BP919578
Clone id YMU001_000126_G03
Library
Length 472
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000126_G03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTGTTTTTTTTGAGCAGCTCAAGAAGCTGAATATAGACCAGTTACATGAATACATCTCTT
TAAACTTCACTTCAGCACTGACTAGAGTAGAAAGGCCCATGGGGCTTCCAATCTTGTCAA
ACATAACCTTGCAAGTTCTAGTCAAAGGCTGATTTTCAATAATAGTTCATGCTGCCATTA
TCAGCTCAATACAGCTGCTTATTCTTAGACTTCTCTAGACCCTTCTGGACCACTCCCAGA
AGAAGGCTGCTGTAATCTAATCTAATGATTCTTTGATGAACAACCCACTTGTTACACACC
ACCTGAATTTTGGTGATCAGTGACTAGTTTTTCAACATCTTAAGTGTTAACGGGGAAAAT
CAGCCACAAAAAATCGGCCAAATTCACTAAGCCTCCTCTGCACTTTCTCTATTGAGCTCC
AATGTTGCCTTCAAAACAAACTCTCTCAGATCCAAGACCGCACGCTTTCCTG
■■Homology search results ■■ -
sp_hit_id Q2SN34
Definition sp|Q2SN34|HLDE_HAHCH Bifunctional protein hldE OS=Hahella chejuensis (strain KCTC 2396)
Align length 57
Score (bit) 32.0
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919578|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_G03.
(472 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q2SN34|HLDE_HAHCH Bifunctional protein hldE OS=Hahella chejue... 32 1.4
sp|Q07959|IZH3_YEAST ADIPOR-like receptor IZH3 OS=Saccharomyces ... 30 7.1

>sp|Q2SN34|HLDE_HAHCH Bifunctional protein hldE OS=Hahella
chejuensis (strain KCTC 2396) GN=hldE PE=3 SV=1
Length = 477

Score = 32.0 bits (71), Expect = 1.4
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = -3

Query: 317 ITKIQVVCNKWVVHQRIIRLDYSSLLLGVVQKGLEKSKNKQLY*ADNGSMNYY*KSA 147
ITK++V+ HQ++IR+D+ GV Q+ LEK QL A ++ Y K A
Sbjct: 104 ITKLRVISR----HQQLIRMDFEESFAGVPQEQLEKKVAGQLAGAGALVLSDYGKGA 156


>sp|Q07959|IZH3_YEAST ADIPOR-like receptor IZH3 OS=Saccharomyces
cerevisiae GN=IZH3 PE=1 SV=1
Length = 543

Score = 29.6 bits (65), Expect = 7.1
Identities = 11/32 (34%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Frame = -1

Query: 97 GLSTLVSAEV---KFKEMYSCNWSIFSFLSCS 11
G++ L++A + +F MYSC W++++++S S
Sbjct: 337 GITILITASILTTEFVTMYSCYWAMYTYMSIS 368


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919578|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_G03.
(472 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******