BP919557
Clone id YMU001_000126_E01
Library
Length 507
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000126_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAGAGACAAATATGTGTAGTTGATGGTTTTTGAAGGAAGATGTAGTAGGGCAGTGGCTAT
TACATCAAGAAACAAAGCAACTTGCATATTAGCACCTTTCTAAACCCATCATTAAATGAT
GGGTAGCCTTTCTTTTTTTCAGTATACTTTGGGATGTGTCTAAAACCTCATTTGAGGAAT
TCGACTCTGTATCAATTGCAGATACGAAATTACCATGGGCCAGGTGTGGAAAGGTGTCTA
GTCTCTCAATATCAAACATGATCTCTTTCTGGTTGGCATCTGCAGTGCAGAAACCCCTCA
GCTCTTCTATAGTGTCCGGGTGACGTTTAATACCACAAAAATGCCTTTGGCAACTCATCT
TCATCTTCAAAATTCAAGTTACAGCACCGACAACTTCATTCTTCGTGTATTTACCTCTCA
TGTGGCAGACACGTAGATTGAGTGGGCCTGACTTCAGAGACTTCTTCACCTTCCAGTAAG
TTTTGCACTAAAAGCATCGGAGCTGGC
■■Homology search results ■■ -
sp_hit_id P06792
Definition sp|P06792|VE5_HPV18 Probable protein E5 OS=Human papillomavirus type 18
Align length 33
Score (bit) 32.0
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919557|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_E01.
(507 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P06792|VE5_HPV18 Probable protein E5 OS=Human papillomavirus ... 32 1.7
sp|Q9PBJ4|APAH_XYLFA Bis(5'-nucleosyl)-tetraphosphatase, symmetr... 30 4.9
sp|O43306|ADCY6_HUMAN Adenylate cyclase type 6 OS=Homo sapiens G... 30 6.5

>sp|P06792|VE5_HPV18 Probable protein E5 OS=Human papillomavirus
type 18 GN=E5 PE=3 SV=1
Length = 73

Score = 32.0 bits (71), Expect = 1.7
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Frame = +3

Query: 327 LIPQKCL----WQLIFIFKIQVTAPTTSFFVYL 413
L+P C+ W L+F++ + +T+P T+F VY+
Sbjct: 22 LLPSVCMCAYAWVLVFVYIVVITSPATAFTVYV 54


>sp|Q9PBJ4|APAH_XYLFA Bis(5'-nucleosyl)-tetraphosphatase,
symmetrical OS=Xylella fastidiosa GN=apaH PE=3 SV=1
Length = 292

Score = 30.4 bits (67), Expect = 4.9
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Frame = +2

Query: 182 RLCINCRYEITMGQVWKGV*SLNIKHDLFLVGICSAETPQLFYSVR-----VTFNTTKMP 346
RL N R++ + +W DL G S ET +L YS+R V N
Sbjct: 18 RLLENIRFDPSQDTLW-------FCGDLVNRGGQSLETLRLVYSLRSHSVVVLGNHDLSL 70

Query: 347 LATHLHLQNSSYSTDNFILRVFTSHVADT*IEWA*LQRLLHL 472
LA + + + +LR+ T+ D + W +Q+L+H+
Sbjct: 71 LAIAVRSEEEQRKVNPDLLRIITAEDRDEILTWLRMQKLIHV 112


>sp|O43306|ADCY6_HUMAN Adenylate cyclase type 6 OS=Homo sapiens
GN=ADCY6 PE=1 SV=2
Length = 1168

Score = 30.0 bits (66), Expect = 6.5
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2

Query: 269 LVGICSAETPQLFYSVRVTFNTTKMPLATHLHLQNSSYSTDNFILRVFTSHVA 427
++GIC+ ++ S R F T+ + LHLQ+ + + +L V HVA
Sbjct: 301 VIGICTHYPAEV--SQRQAFQETRGYIQARLHLQHENRQQERLLLSVLPQHVA 351


tr_hit_id A6T0R5
Definition tr|A6T0R5|A6T0R5_JANMA Sensor protein OS=Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis)
Align length 34
Score (bit) 33.5
E-value 6.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919557|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_E01.
(507 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6T0R5|A6T0R5_JANMA Sensor protein OS=Janthinobacterium sp. (... 33 6.0

>tr|A6T0R5|A6T0R5_JANMA Sensor protein OS=Janthinobacterium sp.
(strain Marseille) (Minibacterium massiliensis)
GN=mma_2422 PE=4 SV=1
Length = 587

Score = 33.5 bits (75), Expect = 6.0
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -3

Query: 199 AIDTESNSSNEVLDTSQSILKKRKATHHLMMGLE 98
+++++ S NEV+DTS+S+L HH+MM +E
Sbjct: 428 SLESKPVSLNEVIDTSRSLLGNLAIKHHVMMAIE 461