BP919547 |
Clone id |
YMU001_000126_D03 |
Library |
YMU01 |
Length |
369 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000126_D03. |
Accession |
BP919547 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL894Contig1 |
Sequence |
GGTTTTAAATTTTTCCCTCCAAACTCTTATCTCATATTTTCAATCATACACGTCGCTTGT ACCACTCTGTGATCTGCCATTCGCACTTTAAAGGGTGCTGGCTTGAGATTCGTGATACCC AGTCTCTGTTGGAGATGAACTCCCATTATGTTGACTCCTGCTCCTCCATCCAAGATAACA CTTGAGAGAGGTTCCCACTGCTTCCTAACCTTGTAGTCCACTTGAATGAGTGGAACTTAA TCATATCGGACGGCCGTCAGGTCCACTGTTCTGGCCTCCGCCTCAGCTTTCCTGCGCTGT CTGATAAAGTTAGCCACTTCAGGCAAGGTTTTTATGATATCCTCCAGCTCTACAATCAAC TTCTGAATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A9WH12 |
Definition |
sp|A9WH12|RPOB_CHLAA DNA-directed RNA polymerase subunit beta OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) |
Align length |
73 |
Score (bit) |
32.0 |
E-value |
0.98 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5B5K3 |
Definition |
tr|A5B5K3|A5B5K3_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
122 |
Score (bit) |
39.3 |
E-value |
0.099 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919547|Adiantum capillus-veneris mRNA, clone: YMU001_000126_D03. (369 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5B5K3|A5B5K3_VITVI Putative uncharacterized protein OS=Vitis... 39 0.099 tr|A5AMM4|A5AMM4_VITVI Putative uncharacterized protein OS=Vitis... 39 0.099 tr|A5AM19|A5AM19_VITVI Putative uncharacterized protein OS=Vitis... 39 0.13 tr|A9REB0|A9REB0_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.22 tr|A5C9C9|A5C9C9_VITVI Putative uncharacterized protein OS=Vitis... 38 0.22 tr|A5BXM3|A5BXM3_VITVI Putative uncharacterized protein OS=Vitis... 38 0.22 tr|A5C104|A5C104_VITVI Putative uncharacterized protein OS=Vitis... 38 0.29 tr|A5AKF5|A5AKF5_VITVI Putative uncharacterized protein OS=Vitis... 38 0.29 tr|A9RE88|A9RE88_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.38 tr|A5C5F5|A5C5F5_VITVI Putative uncharacterized protein OS=Vitis... 37 0.38 tr|A5BX61|A5BX61_VITVI Putative uncharacterized protein OS=Vitis... 37 0.38 tr|A5AQU2|A5AQU2_VITVI Putative uncharacterized protein OS=Vitis... 37 0.49 tr|A5ACK9|A5ACK9_VITVI Putative uncharacterized protein OS=Vitis... 37 0.49 tr|A5B8R3|A5B8R3_VITVI Putative uncharacterized protein OS=Vitis... 37 0.64 tr|A5B2Y5|A5B2Y5_VITVI Putative uncharacterized protein OS=Vitis... 37 0.64 tr|A5AWB6|A5AWB6_VITVI Putative uncharacterized protein OS=Vitis... 37 0.64 tr|A5AUP9|A5AUP9_VITVI Putative uncharacterized protein OS=Vitis... 37 0.64 tr|A5C748|A5C748_VITVI Putative uncharacterized protein OS=Vitis... 36 0.84 tr|A5C1Z8|A5C1Z8_VITVI Putative uncharacterized protein OS=Vitis... 36 0.84 tr|A5B402|A5B402_VITVI Putative uncharacterized protein OS=Vitis... 36 0.84 tr|A5AWH0|A5AWH0_VITVI Putative uncharacterized protein OS=Vitis... 36 0.84 tr|A5ASL2|A5ASL2_VITVI Putative uncharacterized protein OS=Vitis... 36 0.84 tr|A7PFG5|A7PFG5_VITVI Chromosome chr11 scaffold_14, whole genom... 36 1.1 tr|A5C706|A5C706_VITVI Putative uncharacterized protein OS=Vitis... 36 1.1 tr|A5C4R5|A5C4R5_VITVI Putative uncharacterized protein OS=Vitis... 36 1.1 tr|A5C1L7|A5C1L7_VITVI Putative uncharacterized protein OS=Vitis... 36 1.1 tr|A5C0H6|A5C0H6_VITVI Putative uncharacterized protein OS=Vitis... 36 1.1 tr|A5BXL5|A5BXL5_VITVI Putative uncharacterized protein OS=Vitis... 36 1.1 tr|A5B595|A5B595_VITVI Putative uncharacterized protein OS=Vitis... 36 1.1 tr|A5B066|A5B066_VITVI Putative uncharacterized protein OS=Vitis... 36 1.1
>tr|A5B5K3|A5B5K3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012731 PE=4 SV=1 Length = 1453
Score = 39.3 bits (90), Expect = 0.099 Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 12/122 (9%) Frame = -2
Query: 362 KLIVELEDIIKTLPEVANFIRQ----RRKAEAEAR---TVDLTAVRYD*VPLIQVD---- 216 K+ + L DIIK +P A F++ +R + T ++A+ PL D Sbjct: 339 KVNIPLLDIIKQVPTYAKFLKDLCTIKRGLTVNKKAFLTEQVSAILQCKSPLKYKDPGSP 398
Query: 215 -YKVRKQWEPLSSVILDGGAGVNIMGVHLQQRLGITNLKPAPFKVRMADHRVVQATCMIE 39 V + + + V+LD GA VN++ + ++LG+ LKP + +AD V +IE Sbjct: 399 TISVMIRGKVVEKVLLDLGASVNLLPYSVYKQLGLGELKPTEITLSLADRSVKILRAVIE 458
Query: 38 NM 33 ++ Sbjct: 459 DV 460
>tr|A5AMM4|A5AMM4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005996 PE=4 SV=1 Length = 2056
Score = 39.3 bits (90), Expect = 0.099 Identities = 28/110 (25%), Positives = 52/110 (47%) Frame = -2
Query: 362 KLIVELEDIIKTLPEVANFIRQRRKAEAEARTVDLTAVRYD*VPLIQVDYKVRKQWEPLS 183 K+ + L D+IK +P A F++ DL ++ + V+ K + + Sbjct: 533 KVNIPLLDMIKQVPTYAKFLK------------DLCTIKRG----LNVNKKASLTEQVME 576
Query: 182 SVILDGGAGVNIMGVHLQQRLGITNLKPAPFKVRMADHRVVQATCMIENM 33 +LD GA VN++ + ++LG+ LKP + +AD V +IE++ Sbjct: 577 KALLDLGASVNLLPYSVYKQLGLGELKPTSITLSLADRSVKIPKGVIEDV 626
>tr|A5AM19|A5AM19_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003208 PE=4 SV=1 Length = 1889
Score = 38.9 bits (89), Expect = 0.13 Identities = 28/110 (25%), Positives = 52/110 (47%) Frame = -2
Query: 362 KLIVELEDIIKTLPEVANFIRQRRKAEAEARTVDLTAVRYD*VPLIQVDYKVRKQWEPLS 183 K+ + L D+IK +P A F++ DL ++ + V+ K + + Sbjct: 848 KVNIPLLDMIKQVPSYAKFLK------------DLCTIKRG----LNVNKKALLTEQVVE 891
Query: 182 SVILDGGAGVNIMGVHLQQRLGITNLKPAPFKVRMADHRVVQATCMIENM 33 +LD GA VN++ + ++LG+ LKP + +AD V +IE++ Sbjct: 892 KALLDLGASVNLLPYSVYKQLGLGELKPTSITLSLADRSVKIPRGIIEDV 941
>tr|A9REB0|A9REB0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_64990 PE=4 SV=1 Length = 494
Score = 38.1 bits (87), Expect = 0.22 Identities = 17/40 (42%), Positives = 25/40 (62%) Frame = -2
Query: 188 LSSVILDGGAGVNIMGVHLQQRLGITNLKPAPFKVRMADH 69 +S V +DGG+ VN+M V + L + +L P +RMADH Sbjct: 435 ISDVQVDGGSNVNLMNVDIMDALDLEHLVPMTLVLRMADH 474
>tr|A5C9C9|A5C9C9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039016 PE=4 SV=1 Length = 2029
Score = 38.1 bits (87), Expect = 0.22 Identities = 29/110 (26%), Positives = 51/110 (46%) Frame = -2
Query: 362 KLIVELEDIIKTLPEVANFIRQRRKAEAEARTVDLTAVRYD*VPLIQVDYKVRKQWEPLS 183 K+ + L D+IK +P A F++ ++ + D P I V+ + Sbjct: 731 KVNIPLLDMIKQVPTYAKFLKDLCTCKSPVKYKDPGC------PTISVNIGGTH----VE 780
Query: 182 SVILDGGAGVNIMGVHLQQRLGITNLKPAPFKVRMADHRVVQATCMIENM 33 +LD GA VN++ + ++LG+ LKP + +AD V +IEN+ Sbjct: 781 KALLDLGASVNLLPYSVYKQLGLGELKPTAITLSLADRSVKILRGVIENV 830
>tr|A5BXM3|A5BXM3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030274 PE=4 SV=1 Length = 906
Score = 38.1 bits (87), Expect = 0.22 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 11/121 (9%) Frame = -2
Query: 362 KLIVELEDIIKTLPEVANF------IRQRRKAEAEARTVDLTAVRYD*VPLIQVD----- 216 K+ + L D+IK +P A F I++R + T ++A+ PL D Sbjct: 161 KVNIPLLDMIKQVPTYAKFVKDLCTIKRRLNVNKKFLTEQVSAIIQFKSPLKYKDPGCPT 220
Query: 215 YKVRKQWEPLSSVILDGGAGVNIMGVHLQQRLGITNLKPAPFKVRMADHRVVQATCMIEN 36 V + + +LD GA VN++ + ++LG+ LKP + +AD V +IE+ Sbjct: 221 ISVMIRGTVVEKALLDLGASVNLLPYSVYKQLGLGELKPTSITLSLADRSVKIPRGIIED 280
Query: 35 M 33 + Sbjct: 281 V 281
>tr|A5C104|A5C104_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036969 PE=4 SV=1 Length = 444
Score = 37.7 bits (86), Expect = 0.29 Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 2/112 (1%) Frame = -2
Query: 362 KLIVELEDIIKTLPEVANFIRQRRKAEAEARTVDLTAVRYD*VPLIQVDYK--VRKQWEP 189 K+ + L D+IK +P A F++ DL ++ + V+ K + +Q + Sbjct: 273 KVNIPLLDMIKQVPTYAKFLK------------DLCTIKRG----LNVNKKAFLTEQGKL 316
Query: 188 LSSVILDGGAGVNIMGVHLQQRLGITNLKPAPFKVRMADHRVVQATCMIENM 33 + +LD GA VN++ + ++LG+ LKP + +AD + MIE++ Sbjct: 317 VEKALLDLGASVNLLPYSVYKQLGLGELKPTSITLSLADRSMKIRRGMIEDV 368
>tr|A5AKF5|A5AKF5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032725 PE=4 SV=1 Length = 1662
Score = 37.7 bits (86), Expect = 0.29 Identities = 28/110 (25%), Positives = 52/110 (47%) Frame = -2
Query: 362 KLIVELEDIIKTLPEVANFIRQRRKAEAEARTVDLTAVRYD*VPLIQVDYKVRKQWEPLS 183 K+ + L D+IK +P A F++ DL ++ + V+ K + + Sbjct: 530 KVNIPLLDMIKQVPTYAKFLK------------DLCTIKRG----LTVNKKAFLTEQVVE 573
Query: 182 SVILDGGAGVNIMGVHLQQRLGITNLKPAPFKVRMADHRVVQATCMIENM 33 +LD GA VN++ + ++LG+ LKP + +AD V +IE++ Sbjct: 574 KALLDLGASVNLLPYSVYKQLGLGELKPTAITLSLADRSVKIPRGVIEDV 623
>tr|A9RE88|A9RE88_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_64955 PE=4 SV=1 Length = 570
Score = 37.4 bits (85), Expect = 0.38 Identities = 17/40 (42%), Positives = 24/40 (60%) Frame = -2
Query: 188 LSSVILDGGAGVNIMGVHLQQRLGITNLKPAPFKVRMADH 69 +S V +DGG+ VN+M V + L + L P +RMADH Sbjct: 382 ISGVQVDGGSSVNLMNVDTMEDLDLKQLLPTTLVLRMADH 421
>tr|A5C5F5|A5C5F5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004007 PE=4 SV=1 Length = 716
Score = 37.4 bits (85), Expect = 0.38 Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 12/122 (9%) Frame = -2
Query: 362 KLIVELEDIIKTLPEVANFIRQRRKAEAEARTVDLTAVRYD*VPLIQVDYKVRKQ----- 198 K+I+ L D+IK +P A F++ + + +IQ Y ++ + Sbjct: 542 KVIIPLLDMIKQVPSYAKFLKDLCTIKRGLNVNKKAFLTEQVSAIIQCKYPLKYKDPGCP 601
Query: 197 -------WEPLSSVILDGGAGVNIMGVHLQQRLGITNLKPAPFKVRMADHRVVQATCMIE 39 + + +LD GA VN++ + ++LG+ LKP + +AD V +IE Sbjct: 602 TILVMIGGKVVEKALLDLGASVNLLPYSVYKQLGLGELKPTSITLSLADRSVKIPRGIIE 661
Query: 38 NM 33 ++ Sbjct: 662 DV 663
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