea m...    51   3e-05
tr|B6UCD3|B6UCD3_MAIZE Senescence-associated protein 12 OS=Zea m...    51   3e-05
tr|A3BFF6|A3BFF6_ORYSJ Putative uncharacterized protein OS=Oryza...    51   3e-05
tr|A2YH10|A2YH10_ORYSI Putative uncharacterized protein OS=Oryza...    51   3e-05
tr|Q94II1|Q94II1_ARATH ERD7 protein (Fragment) OS=Arabidopsis th...    51   4e-05
tr|Q8LA30|Q8LA30_ARATH Putative senescence-associated protein 12...    51   4e-05
tr|Q10P99|Q10P99_ORYSJ Os03g0241900 protein OS=Oryza sativa subs...    51   4e-05
tr|Q10P98|Q10P98_ORYSJ Senescence-associated protein, expressed ...    51   4e-05
tr|O48832|O48832_ARATH Putative senescence-related protein (Prob...    51   4e-05
tr|A2XEE9|A2XEE9_ORYSI Putative uncharacterized protein OS=Oryza...    51   4e-05
tr|B6U1F2|B6U1F2_MAIZE Senescence-associated protein 12 OS=Zea m...    49   2e-04
tr|B4F8T3|B4F8T3_MAIZE Putative uncharacterized protein OS=Zea m...    47   8e-04
tr|Q5JM97|Q5JM97_ORYSJ cDNA clone:001-022-B06, full insert seque...    46   0.001
tr|B8A8R5|B8A8R5_ORYSI Putative uncharacterized protein OS=Oryza...    46   0.001
tr|A2ZXD7|A2ZXD7_ORYSJ Putative uncharacterized protein OS=Oryza...    46   0.001
tr|O65635|O65635_ARATH Putative uncharacterized protein T19K4.11...    46   0.001
tr|A9T5K6|A9T5K6_PHYPA Predicted protein (Fragment) OS=Physcomit...    45   0.002
tr|Q9LVE6|Q9LVE6_ARATH Similarity to senescence-associated prote...    45   0.003
tr|A9TKT2|A9TKT2_PHYPA Predicted protein OS=Physcomitrella paten...    45   0.003
tr|A7PEH2|A7PEH2_VITVI Chromosome chr11 scaffold_13, whole genom...    45   0.003
tr|Q8GY71|Q8GY71_ARATH Putative uncharacterized protein At4g1545...    44   0.005
tr|A9NV63|A9NV63_PICSI Putative uncharacterized protein OS=Picea...    44   0.007
tr|A9RSE9|A9RSE9_PHYPA Predicted protein (Fragment) OS=Physcomit...    42   0.019

>tr|A7QDV5|A7QDV5_VITVI Chromosome chr4 scaffold_83, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036757001
           PE=4 SV=1
          Length = 395

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
 Frame = -1

Query: 528 STATTGLVTQRYGGEAGQFTQQGFNAVGGFLTTAWTISKLRKVFYPSNFVK----SAAKV 361
           ST TTGLV+ RYG +AGQ T  G +A G  +  AW + K+RK F P + +K    +AAK 
Sbjct: 325 STVTTGLVSHRYGEQAGQATNTGLDAAGHAVGAAWAVFKIRKAFNPKSVIKPTSLAAAKA 384

Query: 360 AGDERRLK 337
           A  E+  K
Sbjct: 385 AAAEKVAK 392


>tr|B5TV63|B5TV63_CAMSI Senescence-related protein OS=Camellia
           sinensis PE=2 SV=1
          Length = 448

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = -1

Query: 528 STATTGLVTQRYGGEAGQFTQQGFNAVGGFLTTAWTISKLRKVFYPSNFVK--SAAKVAG 355
           S  TTGLV+QRYG +A + T +GF+A G  +  AW + K+RK   P + +K  + AK A 
Sbjct: 374 SVVTTGLVSQRYGEQAAKVTNEGFDAAGHAIGIAWAVFKIRKALNPKSVIKPTTLAKAAA 433

Query: 354 DERRLKGESVQNAQ 313
           +      ++  N Q
Sbjct: 434 ETNYAALKAKSNKQ 447


>tr|Q9SD22|Q9SD22_ARATH Putative uncharacterized protein F24M12.290
           (AT3g51250/F24M12_290) OS=Arabidopsis thaliana
           GN=F24M12.290 PE=2 SV=1
          Length = 463

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -1

Query: 528 STATTGLVTQRYGGEAGQFTQQGFNAVGGFLTTAWTISKLRKVFYPSNFVK--SAAKVAG 355
           ST TT LV  RYG +A + T +G +A G    TAW   K+RK F P N +K  S AK   
Sbjct: 395 STVTTELVNHRYGTKAAEATNEGLDAAGHAFGTAWVAFKIRKAFNPKNVIKPSSLAKSVS 454

Query: 354 DERRLKG 334
           + +  KG
Sbjct: 455 ELKAKKG 461


>tr|O81657|O81657_HEMSP Senescence-associated protein 12
           OS=Hemerocallis sp. GN=SA12 PE=2 SV=1
          Length = 222

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
 Frame = -1

Query: 528 STATTGLVTQRYGGEAGQFTQQGFNAVGGFLTTAWTISKLRK------VFYPSNFVKSAA 367
           S  TTG+V+ RYG +A + T +GF A G  + TAW++ K+RK         P+   KSA 
Sbjct: 150 SEVTTGVVSHRYGEQAAELTHEGFGAAGHAIGTAWSVFKIRKALNPKGALKPTTIAKSAV 209

Query: 366 KVAGDERRLKGE 331
           K A    R K +
Sbjct: 210 KSAAAGMRAKAK 221


>tr|A7P8A4|A7P8A4_VITVI Chromosome chr3 scaffold_8, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036107001
           PE=4 SV=1
          Length = 410

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
 Frame = -1

Query: 528 STATTGLVTQRYGGEAGQFTQQGFNAVGGFLTTAWTISKLRKVFYPSNFVK--SAAKVAG 355
           S  TTGLV+QRYG +A   T +G  A G  + TAW + K+RK   P +  K    AK A 
Sbjct: 338 SVVTTGLVSQRYGEQAAHVTHEGLGAAGHAIGTAWAVFKIRKALNPKSAFKPTKLAKAAA 397

Query: 354 DERRLKGESVQ 322
           +    K ++ Q
Sbjct: 398 EANSAKLKTKQ 408


>tr|Q8SB36|Q8SB36_ORYSA Putative senescence-associated protein
           OS=Oryza sativa GN=OJ1540_H01.2 PE=4 SV=1
          Length = 419

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
 Frame = -1

Query: 528 STATTGLVTQRYGGEAGQFTQQGFNAVGGFLTTAWTISKLRK------VFYPSNFVKSAA 367
           ST TTGLV+ +YG +A   T +G +A G  + TAW + K+R+      V  P++  KS  
Sbjct: 347 STVTTGLVSHKYGEKAAAATNEGMDAAGHAIGTAWAVFKIRQALNPKSVLKPTSLAKSTI 406

Query: 366 KVAGDERRLK 337
           K A  + R K
Sbjct: 407 KAAAADYRAK 416


>tr|Q5Z9N6|Q5Z9N6_ORYSJ Os06g0717100 protein OS=Oryza sativa subsp.
           japonica GN=P0481E08.41 PE=4 SV=1
          Length = 419

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
 Frame = -1

Query: 528 STATTGLVTQRYGGEAGQFTQQGFNAVGGFLTTAWTISKLRK------VFYPSNFVKSAA 367
           ST TTGLV+ +YG +A   T +G +A G  + TAW + K+R+      V  P++  KS  
Sbjct: 347 STVTTGLVSHKYGEKAAAATNEGMDAAGHAIGTAWAVFKIRQALNPKSVLKPTSLAKSTI 406

Query: 366 KVAGDERRLK 337
           K A  + R K
Sbjct: 407 KAAAADYRAK 416


>tr|B8A0G0|B8A0G0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 415

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 23/54 (42%), Positives = 33/54 (61%)
 Frame = -1

Query: 528 STATTGLVTQRYGGEAGQFTQQGFNAVGGFLTTAWTISKLRKVFYPSNFVKSAA 367
           ST TTGLV+ RYG +A   T +G +A G  + TAW + K+R+   P + +K  A
Sbjct: 341 STVTTGLVSHRYGDKAAAATNEGLDAAGHAIGTAWAVFKIRQALNPKSVLKPTA 394


>tr|B6UCD3|B6UCD3_MAIZE Senescence-associated protein 12 OS=Zea mays
           PE=2 SV=1
          Length = 415

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 23/54 (42%), Positives = 33/54 (61%)
 Frame = -1

Query: 528 STATTGLVTQRYGGEAGQFTQQGFNAVGGFLTTAWTISKLRKVFYPSNFVKSAA 367
           ST TTGLV+ RYG +A   T +G +A G  + TAW + K+R+   P + +K  A
Sbjct: 341 STVTTGLVSHRYGDKAAAATNEGLDAAGHAIGTAWAVFKIRQALNPKSVLKPTA 394


>tr|A3BFF6|A3BFF6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_021778 PE=4 SV=1
          Length = 419

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
 Frame = -1

Query: 528 STATTGLVTQRYGGEAGQFTQQGFNAVGGFLTTAWTISKLRK------VFYPSNFVKSAA 367
           ST TTGLV+ +YG +A   T +G +A G  + TAW + K+R+      V  P++  KS  
Sbjct: 347 STVTTGLVSHKYGEKAAAATNEGMDAAGHAIGTAWAVFKIRQALNPKSVLKPTSLAKSTI 406

Query: 366 KVAGDERRLK 337
           K A  + R K
Sbjct: 407 KAAAADYRAK 416