BP919529 |
Clone id |
YMU001_000126_B08 |
Library |
YMU01 |
Length |
462 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000126_B08. |
Accession |
BP919529 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2310Contig1 |
Sequence |
ATCTGAAGCTCGACTATCGTCAATGGGTACACACGATATCGTTATGTCAGCATCACTATC CTTGTGCTTCTGGACGAAGTCCATGTAATCCATACGATATAGGTGATCTCCTGAAAGGAT CAGGACATGCTCAAATACTGTATTCTTGGCATCCTCAGATAACCATGTGAACTGTCGCAC AGCATCCGGTGTGCCCTGGAACCAGCTCATTCCTGCCTCTCCAGGTCTTTGAGTAGCTGC CAACACCTCGACAAAGCCATCACCAAAGTTCACACCATTGCCAAAGTTGTAAGTCCGTGC AAGGTGCCGATTTAATGAAGTAGAATTGAATTGTGTTAAAATAAAAACTTTCTTAATCCC AGAGTTGATGCAGTTGCTCATGGGCACATCAATCAACCTGTATGCACCCCCAATAGGTAC TGCTGGCTTCGCACGTCGCTTTGTAAGAGGAAACAACCGTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P55233 |
Definition |
sp|P55233|GLGL1_BETVU Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris |
Align length |
154 |
Score (bit) |
228.0 |
E-value |
1.0e-59 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919529|Adiantum capillus-veneris mRNA, clone: YMU001_000126_B08. (462 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P55233|GLGL1_BETVU Glucose-1-phosphate adenylyltransferase la... 228 1e-59 sp|P55230|GLGL2_ARATH Glucose-1-phosphate adenylyltransferase la... 227 2e-59 sp|P55229|GLGL1_ARATH Glucose-1-phosphate adenylyltransferase la... 225 8e-59 sp|P55243|GLGL3_SOLTU Glucose-1-phosphate adenylyltransferase la... 221 2e-57 sp|P55231|GLGL3_ARATH Glucose-1-phosphate adenylyltransferase la... 213 2e-55 sp|Q9SIK1|GLGL4_ARATH Probable glucose-1-phosphate adenylyltrans... 211 1e-54 sp|P55242|GLGL2_SOLTU Glucose-1-phosphate adenylyltransferase la... 209 5e-54 sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase la... 207 1e-53 sp|P55234|GLGL2_MAIZE Glucose-1-phosphate adenylyltransferase la... 197 2e-50 sp|P12299|GLGL2_WHEAT Glucose-1-phosphate adenylyltransferase la... 195 9e-50 sp|P30524|GLGL1_HORVU Glucose-1-phosphate adenylyltransferase la... 193 3e-49 sp|P12300|GLGL3_WHEAT Glucose-1-phosphate adenylyltransferase la... 190 3e-48 sp|P55241|GLGL1_MAIZE Glucose-1-phosphate adenylyltransferase la... 181 2e-45 sp|P23509|GLGS_SOLTU Glucose-1-phosphate adenylyltransferase sma... 177 2e-44 sp|P52416|GLGS1_VICFA Glucose-1-phosphate adenylyltransferase sm... 177 3e-44 sp|P52417|GLGS2_VICFA Glucose-1-phosphate adenylyltransferase sm... 176 3e-44 sp|P55238|GLGS_HORVU Glucose-1-phosphate adenylyltransferase sma... 176 6e-44 sp|P55232|GLGS_BETVU Glucose-1-phosphate adenylyltransferase sma... 176 6e-44 sp|P55228|GLGS_ARATH Glucose-1-phosphate adenylyltransferase sma... 176 6e-44 sp|Q42882|GLGS_SOLLC Glucose-1-phosphate adenylyltransferase sma... 175 8e-44 sp|Q3MBJ4|GLGC_ANAVT Glucose-1-phosphate adenylyltransferase OS=... 174 1e-43 sp|P30521|GLGC_ANASP Glucose-1-phosphate adenylyltransferase OS=... 174 1e-43 sp|Q9M462|GLGS_BRANA Glucose-1-phosphate adenylyltransferase sma... 174 2e-43 sp|P15280|GLGS_ORYSJ Glucose-1-phosphate adenylyltransferase sma... 174 2e-43 sp|P30523|GLGS_WHEAT Glucose-1-phosphate adenylyltransferase sma... 173 3e-43 sp|Q5N3K9|GLGC_SYNP6 Glucose-1-phosphate adenylyltransferase OS=... 171 1e-42 sp|Q31QN4|GLGC_SYNE7 Glucose-1-phosphate adenylyltransferase OS=... 171 1e-42 sp|P52415|GLGC_SYNY3 Glucose-1-phosphate adenylyltransferase OS=... 164 2e-40 sp|A5GLA9|GLGC_SYNPW Glucose-1-phosphate adenylyltransferase OS=... 155 1e-37 sp|Q87HX3|GLGC2_VIBPA Glucose-1-phosphate adenylyltransferase 2 ... 122 8e-28
>sp|P55233|GLGL1_BETVU Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris GN=AGPS1 PE=2 SV=1 Length = 522
Score = 228 bits (580), Expect = 1e-59 Identities = 111/154 (72%), Positives = 123/154 (79%) Frame = -1
Query: 462 TRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGIKKVFILTQFNSTSLNRHLARTYXX 283 TRLFPLT RRAKPAVPIGG YRLIDVPMSNCINSGI+K+FILTQFNS SLNRHLARTY Sbjct: 100 TRLFPLTSRRAKPAVPIGGCYRLIDVPMSNCINSGIRKIFILTQFNSFSLNRHLARTYNF 159
Query: 282 XXXXXXXXXXXXVLAATQRPGEAGMSWFQGTPDAVRQFTWLSEDAKNTVFEHVLILSGDH 103 V AATQ PGE+G WFQGT DAVRQF W ED+K+ EH++ILSGDH Sbjct: 160 GDGVNFGDGFVEVFAATQTPGESGKKWFQGTADAVRQFFWAFEDSKSKDVEHIVILSGDH 219
Query: 102 LYRMDYMDFVQKHKDSDADITISCVPIDDSRASD 1 LYRMDYM F QKH D++ADIT+SC+P+DDSRASD Sbjct: 220 LYRMDYMSFWQKHIDTNADITVSCIPMDDSRASD 253
>sp|P55230|GLGL2_ARATH Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic OS=Arabidopsis thaliana GN=APL2 PE=2 SV=2 Length = 518
Score = 227 bits (579), Expect = 2e-59 Identities = 111/154 (72%), Positives = 125/154 (81%) Frame = -1
Query: 462 TRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGIKKVFILTQFNSTSLNRHLARTYXX 283 TRLFPLT +RAKPAVPIGG YRLID+PMSNCINSGI+K+FILTQFNS SLNRHL+RTY Sbjct: 96 TRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCINSGIRKIFILTQFNSFSLNRHLSRTYNF 155
Query: 282 XXXXXXXXXXXXVLAATQRPGEAGMSWFQGTPDAVRQFTWLSEDAKNTVFEHVLILSGDH 103 VLAATQ G+AG WFQGT DAVRQF W+ EDAK EHVLILSGDH Sbjct: 156 GNGVNFGDGFVEVLAATQTSGDAGKKWFQGTADAVRQFIWVFEDAKTKNVEHVLILSGDH 215
Query: 102 LYRMDYMDFVQKHKDSDADITISCVPIDDSRASD 1 LYRMDYM+FVQKH +S+ADIT+SC+P+D+SRASD Sbjct: 216 LYRMDYMNFVQKHIESNADITVSCLPMDESRASD 249
>sp|P55229|GLGL1_ARATH Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic OS=Arabidopsis thaliana GN=ADG2 PE=2 SV=3 Length = 522
Score = 225 bits (573), Expect = 8e-59 Identities = 113/154 (73%), Positives = 122/154 (79%) Frame = -1
Query: 462 TRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGIKKVFILTQFNSTSLNRHLARTYXX 283 TRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGI KV+ILTQ+NS SLNRHLAR Y Sbjct: 101 TRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNS 160
Query: 282 XXXXXXXXXXXXVLAATQRPGEAGMSWFQGTPDAVRQFTWLSEDAKNTVFEHVLILSGDH 103 LAATQ PGE+G WFQGT DAVRQF WL EDA++ E VLILSGDH Sbjct: 161 NGLGFGDGYVEV-LAATQTPGESGKRWFQGTADAVRQFHWLFEDARSKDIEDVLILSGDH 219
Query: 102 LYRMDYMDFVQKHKDSDADITISCVPIDDSRASD 1 LYRMDYMDF+Q H+ S ADI+ISC+PIDD RASD Sbjct: 220 LYRMDYMDFIQDHRQSGADISISCIPIDDRRASD 253
>sp|P55243|GLGL3_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS3 PE=2 SV=1 Length = 483
Score = 221 bits (562), Expect = 2e-57 Identities = 112/154 (72%), Positives = 120/154 (77%) Frame = -1
Query: 462 TRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGIKKVFILTQFNSTSLNRHLARTYXX 283 TRLFPLTKRRAKPAVP+GGAYRLIDVPMSNCINSGI KV+ILTQFNS SLNRH+AR Y Sbjct: 60 TRLFPLTKRRAKPAVPMGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHIARAYNF 119
Query: 282 XXXXXXXXXXXXVLAATQRPGEAGMSWFQGTPDAVRQFTWLSEDAKNTVFEHVLILSGDH 103 VLAATQ PGE G WFQGT AVRQF WL EDA++ E VLILSGDH Sbjct: 120 GNGVTFESGYVEVLAATQTPGELGKRWFQGTAHAVRQFHWLFEDARSKDIEDVLILSGDH 179
Query: 102 LYRMDYMDFVQKHKDSDADITISCVPIDDSRASD 1 LYRMDY+ FVQ H+ S ADITIS +PIDDSRASD Sbjct: 180 LYRMDYLHFVQSHRQSGADITISSLPIDDSRASD 213
>sp|P55231|GLGL3_ARATH Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic OS=Arabidopsis thaliana GN=APL3 PE=2 SV=2 Length = 521
Score = 213 bits (543), Expect = 2e-55 Identities = 103/153 (67%), Positives = 119/153 (77%) Frame = -1
Query: 459 RLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGIKKVFILTQFNSTSLNRHLARTYXXX 280 +LFPLTKR A PAVP+GG YR+ID+PMSNCINS I K+F+LTQFNS SLNRHLARTY Sbjct: 101 KLFPLTKRAATPAVPVGGCYRMIDIPMSNCINSCINKIFVLTQFNSASLNRHLARTYFGN 160
Query: 279 XXXXXXXXXXXVLAATQRPGEAGMSWFQGTPDAVRQFTWLSEDAKNTVFEHVLILSGDHL 100 LAATQ PGEAG WFQGT DAVR+F W+ EDAKN E+++ILSGDHL Sbjct: 161 GINFGDGFVEV-LAATQTPGEAGKKWFQGTADAVRKFLWVFEDAKNRNIENIIILSGDHL 219
Query: 99 YRMDYMDFVQKHKDSDADITISCVPIDDSRASD 1 YRM+YMDFVQ H DS ADIT+SC P+D+SRAS+ Sbjct: 220 YRMNYMDFVQHHVDSKADITLSCAPVDESRASE 252
>sp|Q9SIK1|GLGL4_ARATH Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplastic OS=Arabidopsis thaliana GN=At2g21590 PE=2 SV=1 Length = 523
Score = 211 bits (537), Expect = 1e-54 Identities = 103/153 (67%), Positives = 118/153 (77%) Frame = -1
Query: 459 RLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGIKKVFILTQFNSTSLNRHLARTYXXX 280 +LFPLT R A PAVP+GG YRLID+PMSNCINS I K+F+LTQFNS SLNRHLARTY Sbjct: 103 KLFPLTMRAATPAVPVGGCYRLIDIPMSNCINSCINKIFVLTQFNSASLNRHLARTYFGN 162
Query: 279 XXXXXXXXXXXVLAATQRPGEAGMSWFQGTPDAVRQFTWLSEDAKNTVFEHVLILSGDHL 100 LAATQ PGEAG WFQGT DAVR+F W+ EDAKN E++LILSGDHL Sbjct: 163 GINFGGGFVEV-LAATQTPGEAGKKWFQGTADAVRKFLWVFEDAKNRNIENILILSGDHL 221
Query: 99 YRMDYMDFVQKHKDSDADITISCVPIDDSRASD 1 YRM+YMDFVQ H DS+ADIT+SC P+ +SRAS+ Sbjct: 222 YRMNYMDFVQSHVDSNADITLSCAPVSESRASN 254
>sp|P55242|GLGL2_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS2 PE=2 SV=1 Length = 519
Score = 209 bits (532), Expect = 5e-54 Identities = 106/154 (68%), Positives = 119/154 (77%) Frame = -1
Query: 462 TRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGIKKVFILTQFNSTSLNRHLARTYXX 283 TRLFPLT RRAKPAVPIGG YRLIDVPMSNCINSGI+K+FILTQFNS SLNRHLA TY Sbjct: 99 TRLFPLTSRRAKPAVPIGGCYRLIDVPMSNCINSGIRKIFILTQFNSFSLNRHLA-TYNF 157
Query: 282 XXXXXXXXXXXXVLAATQRPGEAGMSWFQGTPDAVRQFTWLSEDAKNTVFEHVLILSGDH 103 VLA TQ PG+ WFQ DAVR+F W+ E+ KN EH++ILSGDH Sbjct: 158 GNGVGFGDGFVEVLAGTQTPGDGRKMWFQAA-DAVREFIWVFENQKNKNVEHIIILSGDH 216
Query: 102 LYRMDYMDFVQKHKDSDADITISCVPIDDSRASD 1 LYRM+YMDFVQKH D++ADIT+SCVP+DD RASD Sbjct: 217 LYRMNYMDFVQKHIDTNADITVSCVPMDDGRASD 250
>sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment) OS=Solanum tuberosum GN=AGPS1 PE=2 SV=1 Length = 470
Score = 207 bits (528), Expect = 1e-53 Identities = 99/154 (64%), Positives = 116/154 (75%) Frame = -1
Query: 462 TRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGIKKVFILTQFNSTSLNRHLARTYXX 283 T+LFPLT R A PAVP+GG YRLID+PMSNCINS I K+F+LTQ+NS LNRH+ARTY Sbjct: 49 TKLFPLTSRTATPAVPVGGCYRLIDIPMSNCINSAINKIFVLTQYNSAPLNRHIARTYFG 108
Query: 282 XXXXXXXXXXXXVLAATQRPGEAGMSWFQGTPDAVRQFTWLSEDAKNTVFEHVLILSGDH 103 LAATQ PGEAG WFQGT DAVR+F W+ EDAKN E++++LSGDH Sbjct: 109 NGVSFGDGFVEV-LAATQTPGEAGKKWFQGTADAVRKFIWVFEDAKNKNIENIVVLSGDH 167
Query: 102 LYRMDYMDFVQKHKDSDADITISCVPIDDSRASD 1 LYRMDYM+ VQ H D +ADIT+SC P +DSRASD Sbjct: 168 LYRMDYMELVQNHIDRNADITLSCAPAEDSRASD 201
>sp|P55234|GLGL2_MAIZE Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Zea mays GN=AGP2 PE=2 SV=1 Length = 521
Score = 197 bits (500), Expect = 2e-50 Identities = 100/155 (64%), Positives = 115/155 (74%), Gaps = 1/155 (0%) Frame = -1
Query: 462 TRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGIKKVFILTQFNSTSLNRHLARTYXX 283 T+LFPLT RA PAVPIGG YRLID+PMSNC NSGI K+F++TQFNS SLNRH+ RTY Sbjct: 98 TQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY-L 156
Query: 282 XXXXXXXXXXXXVLAATQRPGEAGMSWFQGTPDAVRQFTWLSED-AKNTVFEHVLILSGD 106 VLAATQ PGEA WFQGT DAVR+F W+ ED K+ EH+LILSGD Sbjct: 157 GGGINFTDGSVEVLAATQMPGEAA-GWFQGTADAVRKFIWVLEDYYKHKAIEHILILSGD 215
Query: 105 HLYRMDYMDFVQKHKDSDADITISCVPIDDSRASD 1 LYRMDYM+ VQKH D +ADIT+SC P+ +SRASD Sbjct: 216 QLYRMDYMELVQKHVDDNADITLSCAPVGESRASD 250
>sp|P12299|GLGL2_WHEAT Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Triticum aestivum GN=AGP-L PE=2 SV=2 Length = 522
Score = 195 bits (495), Expect = 9e-50 Identities = 99/155 (63%), Positives = 115/155 (74%), Gaps = 1/155 (0%) Frame = -1
Query: 462 TRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGIKKVFILTQFNSTSLNRHLARTYXX 283 T+LFPLT RA PAVPIGG YRLID+PMSNC NSGI K+F++TQFNS SLNRH+ RTY Sbjct: 101 TQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY-L 159
Query: 282 XXXXXXXXXXXXVLAATQRPGEAGMSWFQGTPDAVRQFTWLSED-AKNTVFEHVLILSGD 106 VLAATQ PGEA WF+GT DAVR+F W+ ED KN EH+LILSGD Sbjct: 160 GGGINFTDGSVEVLAATQMPGEAA-GWFRGTADAVRKFIWVLEDYYKNKSIEHILILSGD 218
Query: 105 HLYRMDYMDFVQKHKDSDADITISCVPIDDSRASD 1 LYRMDYM+ VQKH D +ADIT+SC P+ +SRAS+ Sbjct: 219 QLYRMDYMELVQKHVDDNADITLSCAPVGESRASE 253
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T6T4 |
Definition |
tr|A9T6T4|A9T6T4_PHYPA Glucose-1-phosphate adenylyltransferase OS=Physcomitrella patens subsp. patens |
Align length |
154 |
Score (bit) |
249.0 |
E-value |
4.0e-65 |
Report |
|